RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 SYT1P21579 422 aa17.67■□□□□ 0.42
CDK5RAP3-236ENST00000584991 PTGER2P43116 358 aa17.67■□□□□ 0.42
CDK5RAP3-236ENST00000584991 CCDC183Q5T5S1 534 aa17.67■□□□□ 0.42
CDK5RAP3-236ENST00000584991 RNF20Q5VTR2 975 aa17.67■□□□□ 0.42
CDK5RAP3-236ENST00000584991 CC2D2BQ6DHV5 1058 aa17.67■□□□□ 0.42
CDK5RAP3-236ENST00000584991 DSCC1Q9BVC3 393 aa17.67■□□□□ 0.42
CDK5RAP3-236ENST00000584991 PDRG1Q9NUG6 133 aa17.67■□□□□ 0.42
CDK5RAP3-236ENST00000584991 F13A1P00488 732 aa17.66■□□□□ 0.42
CDK5RAP3-236ENST00000584991 CYP7A1P22680 504 aa17.66■□□□□ 0.42
CDK5RAP3-236ENST00000584991 PRDX5P30044 214 aa17.66■□□□□ 0.42
CDK5RAP3-236ENST00000584991 DOK7Q18PE1 504 aa17.66■□□□□ 0.42
CDK5RAP3-236ENST00000584991 TSGA10IPQ3SY00 556 aa17.66■□□□□ 0.42
CDK5RAP3-236ENST00000584991 NOL8Q76FK4 1167 aaKnown RBP17.66■□□□□ 0.42
CDK5RAP3-236ENST00000584991 AIDAQ96BJ3 306 aa17.66■□□□□ 0.42
CDK5RAP3-236ENST00000584991 COA1Q9GZY4 146 aa17.66■□□□□ 0.42
CDK5RAP3-236ENST00000584991 U3KPZ7 1027 aaPredicted RBP17.66■□□□□ 0.42
CDK5RAP3-236ENST00000584991 SALL1Q9NSC2 1324 aa17.65■□□□□ 0.42
CDK5RAP3-236ENST00000584991 SLC27A2O14975 620 aa17.65■□□□□ 0.42
CDK5RAP3-236ENST00000584991 FOXD4L5Q5VV16 416 aaPredicted RBP17.65■□□□□ 0.42
CDK5RAP3-236ENST00000584991 FOXD4L4Q8WXT5 416 aaPredicted RBP17.65■□□□□ 0.42
CDK5RAP3-236ENST00000584991 RTFDC1Q9BY42 306 aaPredicted RBP17.65■□□□□ 0.42
CDK5RAP3-236ENST00000584991 PIM2Q9P1W9 311 aa17.65■□□□□ 0.42
CDK5RAP3-236ENST00000584991 ZKSCAN5Q9Y2L8 839 aa17.65■□□□□ 0.42
CDK5RAP3-236ENST00000584991 SNED1Q8TER0 1413 aa17.65■□□□□ 0.42
CDK5RAP3-236ENST00000584991 MBD4O95243 580 aa17.65■□□□□ 0.42
CDK5RAP3-236ENST00000584991 SPTY2D1Q68D10 685 aaPredicted RBP17.65■□□□□ 0.42
CDK5RAP3-236ENST00000584991 NAA16Q6N069 864 aaPredicted RBP17.65■□□□□ 0.42
CDK5RAP3-236ENST00000584991 ADGRA1Q86SQ6 560 aa17.65■□□□□ 0.42
CDK5RAP3-236ENST00000584991 ZNF384Q8TF68 577 aa17.65■□□□□ 0.42
CDK5RAP3-236ENST00000584991 NSUN4Q96CB9 384 aaKnown RBP17.65■□□□□ 0.42
CDK5RAP3-236ENST00000584991 G3V3G9 751 aa17.64■□□□□ 0.41
CDK5RAP3-236ENST00000584991 FOXP2O15409 715 aa17.64■□□□□ 0.41
CDK5RAP3-236ENST00000584991 PDCP20941 246 aa17.64■□□□□ 0.41
CDK5RAP3-236ENST00000584991 MECOMQ03112 1051 aa17.64■□□□□ 0.41
CDK5RAP3-236ENST00000584991 DCAF8Q5TAQ9 597 aa17.64■□□□□ 0.41
CDK5RAP3-236ENST00000584991 MIGA1Q8NAN2 632 aa17.64■□□□□ 0.41
CDK5RAP3-236ENST00000584991 STRBPQ96SI9 672 aaKnown RBP17.64■□□□□ 0.41
CDK5RAP3-236ENST00000584991 ARMT1Q9H993 441 aa17.64■□□□□ 0.41
CDK5RAP3-236ENST00000584991 MAST2Q6P0Q8 1798 aa17.64■□□□□ 0.41
CDK5RAP3-236ENST00000584991 LDHBP07195 334 aaKnown RBP17.63■□□□□ 0.41
CDK5RAP3-236ENST00000584991 CCDC93Q567U6 631 aa17.63■□□□□ 0.41
CDK5RAP3-236ENST00000584991 JAKMIP1Q96N16 626 aaKnown RBP17.63■□□□□ 0.41
CDK5RAP3-236ENST00000584991 CD2APQ9Y5K6 639 aa17.63■□□□□ 0.41
CDK5RAP3-236ENST00000584991 BRCA1P38398 1863 aaKnown RBP17.63■□□□□ 0.41
CDK5RAP3-236ENST00000584991 GTF2IP78347 998 aa17.63■□□□□ 0.41
CDK5RAP3-236ENST00000584991 GRIK5Q16478 980 aa17.63■□□□□ 0.41
CDK5RAP3-236ENST00000584991 DBNDD1Q9H9R9 158 aa17.63■□□□□ 0.41
CDK5RAP3-236ENST00000584991 CYP21A2P08686 494 aa17.62■□□□□ 0.41
CDK5RAP3-236ENST00000584991 ADCK5Q3MIX3 580 aa17.62■□□□□ 0.41
CDK5RAP3-236ENST00000584991 GRIPAP1Q4V328 841 aa17.62■□□□□ 0.41
CDK5RAP3-236ENST00000584991 DZIP1Q86YF9 867 aaKnown RBP17.62■□□□□ 0.41
CDK5RAP3-236ENST00000584991 RTKN2Q8IZC4 609 aa17.62■□□□□ 0.41
CDK5RAP3-236ENST00000584991 LCORLQ8N3X6 602 aa17.62■□□□□ 0.41
CDK5RAP3-236ENST00000584991 SUPT20HQ8NEM7 779 aa17.62■□□□□ 0.41
CDK5RAP3-236ENST00000584991 FBXW7Q969H0 707 aa17.62■□□□□ 0.41
CDK5RAP3-236ENST00000584991 TAF6LQ9Y6J9 622 aa17.62■□□□□ 0.41
CDK5RAP3-236ENST00000584991 FAM205AQ6ZU69 1335 aa17.61■□□□□ 0.41
CDK5RAP3-236ENST00000584991 MAGEB6P1A0A0J9YX57 407 aa17.61■□□□□ 0.41
CDK5RAP3-236ENST00000584991 RRP9O43818 475 aaKnown RBP17.61■□□□□ 0.41
CDK5RAP3-236ENST00000584991 DALRD3Q5D0E6 543 aaKnown RBP17.61■□□□□ 0.41
CDK5RAP3-236ENST00000584991 MFSD14BQ5SR56 506 aa17.61■□□□□ 0.41
CDK5RAP3-236ENST00000584991 GADD45BO75293 160 aaPredicted RBP17.61■□□□□ 0.41
CDK5RAP3-236ENST00000584991 FGAP02671 866 aa17.61■□□□□ 0.41
CDK5RAP3-236ENST00000584991 APPP05067 770 aa17.61■□□□□ 0.41
CDK5RAP3-236ENST00000584991 GJB2P29033 226 aa17.61■□□□□ 0.41
CDK5RAP3-236ENST00000584991 KRT32Q14532 448 aa17.61■□□□□ 0.41
CDK5RAP3-236ENST00000584991 AOC3Q16853 763 aa17.61■□□□□ 0.41
CDK5RAP3-236ENST00000584991 TTLL5Q6EMB2 1281 aa17.61■□□□□ 0.41
CDK5RAP3-236ENST00000584991 TBC1D22AQ8WUA7 517 aa17.61■□□□□ 0.41
CDK5RAP3-236ENST00000584991 CHAMP1Q96JM3 812 aa17.61■□□□□ 0.41
CDK5RAP3-236ENST00000584991 DYNLL1P63167 89 aaKnown RBP17.6■□□□□ 0.41
CDK5RAP3-236ENST00000584991 PODNQ7Z5L7 613 aa17.6■□□□□ 0.41
CDK5RAP3-236ENST00000584991 RIOK1Q9BRS2 568 aaKnown RBP17.6■□□□□ 0.41
CDK5RAP3-236ENST00000584991 SPON1Q9HCB6 807 aa17.6■□□□□ 0.41
CDK5RAP3-236ENST00000584991 CTNNA3Q9UI47 895 aa17.6■□□□□ 0.41
CDK5RAP3-236ENST00000584991 MTMR6Q9Y217 621 aa17.6■□□□□ 0.41
CDK5RAP3-236ENST00000584991 MYH2Q9UKX2 1941 aa17.59■□□□□ 0.41
CDK5RAP3-236ENST00000584991 PATL2C9JE40 543 aaKnown RBP17.59■□□□□ 0.41
CDK5RAP3-236ENST00000584991 PRKAB2O43741 272 aa17.59■□□□□ 0.41
CDK5RAP3-236ENST00000584991 KIAA2012Q0VF49 1180 aa17.59■□□□□ 0.41
CDK5RAP3-236ENST00000584991 CNPY2Q9Y2B0 182 aa17.59■□□□□ 0.41
CDK5RAP3-236ENST00000584991 GOLGB1Q14789 3259 aaKnown RBP17.59■□□□□ 0.41
CDK5RAP3-236ENST00000584991 ELP1O95163 1332 aa17.59■□□□□ 0.41
CDK5RAP3-236ENST00000584991 PPIP5K2O43314 1243 aa17.58■□□□□ 0.41
CDK5RAP3-236ENST00000584991 ECE2O60344 883 aa17.58■□□□□ 0.41
CDK5RAP3-236ENST00000584991 IGSF3O75054 1194 aa17.58■□□□□ 0.41
CDK5RAP3-236ENST00000584991 CPA1P15085 419 aa17.58■□□□□ 0.41
CDK5RAP3-236ENST00000584991 SOGA3Q5TF21 947 aa17.58■□□□□ 0.41
CDK5RAP3-236ENST00000584991 TMED8Q6PL24 325 aaPredicted RBP17.58■□□□□ 0.41
CDK5RAP3-236ENST00000584991 PSMD1Q99460 953 aa17.58■□□□□ 0.41
CDK5RAP3-236ENST00000584991 KCNQ5Q9NR82 932 aa17.58■□□□□ 0.41
CDK5RAP3-236ENST00000584991 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.58■□□□□ 0.41
CDK5RAP3-236ENST00000584991 SLC4A4Q9Y6R1 1079 aa17.58■□□□□ 0.41
CDK5RAP3-236ENST00000584991 SCN9AQ15858 1988 aa17.58■□□□□ 0.41
CDK5RAP3-236ENST00000584991 GNAT2P19087 354 aa17.58■□□□□ 0.4
CDK5RAP3-236ENST00000584991 DIXDC1Q155Q3 683 aa17.58■□□□□ 0.4
CDK5RAP3-236ENST00000584991 BLOC1S2Q6QNY1 142 aa17.58■□□□□ 0.4
CDK5RAP3-236ENST00000584991 AATFQ9NY61 560 aaKnown RBP eCLIP17.58■□□□□ 0.4
CDK5RAP3-236ENST00000584991 GSG1L2A8MUP6 293 aa17.57■□□□□ 0.4
CDK5RAP3-236ENST00000584991 HAND2P61296 217 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms