RNA–Protein interactions for RNA: ENST00000584336.1

CDK12-208, Transcript of cyclin dependent kinase 12, humanhuman

Gene CDK12, Length 1,963 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-208ENST00000584336 ALX1Q15699 326 aa12.34□□□□□ -0.43
CDK12-208ENST00000584336 MPNDQ8N594 471 aa12.34□□□□□ -0.43
CDK12-208ENST00000584336 NCOA5Q9HCD5 579 aaKnown RBP12.34□□□□□ -0.43
CDK12-208ENST00000584336 BRPF3Q9ULD4 1205 aa12.34□□□□□ -0.43
CDK12-208ENST00000584336 SMC3Q9UQE7 1217 aa12.34□□□□□ -0.43
CDK12-208ENST00000584336 MINDY4BA8MYZ0 360 aa12.33□□□□□ -0.44
CDK12-208ENST00000584336 CYP2D6P10635 497 aa12.33□□□□□ -0.44
CDK12-208ENST00000584336 IL1R1P14778 569 aa12.33□□□□□ -0.44
CDK12-208ENST00000584336 SH2B1Q9NRF2 756 aaPredicted RBP12.33□□□□□ -0.44
CDK12-208ENST00000584336 NAP1L2Q9ULW6 460 aaPredicted RBP12.33□□□□□ -0.44
CDK12-208ENST00000584336 SLX4Q8IY92 1834 aa12.33□□□□□ -0.44
CDK12-208ENST00000584336 PDS5AQ29RF7 1337 aaKnown RBP12.32□□□□□ -0.44
CDK12-208ENST00000584336 CTDNEP1O95476 244 aa12.32□□□□□ -0.44
CDK12-208ENST00000584336 NUCB2P80303 420 aa12.32□□□□□ -0.44
CDK12-208ENST00000584336 FGD1P98174 961 aa12.32□□□□□ -0.44
CDK12-208ENST00000584336 NCOA7Q8NI08 942 aa12.32□□□□□ -0.44
CDK12-208ENST00000584336 FBXW7Q969H0 707 aa12.32□□□□□ -0.44
CDK12-208ENST00000584336 ZKSCAN3Q9BRR0 538 aa12.32□□□□□ -0.44
CDK12-208ENST00000584336 AGXT2Q9BYV1 514 aa12.32□□□□□ -0.44
CDK12-208ENST00000584336 PPP1R1BQ9UD71 204 aaPredicted RBP12.32□□□□□ -0.44
CDK12-208ENST00000584336 CHD4Q14839 1912 aa12.32□□□□□ -0.44
CDK12-208ENST00000584336 H0YIN7 160 aa12.32□□□□□ -0.44
CDK12-208ENST00000584336 LDHBP07195 334 aaKnown RBP12.32□□□□□ -0.44
CDK12-208ENST00000584336 SYT1P21579 422 aa12.32□□□□□ -0.44
CDK12-208ENST00000584336 POLD1P28340 1107 aa12.32□□□□□ -0.44
CDK12-208ENST00000584336 ALDH1B1P30837 517 aa12.32□□□□□ -0.44
CDK12-208ENST00000584336 FOSBP53539 338 aa12.32□□□□□ -0.44
CDK12-208ENST00000584336 GTF2IP78347 998 aa12.32□□□□□ -0.44
CDK12-208ENST00000584336 ANKRD1Q15327 319 aa12.32□□□□□ -0.44
CDK12-208ENST00000584336 RRP12Q5JTH9 1297 aaKnown RBP12.32□□□□□ -0.44
CDK12-208ENST00000584336 DPP8Q6V1X1 898 aaPredicted RBP12.32□□□□□ -0.44
CDK12-208ENST00000584336 DZIP1Q86YF9 867 aaKnown RBP12.32□□□□□ -0.44
CDK12-208ENST00000584336 DDX11Q96FC9 970 aa12.32□□□□□ -0.44
CDK12-208ENST00000584336 F8W031 263 aaPredicted RBP12.31□□□□□ -0.44
CDK12-208ENST00000584336 HMGB1P09429 215 aaKnown RBP12.31□□□□□ -0.44
CDK12-208ENST00000584336 PDIA3P30101 505 aaKnown RBP12.31□□□□□ -0.44
CDK12-208ENST00000584336 PPARAQ07869 468 aa12.31□□□□□ -0.44
CDK12-208ENST00000584336 MCTP1Q6DN14 999 aa12.31□□□□□ -0.44
CDK12-208ENST00000584336 CTR9Q6PD62 1173 aa12.31□□□□□ -0.44
CDK12-208ENST00000584336 SH3RF3Q8TEJ3 882 aaPredicted RBP12.31□□□□□ -0.44
CDK12-208ENST00000584336 GTF3C6Q969F1 213 aa12.31□□□□□ -0.44
CDK12-208ENST00000584336 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.31□□□□□ -0.44
CDK12-208ENST00000584336 SALL1Q9NSC2 1324 aa12.31□□□□□ -0.44
CDK12-208ENST00000584336 KDM4AO75164 1064 aa12.3□□□□□ -0.44
CDK12-208ENST00000584336 RXRAP19793 462 aa12.3□□□□□ -0.44
CDK12-208ENST00000584336 RALYLQ86SE5 291 aaKnown RBP12.3□□□□□ -0.44
CDK12-208ENST00000584336 CERS5Q8N5B7 392 aa12.3□□□□□ -0.44
CDK12-208ENST00000584336 WDR66Q8TBY9 1149 aa12.3□□□□□ -0.44
CDK12-208ENST00000584336 DBNDD1Q9H9R9 158 aa12.3□□□□□ -0.44
CDK12-208ENST00000584336 ZSWIM5Q9P217 1185 aa12.3□□□□□ -0.44
CDK12-208ENST00000584336 BAZ2AQ9UIF9 1905 aaKnown RBP12.3□□□□□ -0.44
CDK12-208ENST00000584336 PFKFB2O60825 505 aa12.3□□□□□ -0.44
CDK12-208ENST00000584336 PRDM1O75626 825 aa12.3□□□□□ -0.44
CDK12-208ENST00000584336 GNAT2P19087 354 aa12.3□□□□□ -0.44
CDK12-208ENST00000584336 MCM5P33992 734 aa12.3□□□□□ -0.44
CDK12-208ENST00000584336 AKNAD1Q5T1N1 836 aa12.3□□□□□ -0.44
CDK12-208ENST00000584336 STYK1Q6J9G0 422 aa12.3□□□□□ -0.44
CDK12-208ENST00000584336 MYL10Q9BUA6 226 aa12.3□□□□□ -0.44
CDK12-208ENST00000584336 TOMM22Q9NS69 142 aa12.3□□□□□ -0.44
CDK12-208ENST00000584336 HPS5Q9UPZ3 1129 aa12.3□□□□□ -0.44
CDK12-208ENST00000584336 KLF18A0A0U1RQI7 1052 aa12.29□□□□□ -0.44
CDK12-208ENST00000584336 USP17L12C9JPN9 530 aa12.29□□□□□ -0.44
CDK12-208ENST00000584336 USP17L21D6R901 530 aa12.29□□□□□ -0.44
CDK12-208ENST00000584336 USP17L8P0C7I0 530 aa12.29□□□□□ -0.44
CDK12-208ENST00000584336 MFSD14BQ5SR56 506 aa12.29□□□□□ -0.44
CDK12-208ENST00000584336 C7orf43Q8WVR3 580 aa12.29□□□□□ -0.44
CDK12-208ENST00000584336 GDPD2Q9HCC8 539 aa12.29□□□□□ -0.44
CDK12-208ENST00000584336 DCP1AQ9NPI6 582 aaPredicted RBP12.29□□□□□ -0.44
CDK12-208ENST00000584336 MTMR6Q9Y217 621 aa12.29□□□□□ -0.44
CDK12-208ENST00000584336 ZMYM6O95789 1325 aa12.29□□□□□ -0.44
CDK12-208ENST00000584336 SH2B2O14492 632 aaPredicted RBP12.29□□□□□ -0.44
CDK12-208ENST00000584336 STX6O43752 255 aa12.29□□□□□ -0.44
CDK12-208ENST00000584336 C21orf2O43822 256 aa12.29□□□□□ -0.44
CDK12-208ENST00000584336 KCNA3P22001 575 aa12.29□□□□□ -0.44
CDK12-208ENST00000584336 CLEC17AQ6ZS10 378 aa12.29□□□□□ -0.44
CDK12-208ENST00000584336 TMC4Q7Z404 712 aa12.29□□□□□ -0.44
CDK12-208ENST00000584336 CCDC144CPQ8IYA2 1237 aa12.29□□□□□ -0.44
CDK12-208ENST00000584336 NSUN7Q8NE18 718 aaKnown RBP12.29□□□□□ -0.44
CDK12-208ENST00000584336 IL27Q8NEV9 243 aa12.29□□□□□ -0.44
CDK12-208ENST00000584336 IGDCC4Q8TDY8 1250 aa12.29□□□□□ -0.44
CDK12-208ENST00000584336 STAG1Q8WVM7 1258 aa12.29□□□□□ -0.44
CDK12-208ENST00000584336 RTFDC1Q9BY42 306 aaPredicted RBP12.29□□□□□ -0.44
CDK12-208ENST00000584336 NACAP1Q9BZK3 213 aa12.29□□□□□ -0.44
CDK12-208ENST00000584336 ZC3H12CQ9C0D7 883 aaKnown RBP12.29□□□□□ -0.44
CDK12-208ENST00000584336 PCDHAC2Q9Y5I4 1007 aa12.29□□□□□ -0.44
CDK12-208ENST00000584336 MAST2Q6P0Q8 1798 aa12.28□□□□□ -0.44
CDK12-208ENST00000584336 DPEP1P16444 411 aa12.28□□□□□ -0.44
CDK12-208ENST00000584336 SPTY2D1Q68D10 685 aaPredicted RBP12.28□□□□□ -0.44
CDK12-208ENST00000584336 FAM173BQ6P4H8 233 aa12.28□□□□□ -0.44
CDK12-208ENST00000584336 MFSD6Q6ZSS7 791 aa12.28□□□□□ -0.44
CDK12-208ENST00000584336 CDC37L1Q7L3B6 337 aa12.28□□□□□ -0.44
CDK12-208ENST00000584336 GBP4Q96PP9 640 aa12.28□□□□□ -0.44
CDK12-208ENST00000584336 SYT17Q9BSW7 474 aa12.28□□□□□ -0.44
CDK12-208ENST00000584336 FHDC1Q9C0D6 1143 aaPredicted RBP12.28□□□□□ -0.44
CDK12-208ENST00000584336 GZF1Q9H116 711 aaPredicted RBP12.28□□□□□ -0.44
CDK12-208ENST00000584336 TIAM2Q8IVF5 1701 aa12.28□□□□□ -0.44
CDK12-208ENST00000584336 CCDC88AQ3V6T2 1871 aa12.27□□□□□ -0.44
CDK12-208ENST00000584336 VPS37CA5D8V6 355 aaPredicted RBP12.27□□□□□ -0.44
CDK12-208ENST00000584336 ZBTB22O15209 634 aa12.27□□□□□ -0.44
CDK12-208ENST00000584336 TRAK2O60296 914 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms