RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 LSG1Q9H089 658 aaKnown RBP17.9■□□□□ 0.46
NFIX-208ENST00000587260 ARMT1Q9H993 441 aa17.9■□□□□ 0.46
NFIX-208ENST00000587260 ANO2Q9NQ90 1003 aa17.9■□□□□ 0.46
NFIX-208ENST00000587260 CNOT7Q9UIV1 285 aaKnown RBP17.9■□□□□ 0.46
NFIX-208ENST00000587260 SERPINA10Q9UK55 444 aa17.9■□□□□ 0.46
NFIX-208ENST00000587260 WDR90Q96KV7 1748 aa17.9■□□□□ 0.46
NFIX-208ENST00000587260 GPAA1O43292 621 aa17.89■□□□□ 0.45
NFIX-208ENST00000587260 HHIPL2Q6UWX4 724 aa17.89■□□□□ 0.45
NFIX-208ENST00000587260 MYOZ2Q9NPC6 264 aa17.89■□□□□ 0.45
NFIX-208ENST00000587260 GPRC5DQ9NZD1 345 aa17.89■□□□□ 0.45
NFIX-208ENST00000587260 SCN4AP35499 1836 aa17.89■□□□□ 0.45
NFIX-208ENST00000587260 CCDC171Q6TFL3 1326 aa17.88■□□□□ 0.45
NFIX-208ENST00000587260 GLTPD2A6NH11 291 aa17.88■□□□□ 0.45
NFIX-208ENST00000587260 EGFRP00533 1210 aa17.88■□□□□ 0.45
NFIX-208ENST00000587260 LMOD1P29536 600 aaPredicted RBP17.88■□□□□ 0.45
NFIX-208ENST00000587260 HDLBPQ00341 1268 aaKnown RBP17.88■□□□□ 0.45
NFIX-208ENST00000587260 RBM26Q5T8P6 1007 aaKnown RBP17.88■□□□□ 0.45
NFIX-208ENST00000587260 ZDHHC15Q96MV8 337 aa17.88■□□□□ 0.45
NFIX-208ENST00000587260 RIOK1Q9BRS2 568 aaKnown RBP17.88■□□□□ 0.45
NFIX-208ENST00000587260 RBM19Q9Y4C8 960 aaKnown RBP17.88■□□□□ 0.45
NFIX-208ENST00000587260 GPR75-ASB3A0A0A6YYF3 556 aa17.88■□□□□ 0.45
NFIX-208ENST00000587260 EPS15P42566 896 aa17.88■□□□□ 0.45
NFIX-208ENST00000587260 ZNF280AP59817 542 aaPredicted RBP17.88■□□□□ 0.45
NFIX-208ENST00000587260 DLGAP5Q15398 846 aa17.88■□□□□ 0.45
NFIX-208ENST00000587260 TBC1D10BQ4KMP7 808 aaPredicted RBP17.88■□□□□ 0.45
NFIX-208ENST00000587260 SAMD7Q7Z3H4 446 aa17.88■□□□□ 0.45
NFIX-208ENST00000587260 SH3RF3Q8TEJ3 882 aaPredicted RBP17.88■□□□□ 0.45
NFIX-208ENST00000587260 MAP4K1Q92918 833 aa17.88■□□□□ 0.45
NFIX-208ENST00000587260 FAM163AQ96GL9 167 aaPredicted RBP17.88■□□□□ 0.45
NFIX-208ENST00000587260 BAZ2AQ9UIF9 1905 aaKnown RBP17.87■□□□□ 0.45
NFIX-208ENST00000587260 H7C1D1 291 aa17.87■□□□□ 0.45
NFIX-208ENST00000587260 BAG3O95817 575 aa17.87■□□□□ 0.45
NFIX-208ENST00000587260 YY1P25490 414 aa17.87■□□□□ 0.45
NFIX-208ENST00000587260 KIF4BQ2VIQ3 1234 aa17.87■□□□□ 0.45
NFIX-208ENST00000587260 APOBEC3HQ6NTF7 200 aaKnown RBP17.87■□□□□ 0.45
NFIX-208ENST00000587260 DDX60LQ5H9U9 1706 aaKnown RBP17.86■□□□□ 0.45
NFIX-208ENST00000587260 SPDYE2BA6NHP3 402 aa17.86■□□□□ 0.45
NFIX-208ENST00000587260 SPDYE6P0CI01 402 aa17.86■□□□□ 0.45
NFIX-208ENST00000587260 PTH1RQ03431 593 aa17.86■□□□□ 0.45
NFIX-208ENST00000587260 VPS53Q5VIR6 699 aa17.86■□□□□ 0.45
NFIX-208ENST00000587260 L3MBTL3Q96JM7 780 aaPredicted RBP17.86■□□□□ 0.45
NFIX-208ENST00000587260 PRMT6Q96LA8 375 aaPredicted RBP17.86■□□□□ 0.45
NFIX-208ENST00000587260 DSCC1Q9BVC3 393 aa17.86■□□□□ 0.45
NFIX-208ENST00000587260 LAMB1P07942 1786 aa17.85■□□□□ 0.45
NFIX-208ENST00000587260 PRKAB2O43741 272 aa17.85■□□□□ 0.45
NFIX-208ENST00000587260 TRPM4Q8TD43 1214 aa17.85■□□□□ 0.45
NFIX-208ENST00000587260 ZNF526Q8TF50 670 aaPredicted RBP17.85■□□□□ 0.45
NFIX-208ENST00000587260 SDR42E1Q8WUS8 393 aa17.85■□□□□ 0.45
NFIX-208ENST00000587260 IL17RAQ96F46 866 aa17.85■□□□□ 0.45
NFIX-208ENST00000587260 STRBPQ96SI9 672 aaKnown RBP17.85■□□□□ 0.45
NFIX-208ENST00000587260 MRIQ9BWK5 157 aa17.85■□□□□ 0.45
NFIX-208ENST00000587260 TDRD3Q9H7E2 651 aaKnown RBP17.85■□□□□ 0.45
NFIX-208ENST00000587260 USP40Q9NVE5 1235 aa17.85■□□□□ 0.45
NFIX-208ENST00000587260 CLRN2A0PK11 232 aa17.84■□□□□ 0.45
NFIX-208ENST00000587260 HSPA4P34932 840 aa17.84■□□□□ 0.45
NFIX-208ENST00000587260 CACNB3P54284 484 aa17.84■□□□□ 0.45
NFIX-208ENST00000587260 RHBDL3P58872 404 aa17.84■□□□□ 0.45
NFIX-208ENST00000587260 NBPF9Q3BBW0 867 aa17.84■□□□□ 0.45
NFIX-208ENST00000587260 CDC42EP5Q6NZY7 148 aa17.84■□□□□ 0.45
NFIX-208ENST00000587260 TEX11Q8IYF3 940 aa17.84■□□□□ 0.45
NFIX-208ENST00000587260 SLC4A4Q9Y6R1 1079 aa17.84■□□□□ 0.45
NFIX-208ENST00000587260 MYH1P12882 1939 aa17.84■□□□□ 0.45
NFIX-208ENST00000587260 WNT10BO00744 389 aa17.83■□□□□ 0.45
NFIX-208ENST00000587260 HSPD1P10809 573 aaKnown RBP17.83■□□□□ 0.45
NFIX-208ENST00000587260 PPP4CP60510 307 aa17.83■□□□□ 0.45
NFIX-208ENST00000587260 NECTIN1Q15223 517 aa17.83■□□□□ 0.45
NFIX-208ENST00000587260 MTMR14Q8NCE2 650 aa17.83■□□□□ 0.45
NFIX-208ENST00000587260 KCNB2Q92953 911 aa17.83■□□□□ 0.45
NFIX-208ENST00000587260 CRNKL1Q9BZJ0 848 aaKnown RBP17.83■□□□□ 0.45
NFIX-208ENST00000587260 HACL1Q9UJ83 578 aa17.83■□□□□ 0.45
NFIX-208ENST00000587260 LAMA4Q16363 1823 aa17.83■□□□□ 0.45
NFIX-208ENST00000587260 ASTN2O75129 1339 aaPredicted RBP17.83■□□□□ 0.44
NFIX-208ENST00000587260 APPP05067 770 aa17.82■□□□□ 0.44
NFIX-208ENST00000587260 PLCG2P16885 1265 aa17.82■□□□□ 0.44
NFIX-208ENST00000587260 MCCP23508 829 aa17.82■□□□□ 0.44
NFIX-208ENST00000587260 USP5P45974 858 aa17.82■□□□□ 0.44
NFIX-208ENST00000587260 MMP14P50281 582 aa17.82■□□□□ 0.44
NFIX-208ENST00000587260 ANAPC15P60006 121 aa17.82■□□□□ 0.44
NFIX-208ENST00000587260 PICALMQ13492 652 aa17.82■□□□□ 0.44
NFIX-208ENST00000587260 ZBED3Q96IU2 234 aaPredicted RBP17.82■□□□□ 0.44
NFIX-208ENST00000587260 ADARB2Q9NS39 739 aaKnown RBP17.82■□□□□ 0.44
NFIX-208ENST00000587260 RPAP1Q9BWH6 1393 aaPredicted RBP17.82■□□□□ 0.44
NFIX-208ENST00000587260 FOXP2O15409 715 aa17.82■□□□□ 0.44
NFIX-208ENST00000587260 MYO1BO43795 1136 aa17.82■□□□□ 0.44
NFIX-208ENST00000587260 GNAT2P19087 354 aa17.82■□□□□ 0.44
NFIX-208ENST00000587260 CERS3Q8IU89 383 aa17.82■□□□□ 0.44
NFIX-208ENST00000587260 MAPKAPK5Q8IW41 473 aa17.82■□□□□ 0.44
NFIX-208ENST00000587260 TGFBRAP1Q8WUH2 860 aa17.82■□□□□ 0.44
NFIX-208ENST00000587260 KIF2CQ99661 725 aa17.82■□□□□ 0.44
NFIX-208ENST00000587260 VEZTQ9HBM0 779 aa17.82■□□□□ 0.44
NFIX-208ENST00000587260 EPB41L4AQ9HCS5 686 aaPredicted RBP17.82■□□□□ 0.44
NFIX-208ENST00000587260 U3KPZ7 1027 aaPredicted RBP17.82■□□□□ 0.44
NFIX-208ENST00000587260 FLT1P17948 1338 aa17.81■□□□□ 0.44
NFIX-208ENST00000587260 IQCA1LA6NCM1 817 aa17.81■□□□□ 0.44
NFIX-208ENST00000587260 EPHX2P34913 555 aa17.81■□□□□ 0.44
NFIX-208ENST00000587260 NFIAQ12857 509 aa17.81■□□□□ 0.44
NFIX-208ENST00000587260 TMOD2Q9NZR1 351 aa17.81■□□□□ 0.44
NFIX-208ENST00000587260 ZNF70Q9UC06 446 aaPredicted RBP17.81■□□□□ 0.44
NFIX-208ENST00000587260 RBM8AQ9Y5S9 174 aaKnown RBP17.81■□□□□ 0.44
NFIX-208ENST00000587260 GSG1L2A8MUP6 293 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms