RNA–Protein interactions for RNA: ENST00000583704.1

TTC19-210, Transcript of tetratricopeptide repeat domain 19, human

TSL 2

Gene TTC19, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TTC19-210	ENST00000583704	ZKSCAN4	Q969J2	545 aa	Predicted RBP	27.74	■■■□□ 2.03
TTC19-210	ENST00000583704	HOOK2	Q96ED9	719 aa		27.74	■■■□□ 2.03
TTC19-210	ENST00000583704	AK9	Q5TCS8	1911 aa		27.74	■■■□□ 2.03
TTC19-210	ENST00000583704	PDE4DIP	Q5VU43	2346 aa		27.74	■■■□□ 2.03
TTC19-210	ENST00000583704	SPDYE5	A6NIY4	337 aa		27.73	■■■□□ 2.03
TTC19-210	ENST00000583704	LDHB	P07195	334 aa	Known RBP	27.73	■■■□□ 2.03
TTC19-210	ENST00000583704	GNAI3	P08754	354 aa		27.73	■■■□□ 2.03
TTC19-210	ENST00000583704	FRAT1	Q92837	279 aa	Predicted RBP	27.73	■■■□□ 2.03
TTC19-210	ENST00000583704	ERO1A	Q96HE7	468 aa		27.73	■■■□□ 2.03
TTC19-210	ENST00000583704	DENND2A	Q9ULE3	1009 aa		27.73	■■■□□ 2.03
TTC19-210	ENST00000583704	SALL1	Q9NSC2	1324 aa		27.72	■■■□□ 2.03
TTC19-210	ENST00000583704	SRGAP3	O43295	1099 aa		27.72	■■■□□ 2.03
TTC19-210	ENST00000583704	DCAF15	Q66K64	600 aa		27.72	■■■□□ 2.03
TTC19-210	ENST00000583704	CDC42EP5	Q6NZY7	148 aa		27.72	■■■□□ 2.03
TTC19-210	ENST00000583704	MYH2	Q9UKX2	1941 aa		27.71	■■■□□ 2.03
TTC19-210	ENST00000583704	SEMA3E	O15041	775 aa		27.71	■■■□□ 2.03
TTC19-210	ENST00000583704	TCP10	Q12799	353 aa		27.71	■■■□□ 2.03
TTC19-210	ENST00000583704	CCDC102B	Q68D86	513 aa		27.71	■■■□□ 2.03
TTC19-210	ENST00000583704	MIGA2	Q7L4E1	593 aa		27.71	■■■□□ 2.03
TTC19-210	ENST00000583704	FAM151A	Q8WW52	585 aa		27.71	■■■□□ 2.03
TTC19-210	ENST00000583704	TNN	Q9UQP3	1299 aa		27.71	■■■□□ 2.03
TTC19-210	ENST00000583704	TRIM27	P14373	513 aa		27.7	■■■□□ 2.02
TTC19-210	ENST00000583704	SP3	Q02447	781 aa		27.7	■■■□□ 2.02
TTC19-210	ENST00000583704	NFIA	Q12857	509 aa		27.7	■■■□□ 2.02
TTC19-210	ENST00000583704	TAF1C	Q15572	869 aa	Predicted RBP	27.7	■■■□□ 2.02
TTC19-210	ENST00000583704	ERO1B	Q86YB8	467 aa		27.7	■■■□□ 2.02
TTC19-210	ENST00000583704	FAM43A	Q8N2R8	423 aa		27.7	■■■□□ 2.02
TTC19-210	ENST00000583704	CENPF	P49454	3210 aa		27.7	■■■□□ 2.02
TTC19-210	ENST00000583704	TIMM10	P62072	90 aa		27.69	■■■□□ 2.02
TTC19-210	ENST00000583704	MTX1	Q13505	466 aa		27.69	■■■□□ 2.02
TTC19-210	ENST00000583704	ATF7IP	Q6VMQ6	1270 aa		27.69	■■■□□ 2.02
TTC19-210	ENST00000583704	ZNF341	Q9BYN7	854 aa		27.69	■■■□□ 2.02
TTC19-210	ENST00000583704	ZBED9	Q6R2W3	1325 aa		27.68	■■■□□ 2.02
TTC19-210	ENST00000583704	IRF6	O14896	467 aa		27.68	■■■□□ 2.02
TTC19-210	ENST00000583704	CAP1	Q01518	475 aa		27.68	■■■□□ 2.02
TTC19-210	ENST00000583704	TFCP2	Q12800	502 aa		27.68	■■■□□ 2.02
TTC19-210	ENST00000583704	RASGRF1	Q13972	1273 aa		27.68	■■■□□ 2.02
TTC19-210	ENST00000583704	ZFYVE28	Q9HCC9	887 aa		27.68	■■■□□ 2.02
TTC19-210	ENST00000583704	USP40	Q9NVE5	1235 aa		27.68	■■■□□ 2.02
TTC19-210	ENST00000583704	INPP5B	P32019	993 aa		27.67	■■■□□ 2.02
TTC19-210	ENST00000583704	EFCC1	Q9HA90	598 aa		27.67	■■■□□ 2.02
TTC19-210	ENST00000583704	FAM198A	Q9UFP1	575 aa		27.67	■■■□□ 2.02
TTC19-210	ENST00000583704		A0A1B0GUL7	405 aa		27.66	■■■□□ 2.02
TTC19-210	ENST00000583704	CETP	P11597	493 aa		27.66	■■■□□ 2.02
TTC19-210	ENST00000583704	PPIL2	Q13356	520 aa		27.66	■■■□□ 2.02
TTC19-210	ENST00000583704	ZGPAT	Q8N5A5	531 aa	Known RBP	27.66	■■■□□ 2.02
TTC19-210	ENST00000583704	CLUAP1	Q96AJ1	413 aa		27.66	■■■□□ 2.02
TTC19-210	ENST00000583704	PTPN22	Q9Y2R2	807 aa		27.66	■■■□□ 2.02
TTC19-210	ENST00000583704	DOCK2	Q92608	1830 aa		27.66	■■■□□ 2.02
TTC19-210	ENST00000583704	ZBTB22	O15209	634 aa		27.65	■■■□□ 2.02
TTC19-210	ENST00000583704	SNAPC2	Q13487	334 aa		27.65	■■■□□ 2.02
TTC19-210	ENST00000583704	XAGE2	Q96GT9	111 aa		27.65	■■■□□ 2.02
TTC19-210	ENST00000583704	AKAP2	Q9Y2D5	859 aa		27.65	■■■□□ 2.02
TTC19-210	ENST00000583704	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	27.65	■■■□□ 2.02
TTC19-210	ENST00000583704	ZKSCAN2	Q63HK3	967 aa		27.64	■■■□□ 2.02
TTC19-210	ENST00000583704	DZIP1	Q86YF9	867 aa	Known RBP	27.64	■■■□□ 2.02
TTC19-210	ENST00000583704	ZFPM1	Q8IX07	1006 aa		27.64	■■■□□ 2.02
TTC19-210	ENST00000583704	ABCF2	Q9UG63	623 aa		27.64	■■■□□ 2.02
TTC19-210	ENST00000583704	PDS5A	Q29RF7	1337 aa	Known RBP	27.64	■■■□□ 2.01
TTC19-210	ENST00000583704	BTBD19	C9JJ37	291 aa		27.63	■■■□□ 2.01
TTC19-210	ENST00000583704	GNAI2	P04899	355 aa		27.63	■■■□□ 2.01
TTC19-210	ENST00000583704	ZNF112	Q9UJU3	913 aa		27.63	■■■□□ 2.01
TTC19-210	ENST00000583704	GAK	O14976	1311 aa		27.63	■■■□□ 2.01
TTC19-210	ENST00000583704	PPAT	Q06203	517 aa		27.62	■■■□□ 2.01
TTC19-210	ENST00000583704	MVP	Q14764	893 aa	Known RBP	27.62	■■■□□ 2.01
TTC19-210	ENST00000583704	ZSWIM8	A7E2V4	1837 aa		27.62	■■■□□ 2.01
TTC19-210	ENST00000583704	RFX7	Q2KHR2	1363 aa		27.61	■■■□□ 2.01
TTC19-210	ENST00000583704	PNMA6E	A0A0J9YXQ4	647 aa		27.61	■■■□□ 2.01
TTC19-210	ENST00000583704	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	27.61	■■■□□ 2.01
TTC19-210	ENST00000583704	NEUROD6	Q96NK8	337 aa		27.61	■■■□□ 2.01
TTC19-210	ENST00000583704	WDHD1	O75717	1129 aa	Predicted RBP	27.6	■■■□□ 2.01
TTC19-210	ENST00000583704	RGS3	P49796	1198 aa		27.6	■■■□□ 2.01
TTC19-210	ENST00000583704	ZCCHC17	Q9NP64	241 aa	Known RBP	27.6	■■■□□ 2.01
TTC19-210	ENST00000583704	RBBP6	Q7Z6E9	1792 aa	Known RBP	27.59	■■■□□ 2.01
TTC19-210	ENST00000583704	TLR2	O60603	784 aa		27.59	■■■□□ 2.01
TTC19-210	ENST00000583704	IDI2	Q9BXS1	227 aa		27.59	■■■□□ 2.01
TTC19-210	ENST00000583704	BRCA2	P51587	3418 aa		27.59	■■■□□ 2.01
TTC19-210	ENST00000583704	ATRNL1	Q5VV63	1379 aa		27.59	■■■□□ 2.01
TTC19-210	ENST00000583704	BTD	P43251	543 aa		27.58	■■■□□ 2.01
TTC19-210	ENST00000583704	NOL9	Q5SY16	702 aa	Known RBP	27.58	■■■□□ 2.01
TTC19-210	ENST00000583704	SPTY2D1	Q68D10	685 aa	Predicted RBP	27.58	■■■□□ 2.01
TTC19-210	ENST00000583704	SLF2	Q8IX21	1173 aa		27.58	■■■□□ 2.01
TTC19-210	ENST00000583704	TMEM57	Q8N5G2	664 aa		27.58	■■■□□ 2.01
TTC19-210	ENST00000583704	POTEF	A5A3E0	1075 aa		27.57	■■■□□ 2
TTC19-210	ENST00000583704	PI16	Q6UXB8	463 aa		27.57	■■■□□ 2
TTC19-210	ENST00000583704	ARMC5	Q96C12	935 aa		27.57	■■■□□ 2
TTC19-210	ENST00000583704	FAM163A	Q96GL9	167 aa	Predicted RBP	27.57	■■■□□ 2
TTC19-210	ENST00000583704	KCNH4	Q9UQ05	1017 aa		27.57	■■■□□ 2
TTC19-210	ENST00000583704	MROH7-TTC4	A0A0A0MT08	1334 aa		27.57	■■■□□ 2
TTC19-210	ENST00000583704	ENTPD3	O75355	529 aa		27.56	■■■□□ 2
TTC19-210	ENST00000583704	MECOM	Q03112	1051 aa		27.56	■■■□□ 2
TTC19-210	ENST00000583704	ARHGEF6	Q15052	776 aa		27.56	■■■□□ 2
TTC19-210	ENST00000583704	GORAB	Q5T7V8	394 aa		27.56	■■■□□ 2
TTC19-210	ENST00000583704	ERICH6	Q7L0X2	663 aa		27.56	■■■□□ 2
TTC19-210	ENST00000583704	SH3BP5L	Q7L8J4	393 aa		27.56	■■■□□ 2
TTC19-210	ENST00000583704	DDX4	Q9NQI0	724 aa	Known RBP	27.56	■■■□□ 2
TTC19-210	ENST00000583704	HMG20B	Q9P0W2	317 aa		27.56	■■■□□ 2
TTC19-210	ENST00000583704	G3BP1	Q13283	466 aa	Known RBP eCLIP	27.55	■■■□□ 2
TTC19-210	ENST00000583704	PICALM	Q13492	652 aa		27.55	■■■□□ 2
TTC19-210	ENST00000583704	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	27.55	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms