RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 PRR5LQ6MZQ0 368 aa12.01□□□□□ -0.49
RFFL-212ENST00000584655 USP17L1Q7RTZ2 530 aa12.01□□□□□ -0.49
RFFL-212ENST00000584655 ZSCAN31Q96LW9 406 aaPredicted RBP12.01□□□□□ -0.49
RFFL-212ENST00000584655 CLIC6Q96NY7 704 aa12.01□□□□□ -0.49
RFFL-212ENST00000584655 VPS54Q9P1Q0 977 aa12.01□□□□□ -0.49
RFFL-212ENST00000584655 CDC25AP30304 524 aa12.01□□□□□ -0.49
RFFL-212ENST00000584655 IKQ13123 557 aaPredicted RBP12.01□□□□□ -0.49
RFFL-212ENST00000584655 ANKRD1Q15327 319 aa12.01□□□□□ -0.49
RFFL-212ENST00000584655 TNS2Q63HR2 1409 aa12.01□□□□□ -0.49
RFFL-212ENST00000584655 LUZP1Q86V48 1076 aa12.01□□□□□ -0.49
RFFL-212ENST00000584655 RASGRP4Q8TDF6 673 aa12.01□□□□□ -0.49
RFFL-212ENST00000584655 GTF3C6Q969F1 213 aa12.01□□□□□ -0.49
RFFL-212ENST00000584655 TNMDQ9H2S6 317 aa12.01□□□□□ -0.49
RFFL-212ENST00000584655 ROBO1Q9Y6N7 1651 aa12.01□□□□□ -0.49
RFFL-212ENST00000584655 NR1I2O75469 434 aa12.01□□□□□ -0.49
RFFL-212ENST00000584655 ZYXQ15942 572 aaKnown RBP12.01□□□□□ -0.49
RFFL-212ENST00000584655 SKOR2Q2VWA4 1001 aaPredicted RBP12.01□□□□□ -0.49
RFFL-212ENST00000584655 ZSCAN25Q6NSZ9 544 aa12.01□□□□□ -0.49
RFFL-212ENST00000584655 NOL10Q9BSC4 688 aaKnown RBP12.01□□□□□ -0.49
RFFL-212ENST00000584655 SH2B1Q9NRF2 756 aaPredicted RBP12.01□□□□□ -0.49
RFFL-212ENST00000584655 ERCC3P19447 782 aa12□□□□□ -0.49
RFFL-212ENST00000584655 ANTXR2P58335 489 aa12□□□□□ -0.49
RFFL-212ENST00000584655 NR5A1Q13285 461 aa12□□□□□ -0.49
RFFL-212ENST00000584655 WTAPQ15007 396 aa12□□□□□ -0.49
RFFL-212ENST00000584655 EZH2Q15910 746 aaKnown RBP12□□□□□ -0.49
RFFL-212ENST00000584655 RRAGDQ9NQL2 400 aaPredicted RBP12□□□□□ -0.49
RFFL-212ENST00000584655 V9GY48 417 aaPredicted RBP12□□□□□ -0.49
RFFL-212ENST00000584655 SPATA31A6Q5VVP1 1343 aa12□□□□□ -0.49
RFFL-212ENST00000584655 PSDA5PKW4 1024 aaPredicted RBP12□□□□□ -0.49
RFFL-212ENST00000584655 CIAO1O76071 339 aa12□□□□□ -0.49
RFFL-212ENST00000584655 IARSP41252 1262 aaKnown RBP12□□□□□ -0.49
RFFL-212ENST00000584655 MRE11P49959 708 aa12□□□□□ -0.49
RFFL-212ENST00000584655 TRIM28Q13263 835 aaKnown RBP12□□□□□ -0.49
RFFL-212ENST00000584655 CUL4AQ13619 759 aa12□□□□□ -0.49
RFFL-212ENST00000584655 ZFP91Q96JP5 570 aaPredicted RBP12□□□□□ -0.49
RFFL-212ENST00000584655 MROH5Q6ZUA9 1318 aa12□□□□□ -0.49
RFFL-212ENST00000584655 LDHBP07195 334 aaKnown RBP12□□□□□ -0.49
RFFL-212ENST00000584655 DDIT3P35638 169 aa12□□□□□ -0.49
RFFL-212ENST00000584655 ST5P78524 1137 aa12□□□□□ -0.49
RFFL-212ENST00000584655 GPSM2P81274 684 aa12□□□□□ -0.49
RFFL-212ENST00000584655 ATP6V1DQ9Y5K8 247 aa12□□□□□ -0.49
RFFL-212ENST00000584655 FAM205CA6NFA0 338 aa11.99□□□□□ -0.49
RFFL-212ENST00000584655 FOXP2O15409 715 aa11.99□□□□□ -0.49
RFFL-212ENST00000584655 ZNF827Q17R98 1081 aa11.99□□□□□ -0.49
RFFL-212ENST00000584655 FSIP1Q8NA03 581 aa11.99□□□□□ -0.49
RFFL-212ENST00000584655 NSUN7Q8NE18 718 aaKnown RBP11.99□□□□□ -0.49
RFFL-212ENST00000584655 ZC3H12CQ9C0D7 883 aaKnown RBP11.99□□□□□ -0.49
RFFL-212ENST00000584655 DNAJC25Q9H1X3 360 aa11.99□□□□□ -0.49
RFFL-212ENST00000584655 TSPY26PQ9H489 355 aa11.99□□□□□ -0.49
RFFL-212ENST00000584655 ZNF142P52746 1687 aaPredicted RBP11.99□□□□□ -0.49
RFFL-212ENST00000584655 GSG1L2A8MUP6 293 aa11.99□□□□□ -0.49
RFFL-212ENST00000584655 CTDNEP1O95476 244 aa11.99□□□□□ -0.49
RFFL-212ENST00000584655 TTF1Q15361 905 aaPredicted RBP11.99□□□□□ -0.49
RFFL-212ENST00000584655 GPKOWQ92917 476 aaPredicted RBP eCLIP11.99□□□□□ -0.49
RFFL-212ENST00000584655 TTC12Q9H892 705 aaPredicted RBP11.99□□□□□ -0.49
RFFL-212ENST00000584655 THRAP3Q9Y2W1 955 aaKnown RBP11.99□□□□□ -0.49
RFFL-212ENST00000584655 CLIC4Q9Y696 253 aa11.99□□□□□ -0.49
RFFL-212ENST00000584655 RPAP1Q9BWH6 1393 aaPredicted RBP11.98□□□□□ -0.49
RFFL-212ENST00000584655 BTBD18B2RXH4 712 aa11.98□□□□□ -0.49
RFFL-212ENST00000584655 VEGFAP15692 232 aaPredicted RBP11.98□□□□□ -0.49
RFFL-212ENST00000584655 SNAP25P60880 206 aa11.98□□□□□ -0.49
RFFL-212ENST00000584655 CPLX2Q6PUV4 134 aaKnown RBP11.98□□□□□ -0.49
RFFL-212ENST00000584655 CCAR1Q8IX12 1150 aaKnown RBP11.98□□□□□ -0.49
RFFL-212ENST00000584655 SH3RF3Q8TEJ3 882 aaPredicted RBP11.98□□□□□ -0.49
RFFL-212ENST00000584655 PRKG1Q13976 671 aa11.98□□□□□ -0.49
RFFL-212ENST00000584655 TACC3Q9Y6A5 838 aa11.98□□□□□ -0.49
RFFL-212ENST00000584655 TRPM3Q9HCF6 1732 aaPredicted RBP11.98□□□□□ -0.49
RFFL-212ENST00000584655 GYS1P13807 737 aa11.98□□□□□ -0.49
RFFL-212ENST00000584655 PDCP20941 246 aa11.98□□□□□ -0.49
RFFL-212ENST00000584655 NOM1Q5C9Z4 860 aaKnown RBP11.98□□□□□ -0.49
RFFL-212ENST00000584655 COL23A1Q86Y22 540 aaPredicted RBP11.98□□□□□ -0.49
RFFL-212ENST00000584655 UBA5Q9GZZ9 404 aa11.98□□□□□ -0.49
RFFL-212ENST00000584655 MED23Q9ULK4 1368 aa11.98□□□□□ -0.49
RFFL-212ENST00000584655 C21orf2O43822 256 aa11.97□□□□□ -0.49
RFFL-212ENST00000584655 CASP1P29466 404 aa11.97□□□□□ -0.49
RFFL-212ENST00000584655 PPARAQ07869 468 aa11.97□□□□□ -0.49
RFFL-212ENST00000584655 DDR1Q08345 913 aa11.97□□□□□ -0.49
RFFL-212ENST00000584655 SART3Q15020 963 aaKnown RBP11.97□□□□□ -0.49
RFFL-212ENST00000584655 IFIT1BQ5T764 474 aaKnown RBP11.97□□□□□ -0.49
RFFL-212ENST00000584655 KLHL10Q6JEL2 608 aa11.97□□□□□ -0.49
RFFL-212ENST00000584655 FILIP1Q7Z7B0 1213 aa11.97□□□□□ -0.49
RFFL-212ENST00000584655 PROM2Q8N271 834 aa11.97□□□□□ -0.49
RFFL-212ENST00000584655 VGLL2Q8N8G2 317 aa11.97□□□□□ -0.49
RFFL-212ENST00000584655 NUP62CLQ9H1M0 184 aa11.97□□□□□ -0.49
RFFL-212ENST00000584655 ANGEL1Q9UNK9 670 aaKnown RBP11.97□□□□□ -0.49
RFFL-212ENST00000584655 PES1O00541 588 aaKnown RBP11.97□□□□□ -0.49
RFFL-212ENST00000584655 RAD17O75943 681 aa11.97□□□□□ -0.49
RFFL-212ENST00000584655 CLRN2A0PK11 232 aa11.97□□□□□ -0.49
RFFL-212ENST00000584655 PLEKHA8P1O95397 391 aa11.97□□□□□ -0.49
RFFL-212ENST00000584655 ZFYP08048 801 aaPredicted RBP11.97□□□□□ -0.49
RFFL-212ENST00000584655 TAL1P17542 331 aaPredicted RBP11.97□□□□□ -0.49
RFFL-212ENST00000584655 TFAP4Q01664 338 aa11.97□□□□□ -0.49
RFFL-212ENST00000584655 CCDC73Q6ZRK6 1079 aa11.97□□□□□ -0.49
RFFL-212ENST00000584655 BARGINQ6ZT62 677 aa11.97□□□□□ -0.49
RFFL-212ENST00000584655 PGBD1Q96JS3 809 aa11.97□□□□□ -0.49
RFFL-212ENST00000584655 TNKSO95271 1327 aa11.97□□□□□ -0.49
RFFL-212ENST00000584655 C5P01031 1676 aa11.97□□□□□ -0.49
RFFL-212ENST00000584655 FAM208AQ9UK61 1670 aaKnown RBP11.96□□□□□ -0.49
RFFL-212ENST00000584655 GLIPR1L2Q4G1C9 344 aa11.96□□□□□ -0.49
RFFL-212ENST00000584655 CCDC84Q86UT8 332 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms