RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 WDR19Q8NEZ3 1342 aa11.25□□□□□ -0.61
LINC01539-201ENST00000587904 ZNF532Q9HCE3 1301 aa11.25□□□□□ -0.61
LINC01539-201ENST00000587904 TCRBV5S4A2TA0A5A2 114 aa11.24□□□□□ -0.61
LINC01539-201ENST00000587904 GUCY2CP25092 1073 aa11.24□□□□□ -0.61
LINC01539-201ENST00000587904 RPS8P62241 208 aaKnown RBP11.24□□□□□ -0.61
LINC01539-201ENST00000587904 CAVIN4Q5BKX8 364 aa11.24□□□□□ -0.61
LINC01539-201ENST00000587904 MCTP1Q6DN14 999 aa11.24□□□□□ -0.61
LINC01539-201ENST00000587904 TMED8Q6PL24 325 aaPredicted RBP11.24□□□□□ -0.61
LINC01539-201ENST00000587904 STOX1Q6ZVD7 989 aa11.24□□□□□ -0.61
LINC01539-201ENST00000587904 ZBTB9Q96C00 473 aa11.24□□□□□ -0.61
LINC01539-201ENST00000587904 MINPP1Q9UNW1 487 aa11.24□□□□□ -0.61
LINC01539-201ENST00000587904 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.24□□□□□ -0.61
LINC01539-201ENST00000587904 FOXP2O15409 715 aa11.24□□□□□ -0.61
LINC01539-201ENST00000587904 STX6O43752 255 aa11.24□□□□□ -0.61
LINC01539-201ENST00000587904 ZSCAN22P10073 491 aaPredicted RBP11.24□□□□□ -0.61
LINC01539-201ENST00000587904 RXRBP28702 533 aa11.24□□□□□ -0.61
LINC01539-201ENST00000587904 RBM6P78332 1123 aaKnown RBP11.24□□□□□ -0.61
LINC01539-201ENST00000587904 ALX1Q15699 326 aa11.24□□□□□ -0.61
LINC01539-201ENST00000587904 AMIGO3Q86WK7 504 aa11.24□□□□□ -0.61
LINC01539-201ENST00000587904 CNBD1Q8NA66 436 aa11.24□□□□□ -0.61
LINC01539-201ENST00000587904 RSPH14Q9UHP6 348 aa11.24□□□□□ -0.61
LINC01539-201ENST00000587904 MYO5AQ9Y4I1 1855 aaKnown RBP11.24□□□□□ -0.61
LINC01539-201ENST00000587904 NPHP1O15259 732 aa11.23□□□□□ -0.61
LINC01539-201ENST00000587904 KIF1CO43896 1103 aaKnown RBP11.23□□□□□ -0.61
LINC01539-201ENST00000587904 PRR29P0C7W0 189 aa11.23□□□□□ -0.61
LINC01539-201ENST00000587904 GNAT2P19087 354 aa11.23□□□□□ -0.61
LINC01539-201ENST00000587904 SYT1P21579 422 aa11.23□□□□□ -0.61
LINC01539-201ENST00000587904 GJB2P29033 226 aa11.23□□□□□ -0.61
LINC01539-201ENST00000587904 BCAMP50895 628 aa11.23□□□□□ -0.61
LINC01539-201ENST00000587904 EXOSC10Q01780 885 aaKnown RBP11.23□□□□□ -0.61
LINC01539-201ENST00000587904 NFIXQ14938 502 aa11.23□□□□□ -0.61
LINC01539-201ENST00000587904 Q6ZUG5 572 aa11.23□□□□□ -0.61
LINC01539-201ENST00000587904 CELF1Q92879 486 aaKnown RBP11.23□□□□□ -0.61
LINC01539-201ENST00000587904 GTF3C6Q969F1 213 aa11.23□□□□□ -0.61
LINC01539-201ENST00000587904 AIDAQ96BJ3 306 aa11.23□□□□□ -0.61
LINC01539-201ENST00000587904 RAI14Q9P0K7 980 aa11.23□□□□□ -0.61
LINC01539-201ENST00000587904 PNPLA7Q6ZV29 1317 aa11.23□□□□□ -0.61
LINC01539-201ENST00000587904 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.23□□□□□ -0.61
LINC01539-201ENST00000587904 CLSTN1O94985 981 aa11.23□□□□□ -0.61
LINC01539-201ENST00000587904 FGAP02671 866 aa11.23□□□□□ -0.61
LINC01539-201ENST00000587904 ST3GAL1Q11201 340 aa11.23□□□□□ -0.61
LINC01539-201ENST00000587904 SMIM5Q71RC9 77 aa11.23□□□□□ -0.61
LINC01539-201ENST00000587904 LLPHQ9BRT6 129 aaKnown RBP11.23□□□□□ -0.61
LINC01539-201ENST00000587904 LMBRD1Q9NUN5 540 aa11.23□□□□□ -0.61
LINC01539-201ENST00000587904 FAM53CQ9NYF3 392 aa11.23□□□□□ -0.61
LINC01539-201ENST00000587904 WWC3Q9ULE0 1092 aa11.23□□□□□ -0.61
LINC01539-201ENST00000587904 DENND2AQ9ULE3 1009 aa11.23□□□□□ -0.61
LINC01539-201ENST00000587904 TIAM2Q8IVF5 1701 aa11.22□□□□□ -0.61
LINC01539-201ENST00000587904 ZNF213O14771 459 aa11.22□□□□□ -0.61
LINC01539-201ENST00000587904 RAD51AP2Q09MP3 1159 aa11.22□□□□□ -0.61
LINC01539-201ENST00000587904 MUM1L1Q5H9M0 696 aa11.22□□□□□ -0.61
LINC01539-201ENST00000587904 CT47A1Q5JQC4 288 aaPredicted RBP11.22□□□□□ -0.61
LINC01539-201ENST00000587904 LRSAM1Q6UWE0 723 aa11.22□□□□□ -0.61
LINC01539-201ENST00000587904 TCEANC2Q96MN5 208 aa11.22□□□□□ -0.61
LINC01539-201ENST00000587904 LARP6Q9BRS8 491 aaKnown RBP11.22□□□□□ -0.61
LINC01539-201ENST00000587904 MAST2Q6P0Q8 1798 aa11.22□□□□□ -0.61
LINC01539-201ENST00000587904 RGPD3A6NKT7 1758 aaPredicted RBP11.22□□□□□ -0.61
LINC01539-201ENST00000587904 RGPD4Q7Z3J3 1758 aa11.22□□□□□ -0.61
LINC01539-201ENST00000587904 TAF1P21675 1872 aa11.21□□□□□ -0.61
LINC01539-201ENST00000587904 SNAP23O00161 211 aa11.21□□□□□ -0.61
LINC01539-201ENST00000587904 PFKFB2O60825 505 aa11.21□□□□□ -0.61
LINC01539-201ENST00000587904 TRIM37O94972 964 aa11.21□□□□□ -0.61
LINC01539-201ENST00000587904 MBD3O95983 291 aa11.21□□□□□ -0.61
LINC01539-201ENST00000587904 CYP2C19P33261 490 aa11.21□□□□□ -0.61
LINC01539-201ENST00000587904 RALYLQ86SE5 291 aaKnown RBP11.21□□□□□ -0.61
LINC01539-201ENST00000587904 MAGEB6Q8N7X4 407 aa11.21□□□□□ -0.61
LINC01539-201ENST00000587904 NCOA7Q8NI08 942 aa11.21□□□□□ -0.61
LINC01539-201ENST00000587904 UPF1Q92900 1129 aaKnown RBP eCLIP11.21□□□□□ -0.61
LINC01539-201ENST00000587904 BRF1Q92994 677 aa11.21□□□□□ -0.61
LINC01539-201ENST00000587904 STRBPQ96SI9 672 aaKnown RBP11.21□□□□□ -0.61
LINC01539-201ENST00000587904 DONSONQ9NYP3 566 aa11.21□□□□□ -0.61
LINC01539-201ENST00000587904 MYH13Q9UKX3 1938 aa11.21□□□□□ -0.62
LINC01539-201ENST00000587904 GOLGA6L6A8MZA4 724 aa11.21□□□□□ -0.62
LINC01539-201ENST00000587904 F13A1P00488 732 aa11.21□□□□□ -0.62
LINC01539-201ENST00000587904 GYS1P13807 737 aa11.21□□□□□ -0.62
LINC01539-201ENST00000587904 TM4SF1P30408 202 aa11.21□□□□□ -0.62
LINC01539-201ENST00000587904 EVCP57679 992 aa11.21□□□□□ -0.62
LINC01539-201ENST00000587904 ST5P78524 1137 aa11.21□□□□□ -0.62
LINC01539-201ENST00000587904 GRAPQ13588 217 aa11.21□□□□□ -0.62
LINC01539-201ENST00000587904 COL9A3Q14050 684 aaPredicted RBP11.21□□□□□ -0.62
LINC01539-201ENST00000587904 TTLL5Q6EMB2 1281 aa11.21□□□□□ -0.62
LINC01539-201ENST00000587904 FBXO33Q7Z6M2 555 aa11.21□□□□□ -0.62
LINC01539-201ENST00000587904 VPS37DQ86XT2 251 aa11.21□□□□□ -0.62
LINC01539-201ENST00000587904 NECAB1Q8N987 351 aa11.21□□□□□ -0.62
LINC01539-201ENST00000587904 KIF18AQ8NI77 898 aa11.21□□□□□ -0.62
LINC01539-201ENST00000587904 GRAPLQ8TC17 118 aaPredicted RBP11.21□□□□□ -0.62
LINC01539-201ENST00000587904 DUOX1Q9NRD9 1551 aa11.21□□□□□ -0.62
LINC01539-201ENST00000587904 COL1A1P02452 1464 aaPredicted RBP11.2□□□□□ -0.62
LINC01539-201ENST00000587904 RIOK3O14730 519 aaKnown RBP11.2□□□□□ -0.62
LINC01539-201ENST00000587904 PLSCR1O15162 318 aa11.2□□□□□ -0.62
LINC01539-201ENST00000587904 HNRNPH2P55795 449 aaKnown RBP11.2□□□□□ -0.62
LINC01539-201ENST00000587904 TRDNQ13061 729 aa11.2□□□□□ -0.62
LINC01539-201ENST00000587904 MB21D2Q8IYB1 491 aaPredicted RBP11.2□□□□□ -0.62
LINC01539-201ENST00000587904 TMEM87AQ8NBN3 555 aa11.2□□□□□ -0.62
LINC01539-201ENST00000587904 MNS1Q8NEH6 495 aa11.2□□□□□ -0.62
LINC01539-201ENST00000587904 ZNF274Q96GC6 653 aaPredicted RBP11.2□□□□□ -0.62
LINC01539-201ENST00000587904 NACAP1Q9BZK3 213 aa11.2□□□□□ -0.62
LINC01539-201ENST00000587904 LRP2BPQ9P2M1 347 aa11.2□□□□□ -0.62
LINC01539-201ENST00000587904 MTMR6Q9Y217 621 aa11.2□□□□□ -0.62
LINC01539-201ENST00000587904 MBD4O95243 580 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms