RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 SLF2Q8IX21 1173 aa16.61■□□□□ 0.25
UBBP4-202ENST00000584755 CERS5Q8N5B7 392 aa16.61■□□□□ 0.25
UBBP4-202ENST00000584755 DBNDD1Q9H9R9 158 aa16.61■□□□□ 0.25
UBBP4-202ENST00000584755 AATFQ9NY61 560 aaKnown RBP eCLIP16.61■□□□□ 0.25
UBBP4-202ENST00000584755 SCN9AQ15858 1988 aa16.61■□□□□ 0.25
UBBP4-202ENST00000584755 PSME4Q14997 1843 aa16.61■□□□□ 0.25
UBBP4-202ENST00000584755 GPR75-ASB3A0A0A6YYF3 556 aa16.61■□□□□ 0.25
UBBP4-202ENST00000584755 G3V3G9 751 aa16.61■□□□□ 0.25
UBBP4-202ENST00000584755 HAND2P61296 217 aa16.61■□□□□ 0.25
UBBP4-202ENST00000584755 ANKRD1Q15327 319 aa16.61■□□□□ 0.25
UBBP4-202ENST00000584755 AOC3Q16853 763 aa16.61■□□□□ 0.25
UBBP4-202ENST00000584755 FER1L6Q2WGJ9 1857 aa16.61■□□□□ 0.25
UBBP4-202ENST00000584755 DCAF8Q5TAQ9 597 aa16.61■□□□□ 0.25
UBBP4-202ENST00000584755 DHX32Q7L7V1 743 aaKnown RBP16.61■□□□□ 0.25
UBBP4-202ENST00000584755 FBXL16Q8N461 479 aa16.61■□□□□ 0.25
UBBP4-202ENST00000584755 SDR42E1Q8WUS8 393 aa16.61■□□□□ 0.25
UBBP4-202ENST00000584755 AGXT2Q9BYV1 514 aa16.61■□□□□ 0.25
UBBP4-202ENST00000584755 CRNKL1Q9BZJ0 848 aaKnown RBP16.61■□□□□ 0.25
UBBP4-202ENST00000584755 ATP8A2Q9NTI2 1148 aa16.61■□□□□ 0.25
UBBP4-202ENST00000584755 ANAPC4Q9UJX5 808 aa16.61■□□□□ 0.25
UBBP4-202ENST00000584755 LIMCH1Q9UPQ0 1083 aa16.61■□□□□ 0.25
UBBP4-202ENST00000584755 BAG3O95817 575 aa16.6■□□□□ 0.25
UBBP4-202ENST00000584755 TDO2P48775 406 aa16.6■□□□□ 0.25
UBBP4-202ENST00000584755 TBC1D10CQ8IV04 446 aa16.6■□□□□ 0.25
UBBP4-202ENST00000584755 MB21D2Q8IYB1 491 aaPredicted RBP16.6■□□□□ 0.25
UBBP4-202ENST00000584755 PPIP5K2O43314 1243 aa16.59■□□□□ 0.25
UBBP4-202ENST00000584755 TOB2Q14106 344 aaPredicted RBP16.59■□□□□ 0.25
UBBP4-202ENST00000584755 DACT2Q5SW24 774 aa16.59■□□□□ 0.25
UBBP4-202ENST00000584755 INTS4Q96HW7 963 aaKnown RBP16.59■□□□□ 0.25
UBBP4-202ENST00000584755 ZSCAN31Q96LW9 406 aaPredicted RBP16.59■□□□□ 0.25
UBBP4-202ENST00000584755 MKRN1Q9UHC7 482 aaKnown RBP16.59■□□□□ 0.25
UBBP4-202ENST00000584755 WDR19Q8NEZ3 1342 aa16.59■□□□□ 0.25
UBBP4-202ENST00000584755 USP17L3A6NCW0 530 aa16.58■□□□□ 0.24
UBBP4-202ENST00000584755 USP17L4A6NCW7 530 aa16.58■□□□□ 0.24
UBBP4-202ENST00000584755 USP17L1Q7RTZ2 530 aa16.58■□□□□ 0.24
UBBP4-202ENST00000584755 NCOA7Q8NI08 942 aa16.58■□□□□ 0.24
UBBP4-202ENST00000584755 MRIQ9BWK5 157 aa16.58■□□□□ 0.24
UBBP4-202ENST00000584755 SLKQ9H2G2 1235 aaPredicted RBP16.58■□□□□ 0.24
UBBP4-202ENST00000584755 SPON1Q9HCB6 807 aa16.58■□□□□ 0.24
UBBP4-202ENST00000584755 DCP1AQ9NPI6 582 aaPredicted RBP16.58■□□□□ 0.24
UBBP4-202ENST00000584755 KCNQ5Q9NR82 932 aa16.58■□□□□ 0.24
UBBP4-202ENST00000584755 COL4A5P29400 1685 aa16.57■□□□□ 0.24
UBBP4-202ENST00000584755 YDJCA8MPS7 323 aa16.57■□□□□ 0.24
UBBP4-202ENST00000584755 PLCG2P16885 1265 aa16.57■□□□□ 0.24
UBBP4-202ENST00000584755 SBK1Q52WX2 424 aa16.57■□□□□ 0.24
UBBP4-202ENST00000584755 SPRYD3Q8NCJ5 442 aa16.57■□□□□ 0.24
UBBP4-202ENST00000584755 STAG1Q8WVM7 1258 aa16.57■□□□□ 0.24
UBBP4-202ENST00000584755 NOL10Q9BSC4 688 aaKnown RBP16.57■□□□□ 0.24
UBBP4-202ENST00000584755 SH2B1Q9NRF2 756 aaPredicted RBP16.57■□□□□ 0.24
UBBP4-202ENST00000584755 CIZ1Q9ULV3 898 aaPredicted RBP16.57■□□□□ 0.24
UBBP4-202ENST00000584755 LAMB1P07942 1786 aa16.57■□□□□ 0.24
UBBP4-202ENST00000584755 ARFGEF1Q9Y6D6 1849 aa16.57■□□□□ 0.24
UBBP4-202ENST00000584755 CDK5RAP2Q96SN8 1893 aa16.56■□□□□ 0.24
UBBP4-202ENST00000584755 HSP90AA1P07900 732 aaKnown RBP16.56■□□□□ 0.24
UBBP4-202ENST00000584755 FGRP09769 529 aa16.56■□□□□ 0.24
UBBP4-202ENST00000584755 BTDP43251 543 aa16.56■□□□□ 0.24
UBBP4-202ENST00000584755 RHBDL3P58872 404 aa16.56■□□□□ 0.24
UBBP4-202ENST00000584755 PPARAQ07869 468 aa16.56■□□□□ 0.24
UBBP4-202ENST00000584755 AKNAD1Q5T1N1 836 aa16.56■□□□□ 0.24
UBBP4-202ENST00000584755 HHIPL2Q6UWX4 724 aa16.56■□□□□ 0.24
UBBP4-202ENST00000584755 ILDR2Q71H61 639 aa16.56■□□□□ 0.24
UBBP4-202ENST00000584755 SH3RF3Q8TEJ3 882 aaPredicted RBP16.56■□□□□ 0.24
UBBP4-202ENST00000584755 TCEANC2Q96MN5 208 aa16.56■□□□□ 0.24
UBBP4-202ENST00000584755 MXD3Q9BW11 206 aa16.56■□□□□ 0.24
UBBP4-202ENST00000584755 TTF2Q9UNY4 1162 aaKnown RBP16.56■□□□□ 0.24
UBBP4-202ENST00000584755 DAGLAQ9Y4D2 1042 aa16.56■□□□□ 0.24
UBBP4-202ENST00000584755 TACC3Q9Y6A5 838 aa16.56■□□□□ 0.24
UBBP4-202ENST00000584755 BAZ2AQ9UIF9 1905 aaKnown RBP16.56■□□□□ 0.24
UBBP4-202ENST00000584755 DDX60LQ5H9U9 1706 aaKnown RBP16.55■□□□□ 0.24
UBBP4-202ENST00000584755 MCM5P33992 734 aa16.55■□□□□ 0.24
UBBP4-202ENST00000584755 ANTXR2P58335 489 aa16.55■□□□□ 0.24
UBBP4-202ENST00000584755 HDLBPQ00341 1268 aaKnown RBP16.55■□□□□ 0.24
UBBP4-202ENST00000584755 CTR9Q6PD62 1173 aa16.55■□□□□ 0.24
UBBP4-202ENST00000584755 Q6ZUG5 572 aa16.55■□□□□ 0.24
UBBP4-202ENST00000584755 NOL8Q76FK4 1167 aaKnown RBP16.55■□□□□ 0.24
UBBP4-202ENST00000584755 RALYLQ86SE5 291 aaKnown RBP16.55■□□□□ 0.24
UBBP4-202ENST00000584755 FBXW7Q969H0 707 aa16.55■□□□□ 0.24
UBBP4-202ENST00000584755 CNNM2Q9H8M5 875 aa16.55■□□□□ 0.24
UBBP4-202ENST00000584755 CWC22Q9HCG8 908 aaKnown RBP16.55■□□□□ 0.24
UBBP4-202ENST00000584755 ZNF277Q9NRM2 450 aaPredicted RBP16.55■□□□□ 0.24
UBBP4-202ENST00000584755 PPP1R1BQ9UD71 204 aaPredicted RBP16.55■□□□□ 0.24
UBBP4-202ENST00000584755 TPCN1Q9ULQ1 816 aa16.55■□□□□ 0.24
UBBP4-202ENST00000584755 LTBP3Q9NS15 1303 aa16.55■□□□□ 0.24
UBBP4-202ENST00000584755 FOCADQ5VW36 1801 aa16.55■□□□□ 0.24
UBBP4-202ENST00000584755 LARGE1O95461 756 aa16.54■□□□□ 0.24
UBBP4-202ENST00000584755 PCP11498 1178 aaKnown RBP16.54■□□□□ 0.24
UBBP4-202ENST00000584755 IARSP41252 1262 aaKnown RBP16.54■□□□□ 0.24
UBBP4-202ENST00000584755 EVCP57679 992 aa16.54■□□□□ 0.24
UBBP4-202ENST00000584755 CTDSPL2Q05D32 466 aa16.54■□□□□ 0.24
UBBP4-202ENST00000584755 TRDNQ13061 729 aa16.54■□□□□ 0.24
UBBP4-202ENST00000584755 ME3Q16798 604 aa16.54■□□□□ 0.24
UBBP4-202ENST00000584755 LARGE2Q8N3Y3 721 aa16.54■□□□□ 0.24
UBBP4-202ENST00000584755 RNF41Q9H4P4 317 aaPredicted RBP16.54■□□□□ 0.24
UBBP4-202ENST00000584755 CHMP5Q9NZZ3 219 aa16.54■□□□□ 0.24
UBBP4-202ENST00000584755 ARPP21Q9UBL0 812 aaPredicted RBP16.54■□□□□ 0.24
UBBP4-202ENST00000584755 NEDD4P46934 1319 aa16.54■□□□□ 0.24
UBBP4-202ENST00000584755 NAV1Q8NEY1 1877 aa16.54■□□□□ 0.24
UBBP4-202ENST00000584755 USP17L12C9JPN9 530 aa16.54■□□□□ 0.24
UBBP4-202ENST00000584755 USP17L21D6R901 530 aa16.54■□□□□ 0.24
UBBP4-202ENST00000584755 NFKBIEO00221 500 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms