RNA–Protein interactions for RNA: ENST00000583908.1

NARF-222, Transcript of nuclear prelamin A recognition factor, human

TSL 3

Gene NARF, Length 430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NARF-222	ENST00000583908	ATP5J	P18859	108 aa		12.03	□□□□□ -0.48
NARF-222	ENST00000583908	BTD	P43251	543 aa		12.03	□□□□□ -0.48
NARF-222	ENST00000583908	ZAP70	P43403	619 aa		12.03	□□□□□ -0.48
NARF-222	ENST00000583908	RASA3	Q14644	834 aa		12.03	□□□□□ -0.48
NARF-222	ENST00000583908	GRIK5	Q16478	980 aa		12.03	□□□□□ -0.48
NARF-222	ENST00000583908	DCAF15	Q66K64	600 aa		12.03	□□□□□ -0.48
NARF-222	ENST00000583908	ZSCAN25	Q6NSZ9	544 aa		12.03	□□□□□ -0.48
NARF-222	ENST00000583908	PI16	Q6UXB8	463 aa		12.03	□□□□□ -0.48
NARF-222	ENST00000583908	SAPCD2	Q86UD0	394 aa		12.03	□□□□□ -0.48
NARF-222	ENST00000583908	EXOC6	Q8TAG9	804 aa		12.03	□□□□□ -0.48
NARF-222	ENST00000583908	NSUN4	Q96CB9	384 aa	Known RBP	12.03	□□□□□ -0.48
NARF-222	ENST00000583908	DNAJC2	Q99543	621 aa	Known RBP	12.03	□□□□□ -0.48
NARF-222	ENST00000583908	ECHDC1	Q9NTX5	307 aa		12.03	□□□□□ -0.48
NARF-222	ENST00000583908	USP40	Q9NVE5	1235 aa		12.03	□□□□□ -0.48
NARF-222	ENST00000583908	MKRN1	Q9UHC7	482 aa	Known RBP	12.03	□□□□□ -0.48
NARF-222	ENST00000583908	UNCX	A6NJT0	531 aa		12.02	□□□□□ -0.49
NARF-222	ENST00000583908	CYP2E1	P05181	493 aa	Predicted RBP	12.02	□□□□□ -0.49
NARF-222	ENST00000583908	IREB2	P48200	963 aa	Known RBP	12.02	□□□□□ -0.49
NARF-222	ENST00000583908	HTRA3	P83110	453 aa		12.02	□□□□□ -0.49
NARF-222	ENST00000583908	CST9	Q5W186	159 aa		12.02	□□□□□ -0.49
NARF-222	ENST00000583908	APOBEC3H	Q6NTF7	200 aa	Known RBP	12.02	□□□□□ -0.49
NARF-222	ENST00000583908	CCDC102A	Q96A19	550 aa		12.02	□□□□□ -0.49
NARF-222	ENST00000583908	TTC41P	Q6P2S7	1318 aa		12.02	□□□□□ -0.49
NARF-222	ENST00000583908	GPR75-ASB3	A0A0A6YYF3	556 aa		12.01	□□□□□ -0.49
NARF-222	ENST00000583908	NPM3	O75607	178 aa	Known RBP	12.01	□□□□□ -0.49
NARF-222	ENST00000583908	ANKRD45	Q5TZF3	282 aa		12.01	□□□□□ -0.49
NARF-222	ENST00000583908	RGMB	Q6NW40	437 aa		12.01	□□□□□ -0.49
NARF-222	ENST00000583908	CDC42EP5	Q6NZY7	148 aa		12.01	□□□□□ -0.49
NARF-222	ENST00000583908	TBC1D9	Q6ZT07	1266 aa		12.01	□□□□□ -0.49
NARF-222	ENST00000583908	FAM151A	Q8WW52	585 aa		12.01	□□□□□ -0.49
NARF-222	ENST00000583908	PAG1	Q9NWQ8	432 aa		12.01	□□□□□ -0.49
NARF-222	ENST00000583908	PCDHAC2	Q9Y5I4	1007 aa		12.01	□□□□□ -0.49
NARF-222	ENST00000583908	GOLIM4	O00461	696 aa		12	□□□□□ -0.49
NARF-222	ENST00000583908	SMARCA5	O60264	1052 aa	Predicted RBP	12	□□□□□ -0.49
NARF-222	ENST00000583908	ENTPD3	O75355	529 aa		12	□□□□□ -0.49
NARF-222	ENST00000583908	GLRX3	O76003	335 aa	Known RBP	12	□□□□□ -0.49
NARF-222	ENST00000583908	CYP7A1	P22680	504 aa		12	□□□□□ -0.49
NARF-222	ENST00000583908	ZNF157	P51786	506 aa	Predicted RBP	12	□□□□□ -0.49
NARF-222	ENST00000583908	FMR1	Q06787	632 aa	Known RBP eCLIP	12	□□□□□ -0.49	6e-10	■□□□□ 10.2
NARF-222	ENST00000583908	NOG	Q13253	232 aa		12	□□□□□ -0.49
NARF-222	ENST00000583908	GRM1	Q13255	1194 aa		12	□□□□□ -0.49
NARF-222	ENST00000583908	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	12	□□□□□ -0.49
NARF-222	ENST00000583908	TEX11	Q8IYF3	940 aa		12	□□□□□ -0.49
NARF-222	ENST00000583908	AIDA	Q96BJ3	306 aa		12	□□□□□ -0.49
NARF-222	ENST00000583908	CAPNS2	Q96L46	248 aa		12	□□□□□ -0.49
NARF-222	ENST00000583908	HAUS7	Q99871	368 aa		12	□□□□□ -0.49
NARF-222	ENST00000583908	BEGAIN	Q9BUH8	593 aa		12	□□□□□ -0.49
NARF-222	ENST00000583908	IDI2	Q9BXS1	227 aa		12	□□□□□ -0.49
NARF-222	ENST00000583908	BOLA2	Q9H3K6	86 aa		12	□□□□□ -0.49
NARF-222	ENST00000583908	ANGEL1	Q9UNK9	670 aa	Known RBP	12	□□□□□ -0.49
NARF-222	ENST00000583908	MYH2	Q9UKX2	1941 aa		11.99	□□□□□ -0.49
NARF-222	ENST00000583908	MX1	P20591	662 aa		11.99	□□□□□ -0.49
NARF-222	ENST00000583908	CACNB3	P54284	484 aa		11.99	□□□□□ -0.49
NARF-222	ENST00000583908	MAP2K1	Q02750	393 aa	Predicted RBP	11.99	□□□□□ -0.49
NARF-222	ENST00000583908	REM2	Q8IYK8	340 aa	Predicted RBP	11.99	□□□□□ -0.49
NARF-222	ENST00000583908	MAGEB6	Q8N7X4	407 aa		11.99	□□□□□ -0.49
NARF-222	ENST00000583908	TMEM39B	Q9GZU3	492 aa		11.99	□□□□□ -0.49
NARF-222	ENST00000583908	PIH1D3	Q9NQM4	214 aa	Known RBP	11.99	□□□□□ -0.49
NARF-222	ENST00000583908	SCAF8	Q9UPN6	1271 aa	Known RBP	11.99	□□□□□ -0.49
NARF-222	ENST00000583908	CSAD	Q9Y600	493 aa		11.99	□□□□□ -0.49
NARF-222	ENST00000583908	WDR33	Q9C0J8	1336 aa	Known RBP	11.99	□□□□□ -0.49
NARF-222	ENST00000583908	AKAP11	Q9UKA4	1901 aa		11.98	□□□□□ -0.49
NARF-222	ENST00000583908	COL2A1	P02458	1487 aa	Predicted RBP	11.98	□□□□□ -0.49
NARF-222	ENST00000583908	MAP2K2	P36507	400 aa		11.98	□□□□□ -0.49
NARF-222	ENST00000583908	VEGFB	P49765	207 aa		11.98	□□□□□ -0.49
NARF-222	ENST00000583908	TCP10	Q12799	353 aa		11.98	□□□□□ -0.49
NARF-222	ENST00000583908	PICALM	Q13492	652 aa		11.98	□□□□□ -0.49
NARF-222	ENST00000583908	NBPF12	Q5TAG4	269 aa	Predicted RBP	11.98	□□□□□ -0.49
NARF-222	ENST00000583908	SLC9C2	Q5TAH2	1124 aa		11.98	□□□□□ -0.49
NARF-222	ENST00000583908	PRAMEF18	Q5VWM3	479 aa		11.98	□□□□□ -0.49
NARF-222	ENST00000583908	CYP4F22	Q6NT55	531 aa		11.98	□□□□□ -0.49
NARF-222	ENST00000583908	ANKRD13A	Q8IZ07	590 aa		11.98	□□□□□ -0.49
NARF-222	ENST00000583908	DNAJC5G	Q8N7S2	189 aa		11.98	□□□□□ -0.49
NARF-222	ENST00000583908	JMY	Q8N9B5	988 aa		11.98	□□□□□ -0.49
NARF-222	ENST00000583908	DDRGK1	Q96HY6	314 aa		11.98	□□□□□ -0.49
NARF-222	ENST00000583908	TRIM34	Q9BYJ4	488 aa		11.98	□□□□□ -0.49
NARF-222	ENST00000583908	AATF	Q9NY61	560 aa	Known RBP eCLIP	11.98	□□□□□ -0.49
NARF-222	ENST00000583908	POLR2A	P24928	1970 aa	Known RBP	11.98	□□□□□ -0.49
NARF-222	ENST00000583908	RFX7	Q2KHR2	1363 aa		11.97	□□□□□ -0.49
NARF-222	ENST00000583908	HLA-DOA	P06340	250 aa		11.97	□□□□□ -0.49
NARF-222	ENST00000583908	ZFY	P08048	801 aa	Predicted RBP	11.97	□□□□□ -0.49
NARF-222	ENST00000583908	RGS3	P49796	1198 aa		11.97	□□□□□ -0.49
NARF-222	ENST00000583908	PPP4C	P60510	307 aa		11.97	□□□□□ -0.49
NARF-222	ENST00000583908	IRX6	P78412	446 aa	Predicted RBP	11.97	□□□□□ -0.49
NARF-222	ENST00000583908	PRKG1	Q13976	671 aa		11.97	□□□□□ -0.49
NARF-222	ENST00000583908	MAP3K11	Q16584	847 aa		11.97	□□□□□ -0.49
NARF-222	ENST00000583908	SMC5	Q8IY18	1101 aa		11.97	□□□□□ -0.49
NARF-222	ENST00000583908	AMOTL1	Q8IY63	956 aa		11.97	□□□□□ -0.49
NARF-222	ENST00000583908	CSRNP1	Q96S65	589 aa		11.97	□□□□□ -0.49
NARF-222	ENST00000583908	ZNF341	Q9BYN7	854 aa		11.97	□□□□□ -0.49
NARF-222	ENST00000583908	DHX36	Q9H2U1	1008 aa	Known RBP	11.97	□□□□□ -0.49
NARF-222	ENST00000583908	AOX1	Q06278	1338 aa		11.96	□□□□□ -0.49
NARF-222	ENST00000583908	DOCK2	Q92608	1830 aa		11.96	□□□□□ -0.49
NARF-222	ENST00000583908	MAGEB6P1	A0A0J9YX57	407 aa		11.96	□□□□□ -0.49
NARF-222	ENST00000583908	CA12	O43570	354 aa		11.96	□□□□□ -0.49
NARF-222	ENST00000583908	SLC10A3	P09131	477 aa		11.96	□□□□□ -0.49
NARF-222	ENST00000583908	PDE6A	P16499	860 aa		11.96	□□□□□ -0.49
NARF-222	ENST00000583908	USP5	P45974	858 aa		11.96	□□□□□ -0.49
NARF-222	ENST00000583908	SREBF2	Q12772	1141 aa		11.96	□□□□□ -0.49
NARF-222	ENST00000583908	NFIA	Q12857	509 aa		11.96	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms