RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 TEX13AQ9BXU3 409 aaPredicted RBP7.3□□□□□ -1.24
CDH8-213ENST00000584966 SEMA6BQ9H3T3 888 aa7.3□□□□□ -1.24
CDH8-213ENST00000584966 SUV39H2Q9H5I1 410 aa7.3□□□□□ -1.24
CDH8-213ENST00000584966 FKBPLQ9UIM3 349 aa7.3□□□□□ -1.24
CDH8-213ENST00000584966 ZBTB1Q9Y2K1 713 aa7.3□□□□□ -1.24
CDH8-213ENST00000584966 GOLGB1Q14789 3259 aaKnown RBP7.3□□□□□ -1.24
CDH8-213ENST00000584966 SOS1Q07889 1333 aaPredicted RBP7.29□□□□□ -1.24
CDH8-213ENST00000584966 SCN7AQ01118 1682 aa7.29□□□□□ -1.24
CDH8-213ENST00000584966 ARFGEF2Q9Y6D5 1785 aa7.29□□□□□ -1.24
CDH8-213ENST00000584966 POM121CA8CG34 1229 aa7.29□□□□□ -1.24
CDH8-213ENST00000584966 ERVH48-1M5A8F1 160 aa7.29□□□□□ -1.24
CDH8-213ENST00000584966 HOXB7P09629 217 aa7.29□□□□□ -1.24
CDH8-213ENST00000584966 EXOSC9Q06265 439 aaKnown RBP7.29□□□□□ -1.24
CDH8-213ENST00000584966 ZMYM1Q5SVZ6 1142 aa7.29□□□□□ -1.24
CDH8-213ENST00000584966 C1orf229Q6ZS94 237 aaPredicted RBP7.29□□□□□ -1.24
CDH8-213ENST00000584966 KRTAP4-12Q9BQ66 201 aa7.29□□□□□ -1.24
CDH8-213ENST00000584966 TRAIPQ9BWF2 469 aa7.29□□□□□ -1.24
CDH8-213ENST00000584966 CCDC87Q9NVE4 849 aa7.29□□□□□ -1.24
CDH8-213ENST00000584966 STK32BQ9NY57 414 aa7.29□□□□□ -1.24
CDH8-213ENST00000584966 DYRK1BQ9Y463 629 aa7.29□□□□□ -1.24
CDH8-213ENST00000584966 ZBED9Q6R2W3 1325 aa7.28□□□□□ -1.24
CDH8-213ENST00000584966 NRXN2Q9P2S2 1712 aa7.28□□□□□ -1.24
CDH8-213ENST00000584966 E9PSI1 815 aa7.28□□□□□ -1.24
CDH8-213ENST00000584966 ELL2O00472 640 aaPredicted RBP7.28□□□□□ -1.24
CDH8-213ENST00000584966 STARD3NLO95772 234 aa7.28□□□□□ -1.24
CDH8-213ENST00000584966 SSFA2P28290 1259 aa7.28□□□□□ -1.24
CDH8-213ENST00000584966 IL6STP40189 918 aaPredicted RBP7.28□□□□□ -1.24
CDH8-213ENST00000584966 PIP4K2AP48426 406 aaPredicted RBP7.28□□□□□ -1.24
CDH8-213ENST00000584966 IRF5Q13568 498 aa7.28□□□□□ -1.24
CDH8-213ENST00000584966 PROSER3Q2NL68 480 aa7.28□□□□□ -1.24
CDH8-213ENST00000584966 NBPF20Q3BBV1 942 aa7.28□□□□□ -1.24
CDH8-213ENST00000584966 OCSTAMPQ9BR26 566 aa7.28□□□□□ -1.24
CDH8-213ENST00000584966 TFCP2L1Q9NZI6 479 aa7.28□□□□□ -1.24
CDH8-213ENST00000584966 KIF13BQ9NQT8 1826 aa7.28□□□□□ -1.24
CDH8-213ENST00000584966 UTRNP46939 3433 aa7.28□□□□□ -1.24
CDH8-213ENST00000584966 GPR37L1O60883 481 aa7.27□□□□□ -1.25
CDH8-213ENST00000584966 ANXA1P04083 346 aa7.27□□□□□ -1.25
CDH8-213ENST00000584966 EIF2S2P20042 333 aaKnown RBP7.27□□□□□ -1.25
CDH8-213ENST00000584966 HMGB2P26583 209 aaKnown RBP7.27□□□□□ -1.25
CDH8-213ENST00000584966 CANXP27824 592 aaKnown RBP7.27□□□□□ -1.25
CDH8-213ENST00000584966 MAP2K3P46734 347 aa7.27□□□□□ -1.25
CDH8-213ENST00000584966 CTDSPL2Q05D32 466 aa7.27□□□□□ -1.25
CDH8-213ENST00000584966 POU4F2Q12837 409 aa7.27□□□□□ -1.25
CDH8-213ENST00000584966 TRAPPC3LQ5T215 181 aa7.27□□□□□ -1.25
CDH8-213ENST00000584966 CD163Q86VB7 1156 aa7.27□□□□□ -1.25
CDH8-213ENST00000584966 ADAM32Q8TC27 787 aa7.27□□□□□ -1.25
CDH8-213ENST00000584966 GLMNQ92990 594 aa7.27□□□□□ -1.25
CDH8-213ENST00000584966 CALR3Q96L12 384 aaKnown RBP7.27□□□□□ -1.25
CDH8-213ENST00000584966 TRIM34Q9BYJ4 488 aa7.27□□□□□ -1.25
CDH8-213ENST00000584966 MYH16Q9H6N6 1097 aa7.27□□□□□ -1.25
CDH8-213ENST00000584966 CYLDQ9NQC7 956 aa7.27□□□□□ -1.25
CDH8-213ENST00000584966 RTCBQ9Y3I0 505 aaKnown RBP7.27□□□□□ -1.25
CDH8-213ENST00000584966 NDUFB9Q9Y6M9 179 aa7.27□□□□□ -1.25
CDH8-213ENST00000584966 ANKRD31Q8N7Z5 1873 aa7.26□□□□□ -1.25
CDH8-213ENST00000584966 COL15A1P39059 1388 aa7.26□□□□□ -1.25
CDH8-213ENST00000584966 MEN1O00255 615 aa7.26□□□□□ -1.25
CDH8-213ENST00000584966 TWISTNBQ3B726 338 aaPredicted RBP7.26□□□□□ -1.25
CDH8-213ENST00000584966 FLAD1Q8NFF5 587 aa7.26□□□□□ -1.25
CDH8-213ENST00000584966 EDARADDQ8WWZ3 215 aa7.26□□□□□ -1.25
CDH8-213ENST00000584966 HMX1Q9NP08 348 aaPredicted RBP7.26□□□□□ -1.25
CDH8-213ENST00000584966 DDX21Q9NR30 783 aaKnown RBP eCLIP7.26□□□□□ -1.25
CDH8-213ENST00000584966 SRP68Q9UHB9 627 aaKnown RBP7.26□□□□□ -1.25
CDH8-213ENST00000584966 NARFQ9UHQ1 456 aa7.26□□□□□ -1.25
CDH8-213ENST00000584966 KIAA1551Q9HCM1 1747 aa7.26□□□□□ -1.25
CDH8-213ENST00000584966 LRP5O75197 1615 aa7.26□□□□□ -1.25
CDH8-213ENST00000584966 USP42Q9H9J4 1324 aaKnown RBP7.26□□□□□ -1.25
CDH8-213ENST00000584966 N4BP2Q86UW6 1770 aaPredicted RBP7.25□□□□□ -1.25
CDH8-213ENST00000584966 CAMTA2O94983 1202 aa7.25□□□□□ -1.25
CDH8-213ENST00000584966 GYS1P13807 737 aa7.25□□□□□ -1.25
CDH8-213ENST00000584966 MYL6BP14649 208 aa7.25□□□□□ -1.25
CDH8-213ENST00000584966 CHRNA4P43681 627 aa7.25□□□□□ -1.25
CDH8-213ENST00000584966 PTK2Q05397 1052 aa7.25□□□□□ -1.25
CDH8-213ENST00000584966 DOC2BQ14184 412 aa7.25□□□□□ -1.25
CDH8-213ENST00000584966 HLFQ16534 295 aa7.25□□□□□ -1.25
CDH8-213ENST00000584966 HDGFL1Q5TGJ6 251 aa7.25□□□□□ -1.25
CDH8-213ENST00000584966 TTLL7Q6ZT98 887 aa7.25□□□□□ -1.25
CDH8-213ENST00000584966 KLRG1Q96E93 195 aa7.25□□□□□ -1.25
CDH8-213ENST00000584966 NUCKS1Q9H1E3 243 aaKnown RBP7.25□□□□□ -1.25
CDH8-213ENST00000584966 PHAXQ9H814 394 aaKnown RBP7.25□□□□□ -1.25
CDH8-213ENST00000584966 CHPF2Q9P2E5 772 aa7.25□□□□□ -1.25
CDH8-213ENST00000584966 BRCA1P38398 1863 aaKnown RBP7.25□□□□□ -1.25
CDH8-213ENST00000584966 LAMB2P55268 1798 aa7.25□□□□□ -1.25
CDH8-213ENST00000584966 TCERG1O14776 1098 aaKnown RBP7.24□□□□□ -1.25
CDH8-213ENST00000584966 ZBTB7AO95365 584 aa7.24□□□□□ -1.25
CDH8-213ENST00000584966 AMPD1P23109 780 aa7.24□□□□□ -1.25
CDH8-213ENST00000584966 TM4SF1P30408 202 aa7.24□□□□□ -1.25
CDH8-213ENST00000584966 RFC4P35249 363 aa7.24□□□□□ -1.25
CDH8-213ENST00000584966 USPL1Q5W0Q7 1092 aa7.24□□□□□ -1.25
CDH8-213ENST00000584966 LINC00114Q6XXX2 140 aa7.24□□□□□ -1.25
CDH8-213ENST00000584966 G2E3Q7L622 706 aa7.24□□□□□ -1.25
CDH8-213ENST00000584966 LRRN4Q8WUT4 740 aa7.24□□□□□ -1.25
CDH8-213ENST00000584966 DBF4Q9UBU7 674 aaPredicted RBP7.24□□□□□ -1.25
CDH8-213ENST00000584966 A0A087WZG4 1122 aa7.23□□□□□ -1.25
CDH8-213ENST00000584966 SCO2A0A1W2PP80 73 aa7.23□□□□□ -1.25
CDH8-213ENST00000584966 ATP5J2-PTCD1G3V325 749 aa7.23□□□□□ -1.25
CDH8-213ENST00000584966 NR6A1Q15406 480 aa7.23□□□□□ -1.25
CDH8-213ENST00000584966 CCDC30Q5VVM6 783 aa7.23□□□□□ -1.25
CDH8-213ENST00000584966 COPS6Q7L5N1 327 aa7.23□□□□□ -1.25
CDH8-213ENST00000584966 DZIP3Q86Y13 1208 aaKnown RBP7.23□□□□□ -1.25
CDH8-213ENST00000584966 RETREG2Q8NC44 543 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms