RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 SEMA3EO15041 775 aa25.34■■□□□ 1.65
TOP3A-219ENST00000584887 GTF2A2P52657 109 aa25.34■■□□□ 1.65
TOP3A-219ENST00000584887 CCDC102BQ68D86 513 aa25.34■■□□□ 1.65
TOP3A-219ENST00000584887 CDC42EP5Q6NZY7 148 aa25.34■■□□□ 1.65
TOP3A-219ENST00000584887 MIGA2Q7L4E1 593 aa25.34■■□□□ 1.65
TOP3A-219ENST00000584887 ZKSCAN4Q969J2 545 aaPredicted RBP25.34■■□□□ 1.65
TOP3A-219ENST00000584887 MS4A4AQ96JQ5 239 aa25.34■■□□□ 1.65
TOP3A-219ENST00000584887 TIMM10P62072 90 aa25.33■■□□□ 1.65
TOP3A-219ENST00000584887 ATF7IPQ6VMQ6 1270 aa25.33■■□□□ 1.65
TOP3A-219ENST00000584887 CD99L2Q8TCZ2 262 aa25.33■■□□□ 1.65
TOP3A-219ENST00000584887 ERO1AQ96HE7 468 aa25.33■■□□□ 1.65
TOP3A-219ENST00000584887 SNCAIPQ9Y6H5 919 aa25.33■■□□□ 1.65
TOP3A-219ENST00000584887 RPAP1Q9BWH6 1393 aaPredicted RBP25.32■■□□□ 1.64
TOP3A-219ENST00000584887 SPDYE5A6NIY4 337 aa25.32■■□□□ 1.64
TOP3A-219ENST00000584887 TFCP2Q12800 502 aa25.32■■□□□ 1.64
TOP3A-219ENST00000584887 TAF1CQ15572 869 aaPredicted RBP25.32■■□□□ 1.64
TOP3A-219ENST00000584887 ZNF341Q9BYN7 854 aa25.32■■□□□ 1.64
TOP3A-219ENST00000584887 USP40Q9NVE5 1235 aa25.32■■□□□ 1.64
TOP3A-219ENST00000584887 PDE4DIPQ5VU43 2346 aa25.32■■□□□ 1.64
TOP3A-219ENST00000584887 AK9Q5TCS8 1911 aa25.31■■□□□ 1.64
TOP3A-219ENST00000584887 OTOP1Q7RTM1 612 aa25.31■■□□□ 1.64
TOP3A-219ENST00000584887 FAM151AQ8WW52 585 aa25.31■■□□□ 1.64
TOP3A-219ENST00000584887 AKAP2Q9Y2D5 859 aa25.31■■□□□ 1.64
TOP3A-219ENST00000584887 SALL1Q9NSC2 1324 aa25.31■■□□□ 1.64
TOP3A-219ENST00000584887 A0A1B0GUL7 405 aa25.3■■□□□ 1.64
TOP3A-219ENST00000584887 GNAI2P04899 355 aa25.3■■□□□ 1.64
TOP3A-219ENST00000584887 HNRNPUQ00839 825 aaKnown RBP eCLIP25.3■■□□□ 1.64
TOP3A-219ENST00000584887 NFIAQ12857 509 aa25.3■■□□□ 1.64
TOP3A-219ENST00000584887 RASGRF1Q13972 1273 aa25.3■■□□□ 1.64
TOP3A-219ENST00000584887 ERO1BQ86YB8 467 aa25.3■■□□□ 1.64
TOP3A-219ENST00000584887 DZIP1Q86YF9 867 aaKnown RBP25.3■■□□□ 1.64
TOP3A-219ENST00000584887 ZGPATQ8N5A5 531 aaKnown RBP25.3■■□□□ 1.64
TOP3A-219ENST00000584887 ABCF2Q9UG63 623 aa25.3■■□□□ 1.64
TOP3A-219ENST00000584887 SP3Q02447 781 aa25.29■■□□□ 1.64
TOP3A-219ENST00000584887 MTX1Q13505 466 aa25.29■■□□□ 1.64
TOP3A-219ENST00000584887 XAGE2Q96GT9 111 aa25.29■■□□□ 1.64
TOP3A-219ENST00000584887 NEUROD6Q96NK8 337 aa25.29■■□□□ 1.64
TOP3A-219ENST00000584887 ZFYVE28Q9HCC9 887 aa25.29■■□□□ 1.64
TOP3A-219ENST00000584887 CETPP11597 493 aa25.28■■□□□ 1.64
TOP3A-219ENST00000584887 INPP5BP32019 993 aa25.28■■□□□ 1.64
TOP3A-219ENST00000584887 MVPQ14764 893 aaKnown RBP25.28■■□□□ 1.64
TOP3A-219ENST00000584887 FAM43AQ8N2R8 423 aa25.28■■□□□ 1.64
TOP3A-219ENST00000584887 SNAPC2Q13487 334 aa25.27■■□□□ 1.64
TOP3A-219ENST00000584887 GORABQ5T7V8 394 aa25.27■■□□□ 1.64
TOP3A-219ENST00000584887 MIER1Q8N108 512 aa25.27■■□□□ 1.64
TOP3A-219ENST00000584887 EFCC1Q9HA90 598 aa25.27■■□□□ 1.64
TOP3A-219ENST00000584887 FAM198AQ9UFP1 575 aa25.27■■□□□ 1.64
TOP3A-219ENST00000584887 IRF6O14896 467 aa25.26■■□□□ 1.63
TOP3A-219ENST00000584887 WDHD1O75717 1129 aaPredicted RBP25.26■■□□□ 1.63
TOP3A-219ENST00000584887 PPIL2Q13356 520 aa25.26■■□□□ 1.63
TOP3A-219ENST00000584887 ZKSCAN2Q63HK3 967 aa25.26■■□□□ 1.63
TOP3A-219ENST00000584887 MYH2Q9UKX2 1941 aa25.25■■□□□ 1.63
TOP3A-219ENST00000584887 PNMA6EA0A0J9YXQ4 647 aa25.25■■□□□ 1.63
TOP3A-219ENST00000584887 G3BP1Q13283 466 aaKnown RBP eCLIP25.25■■□□□ 1.63
TOP3A-219ENST00000584887 SPTY2D1Q68D10 685 aaPredicted RBP25.25■■□□□ 1.63
TOP3A-219ENST00000584887 TMEM57Q8N5G2 664 aa25.25■■□□□ 1.63
TOP3A-219ENST00000584887 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.25■■□□□ 1.63
TOP3A-219ENST00000584887 RGS3P49796 1198 aa25.24■■□□□ 1.63
TOP3A-219ENST00000584887 ZSCAN29Q8IWY8 852 aaPredicted RBP25.24■■□□□ 1.63
TOP3A-219ENST00000584887 ZFPM1Q8IX07 1006 aa25.24■■□□□ 1.63
TOP3A-219ENST00000584887 SLF2Q8IX21 1173 aa25.24■■□□□ 1.63
TOP3A-219ENST00000584887 GAKO14976 1311 aa25.23■■□□□ 1.63
TOP3A-219ENST00000584887 PDS5AQ29RF7 1337 aaKnown RBP25.23■■□□□ 1.63
TOP3A-219ENST00000584887 BTBD19C9JJ37 291 aa25.23■■□□□ 1.63
TOP3A-219ENST00000584887 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.23■■□□□ 1.63
TOP3A-219ENST00000584887 PTPN22Q9Y2R2 807 aa25.23■■□□□ 1.63
TOP3A-219ENST00000584887 BTDP43251 543 aa25.22■■□□□ 1.63
TOP3A-219ENST00000584887 PPATQ06203 517 aa25.22■■□□□ 1.63
TOP3A-219ENST00000584887 ERICH6Q7L0X2 663 aa25.22■■□□□ 1.63
TOP3A-219ENST00000584887 CAP1Q01518 475 aa25.21■■□□□ 1.63
TOP3A-219ENST00000584887 OS9Q13438 667 aaPredicted RBP25.21■■□□□ 1.63
TOP3A-219ENST00000584887 PICALMQ13492 652 aa25.21■■□□□ 1.63
TOP3A-219ENST00000584887 DIEXFQ68CQ4 756 aaKnown RBP25.21■■□□□ 1.63
TOP3A-219ENST00000584887 PI16Q6UXB8 463 aa25.21■■□□□ 1.63
TOP3A-219ENST00000584887 FTSJ3Q8IY81 847 aaKnown RBP25.21■■□□□ 1.63
TOP3A-219ENST00000584887 ZNF112Q9UJU3 913 aa25.21■■□□□ 1.63
TOP3A-219ENST00000584887 ARHGEF6Q15052 776 aa25.2■■□□□ 1.62
TOP3A-219ENST00000584887 HMG20BQ9P0W2 317 aa25.2■■□□□ 1.62
TOP3A-219ENST00000584887 MROH7-TTC4A0A0A0MT08 1334 aa25.19■■□□□ 1.62
TOP3A-219ENST00000584887 ZBTB22O15209 634 aa25.19■■□□□ 1.62
TOP3A-219ENST00000584887 ENTPD3O75355 529 aa25.19■■□□□ 1.62
TOP3A-219ENST00000584887 MECOMQ03112 1051 aa25.19■■□□□ 1.62
TOP3A-219ENST00000584887 SPATA5Q8NB90 893 aa25.19■■□□□ 1.62
TOP3A-219ENST00000584887 IDI2Q9BXS1 227 aa25.19■■□□□ 1.62
TOP3A-219ENST00000584887 C1orf115Q9H7X2 142 aa25.19■■□□□ 1.62
TOP3A-219ENST00000584887 ECM2O94769 699 aaPredicted RBP25.18■■□□□ 1.62
TOP3A-219ENST00000584887 TBC1D9Q6ZT07 1266 aa25.18■■□□□ 1.62
TOP3A-219ENST00000584887 ITPRIPQ8IWB1 547 aa25.18■■□□□ 1.62
TOP3A-219ENST00000584887 ZCCHC17Q9NP64 241 aaKnown RBP25.18■■□□□ 1.62
TOP3A-219ENST00000584887 RAI14Q9P0K7 980 aa25.18■■□□□ 1.62
TOP3A-219ENST00000584887 DOCK2Q92608 1830 aa25.18■■□□□ 1.62
TOP3A-219ENST00000584887 TLR2O60603 784 aa25.17■■□□□ 1.62
TOP3A-219ENST00000584887 KIF22Q14807 665 aa25.17■■□□□ 1.62
TOP3A-219ENST00000584887 NOL9Q5SY16 702 aaKnown RBP25.17■■□□□ 1.62
TOP3A-219ENST00000584887 FAM163AQ96GL9 167 aaPredicted RBP25.17■■□□□ 1.62
TOP3A-219ENST00000584887 DDX4Q9NQI0 724 aaKnown RBP25.17■■□□□ 1.62
TOP3A-219ENST00000584887 KIAA0100Q14667 2235 aaKnown RBP25.17■■□□□ 1.62
TOP3A-219ENST00000584887 RFX7Q2KHR2 1363 aa25.17■■□□□ 1.62
TOP3A-219ENST00000584887 SH3BP5LQ7L8J4 393 aa25.16■■□□□ 1.62
TOP3A-219ENST00000584887 PICK1Q9NRD5 415 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms