RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 SPRED2Q7Z698 418 aa7.69□□□□□ -1.18
ZNF540-204ENST00000586792 GLIS3Q8NEA6 775 aa7.69□□□□□ -1.18
ZNF540-204ENST00000586792 FAM84AQ96KN4 292 aa7.69□□□□□ -1.18
ZNF540-204ENST00000586792 RC3H2Q9HBD1 1191 aaKnown RBP7.69□□□□□ -1.18
ZNF540-204ENST00000586792 ACTL7BQ9Y614 415 aa7.69□□□□□ -1.18
ZNF540-204ENST00000586792 NUP160Q12769 1436 aa7.69□□□□□ -1.18
ZNF540-204ENST00000586792 RAB6AP20340 208 aa7.68□□□□□ -1.18
ZNF540-204ENST00000586792 CYP27C1Q4G0S4 372 aa7.68□□□□□ -1.18
ZNF540-204ENST00000586792 CYB5RLQ6IPT4 315 aa7.68□□□□□ -1.18
ZNF540-204ENST00000586792 CAPN12Q6ZSI9 719 aa7.68□□□□□ -1.18
ZNF540-204ENST00000586792 ZKSCAN3Q9BRR0 538 aa7.68□□□□□ -1.18
ZNF540-204ENST00000586792 SEMA6CQ9H3T2 930 aa7.68□□□□□ -1.18
ZNF540-204ENST00000586792 RUSC2Q8N2Y8 1516 aa7.68□□□□□ -1.18
ZNF540-204ENST00000586792 EDN3P14138 238 aa7.67□□□□□ -1.18
ZNF540-204ENST00000586792 FUT4P22083 530 aa7.67□□□□□ -1.18
ZNF540-204ENST00000586792 FAM69CQ0P6D2 419 aa7.67□□□□□ -1.18
ZNF540-204ENST00000586792 ASAP3Q8TDY4 903 aa7.67□□□□□ -1.18
ZNF540-204ENST00000586792 ARAP1Q96P48 1450 aa7.67□□□□□ -1.18
ZNF540-204ENST00000586792 CYP11A1P05108 521 aa7.66□□□□□ -1.18
ZNF540-204ENST00000586792 DYMQ7RTS9 669 aa7.66□□□□□ -1.18
ZNF540-204ENST00000586792 WFDC3Q8IUB2 231 aa7.66□□□□□ -1.18
ZNF540-204ENST00000586792 TOX2Q96NM4 488 aa7.66□□□□□ -1.18
ZNF540-204ENST00000586792 BHLHE41Q9C0J9 482 aaPredicted RBP7.66□□□□□ -1.18
ZNF540-204ENST00000586792 ACSS3Q9H6R3 686 aa7.66□□□□□ -1.18
ZNF540-204ENST00000586792 RAD18Q9NS91 495 aa7.66□□□□□ -1.18
ZNF540-204ENST00000586792 SHROOM2Q13796 1616 aa7.65□□□□□ -1.18
ZNF540-204ENST00000586792 C8orf34Q49A92 452 aa7.65□□□□□ -1.18
ZNF540-204ENST00000586792 PI4K2BQ8TCG2 481 aa7.65□□□□□ -1.18
ZNF540-204ENST00000586792 FAM53CQ9NYF3 392 aa7.65□□□□□ -1.18
ZNF540-204ENST00000586792 KRTAP9-7A8MTY7 169 aa7.64□□□□□ -1.19
ZNF540-204ENST00000586792 RNASE1P07998 156 aaKnown RBP7.64□□□□□ -1.19
ZNF540-204ENST00000586792 ASPAP45381 313 aa7.64□□□□□ -1.19
ZNF540-204ENST00000586792 BNIP3Q12983 259 aa7.64□□□□□ -1.19
ZNF540-204ENST00000586792 SEZ6L2Q6UXD5 910 aa7.64□□□□□ -1.19
ZNF540-204ENST00000586792 ATCAYQ86WG3 371 aa7.64□□□□□ -1.19
ZNF540-204ENST00000586792 NETO1Q8TDF5 533 aa7.64□□□□□ -1.19
ZNF540-204ENST00000586792 EDEM1Q92611 657 aa7.64□□□□□ -1.19
ZNF540-204ENST00000586792 CHRDQ9H2X0 955 aa7.64□□□□□ -1.19
ZNF540-204ENST00000586792 C1GALT1Q9NS00 363 aa7.64□□□□□ -1.19
ZNF540-204ENST00000586792 VAV3Q9UKW4 847 aa7.64□□□□□ -1.19
ZNF540-204ENST00000586792 CARMIL1Q5VZK9 1371 aa7.63□□□□□ -1.19
ZNF540-204ENST00000586792 CD8BP10966 210 aa7.63□□□□□ -1.19
ZNF540-204ENST00000586792 DNM1Q05193 864 aaKnown RBP7.63□□□□□ -1.19
ZNF540-204ENST00000586792 AKAP4Q5JQC9 854 aa7.63□□□□□ -1.19
ZNF540-204ENST00000586792 NRSN2Q9GZP1 204 aa7.63□□□□□ -1.19
ZNF540-204ENST00000586792 GGNBP2Q9H3C7 697 aa7.63□□□□□ -1.19
ZNF540-204ENST00000586792 FAM105AQ9NUU6 356 aa7.63□□□□□ -1.19
ZNF540-204ENST00000586792 ZMIZ1Q9ULJ6 1067 aa7.63□□□□□ -1.19
ZNF540-204ENST00000586792 PRKCQQ04759 706 aa7.62□□□□□ -1.19
ZNF540-204ENST00000586792 MESP2Q0VG99 397 aa7.62□□□□□ -1.19
ZNF540-204ENST00000586792 POU4F3Q15319 338 aa7.62□□□□□ -1.19
ZNF540-204ENST00000586792 ZSCAN18Q8TBC5 510 aaPredicted RBP7.62□□□□□ -1.19
ZNF540-204ENST00000586792 GSX1Q9H4S2 264 aaPredicted RBP7.62□□□□□ -1.19
ZNF540-204ENST00000586792 MBNL3Q9NUK0 354 aaKnown RBP7.62□□□□□ -1.19
ZNF540-204ENST00000586792 KIAA0586Q9BVV6 1533 aa7.62□□□□□ -1.19
ZNF540-204ENST00000586792 RAPGEF2Q9Y4G8 1499 aa7.62□□□□□ -1.19
ZNF540-204ENST00000586792 PRG4Q92954 1404 aaPredicted RBP7.61□□□□□ -1.19
ZNF540-204ENST00000586792 LRRC10BA6NIK2 292 aa7.61□□□□□ -1.19
ZNF540-204ENST00000586792 PHACTR2O75167 634 aa7.61□□□□□ -1.19
ZNF540-204ENST00000586792 PDGFAP04085 211 aa7.61□□□□□ -1.19
ZNF540-204ENST00000586792 ZNF865P0CJ78 1059 aaPredicted RBP7.61□□□□□ -1.19
ZNF540-204ENST00000586792 MAOBP27338 520 aa7.61□□□□□ -1.19
ZNF540-204ENST00000586792 MZF1P28698 734 aaPredicted RBP7.61□□□□□ -1.19
ZNF540-204ENST00000586792 RAP1GAPP47736 663 aa7.61□□□□□ -1.19
ZNF540-204ENST00000586792 LCE5AQ5TCM9 118 aa7.61□□□□□ -1.19
ZNF540-204ENST00000586792 LILRA6Q6PI73 481 aa7.61□□□□□ -1.19
ZNF540-204ENST00000586792 DDX54Q8TDD1 881 aaKnown RBP7.61□□□□□ -1.19
ZNF540-204ENST00000586792 AP4E1Q9UPM8 1137 aa7.61□□□□□ -1.19
ZNF540-204ENST00000586792 DAGLAQ9Y4D2 1042 aa7.61□□□□□ -1.19
ZNF540-204ENST00000586792 IQGAP2Q13576 1575 aa7.61□□□□□ -1.19
ZNF540-204ENST00000586792 ERCC6L2Q5T890 1561 aa7.6□□□□□ -1.19
ZNF540-204ENST00000586792 EREGO14944 169 aa7.6□□□□□ -1.19
ZNF540-204ENST00000586792 NOM1Q5C9Z4 860 aaKnown RBP7.6□□□□□ -1.19
ZNF540-204ENST00000586792 LRRN4CLQ8ND94 238 aa7.6□□□□□ -1.19
ZNF540-204ENST00000586792 STK32AQ8WU08 396 aa7.6□□□□□ -1.19
ZNF540-204ENST00000586792 CTTNBP2Q8WZ74 1663 aa7.6□□□□□ -1.19
ZNF540-204ENST00000586792 SIAH1Q8IUQ4 282 aa7.59□□□□□ -1.19
ZNF540-204ENST00000586792 PLD6Q8N2A8 252 aaKnown RBP7.59□□□□□ -1.19
ZNF540-204ENST00000586792 PPP1R16BQ96T49 567 aa7.59□□□□□ -1.19
ZNF540-204ENST00000586792 CLEC4MQ9H2X3 399 aaPredicted RBP7.59□□□□□ -1.19
ZNF540-204ENST00000586792 A6NHS1 94 aa7.58□□□□□ -1.2
ZNF540-204ENST00000586792 PRRG2O14669 202 aa7.58□□□□□ -1.2
ZNF540-204ENST00000586792 PCDH1Q08174 1060 aa7.58□□□□□ -1.2
ZNF540-204ENST00000586792 SNX29Q8TEQ0 813 aa7.58□□□□□ -1.2
ZNF540-204ENST00000586792 CLP1Q92989 425 aaKnown RBP7.58□□□□□ -1.2
ZNF540-204ENST00000586792 CORO1BQ9BR76 489 aa7.58□□□□□ -1.2
ZNF540-204ENST00000586792 MKNK2Q9HBH9 465 aa7.58□□□□□ -1.2
ZNF540-204ENST00000586792 ADAMTS6Q9UKP5 1117 aa7.58□□□□□ -1.2
ZNF540-204ENST00000586792 EEA1Q15075 1411 aa7.58□□□□□ -1.2
ZNF540-204ENST00000586792 NCANO14594 1321 aa7.57□□□□□ -1.2
ZNF540-204ENST00000586792 SYNGAP1Q96PV0 1343 aa7.57□□□□□ -1.2
ZNF540-204ENST00000586792 DYNC1LI2O43237 492 aaPredicted RBP7.57□□□□□ -1.2
ZNF540-204ENST00000586792 TNFRSF21O75509 655 aa7.57□□□□□ -1.2
ZNF540-204ENST00000586792 EHHADHQ08426 723 aa7.57□□□□□ -1.2
ZNF540-204ENST00000586792 IFI16Q16666 785 aaKnown RBP7.57□□□□□ -1.2
ZNF540-204ENST00000586792 GTF3C3Q9Y5Q9 886 aa7.57□□□□□ -1.2
ZNF540-204ENST00000586792 TSPAN15O95858 294 aa7.56□□□□□ -1.2
ZNF540-204ENST00000586792 CFPP27918 469 aa7.56□□□□□ -1.2
ZNF540-204ENST00000586792 ANGEL2Q5VTE6 544 aaKnown RBP7.56□□□□□ -1.2
ZNF540-204ENST00000586792 ALKBH2Q6NS38 261 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms