RNA–Protein interactions for RNA: ENST00000583282.5

GGA3-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-216ENST00000583282 ZBED3Q96IU2 234 aaPredicted RBP16.97■□□□□ 0.31
GGA3-216ENST00000583282 NOL10Q9BSC4 688 aaKnown RBP16.97■□□□□ 0.31
GGA3-216ENST00000583282 AATFQ9NY61 560 aaKnown RBP eCLIP16.97■□□□□ 0.31
GGA3-216ENST00000583282 POLR2AP24928 1970 aaKnown RBP16.97■□□□□ 0.31
GGA3-216ENST00000583282 ADM5C9JUS6 153 aa16.96■□□□□ 0.31
GGA3-216ENST00000583282 ADD2P35612 726 aa16.96■□□□□ 0.31
GGA3-216ENST00000583282 MMP14P50281 582 aa16.96■□□□□ 0.31
GGA3-216ENST00000583282 APOBEC3HQ6NTF7 200 aaKnown RBP16.96■□□□□ 0.31
GGA3-216ENST00000583282 EVI5LQ96CN4 794 aa16.96■□□□□ 0.31
GGA3-216ENST00000583282 TMOD2Q9NZR1 351 aa16.96■□□□□ 0.31
GGA3-216ENST00000583282 LDHCP07864 332 aa16.95■□□□□ 0.3
GGA3-216ENST00000583282 DYNLL1P63167 89 aaKnown RBP16.95■□□□□ 0.3
GGA3-216ENST00000583282 SPDYE2Q495Y8 402 aa16.95■□□□□ 0.3
GGA3-216ENST00000583282 ZNF70Q9UC06 446 aaPredicted RBP16.95■□□□□ 0.3
GGA3-216ENST00000583282 RFX7Q2KHR2 1363 aa16.94■□□□□ 0.3
GGA3-216ENST00000583282 DDX60LQ5H9U9 1706 aaKnown RBP16.94■□□□□ 0.3
GGA3-216ENST00000583282 TCRBV5S4A2TA0A5A2 114 aa16.94■□□□□ 0.3
GGA3-216ENST00000583282 TCP10L2B9ZVM9 353 aa16.94■□□□□ 0.3
GGA3-216ENST00000583282 ZSCAN25Q6NSZ9 544 aa16.94■□□□□ 0.3
GGA3-216ENST00000583282 CHADLQ6NUI6 762 aa16.94■□□□□ 0.3
GGA3-216ENST00000583282 CDC42EP5Q6NZY7 148 aa16.94■□□□□ 0.3
GGA3-216ENST00000583282 DCPSQ96C86 337 aaKnown RBP16.94■□□□□ 0.3
GGA3-216ENST00000583282 GLIS2Q9BZE0 524 aaPredicted RBP16.94■□□□□ 0.3
GGA3-216ENST00000583282 PICALMQ13492 652 aa16.93■□□□□ 0.3
GGA3-216ENST00000583282 KRT26Q7Z3Y9 468 aa16.93■□□□□ 0.3
GGA3-216ENST00000583282 APOBEC3FQ8IUX4 373 aaKnown RBP16.93■□□□□ 0.3
GGA3-216ENST00000583282 SULF1Q8IWU6 871 aa16.93■□□□□ 0.3
GGA3-216ENST00000583282 SMC1BQ8NDV3 1235 aa16.93■□□□□ 0.3
GGA3-216ENST00000583282 SH3RF3Q8TEJ3 882 aaPredicted RBP16.93■□□□□ 0.3
GGA3-216ENST00000583282 USP40Q9NVE5 1235 aa16.93■□□□□ 0.3
GGA3-216ENST00000583282 GPR75-ASB3A0A0A6YYF3 556 aa16.92■□□□□ 0.3
GGA3-216ENST00000583282 MAGEB6P1A0A0J9YX57 407 aa16.92■□□□□ 0.3
GGA3-216ENST00000583282 RNF113AO15541 343 aaKnown RBP16.92■□□□□ 0.3
GGA3-216ENST00000583282 TOMM70O94826 608 aa16.92■□□□□ 0.3
GGA3-216ENST00000583282 MBD4O95243 580 aa16.92■□□□□ 0.3
GGA3-216ENST00000583282 BAG3O95817 575 aa16.92■□□□□ 0.3
GGA3-216ENST00000583282 SDSP20132 328 aa16.92■□□□□ 0.3
GGA3-216ENST00000583282 LRRFIP1Q32MZ4 808 aaKnown RBP16.92■□□□□ 0.3
GGA3-216ENST00000583282 DLK2Q6UY11 383 aa16.92■□□□□ 0.3
GGA3-216ENST00000583282 TEX11Q8IYF3 940 aa16.92■□□□□ 0.3
GGA3-216ENST00000583282 LCORLQ8N3X6 602 aa16.92■□□□□ 0.3
GGA3-216ENST00000583282 ZC3H15Q8WU90 426 aaKnown RBP16.92■□□□□ 0.3
GGA3-216ENST00000583282 APPBP2Q92624 585 aa16.92■□□□□ 0.3
GGA3-216ENST00000583282 MRIQ9BWK5 157 aa16.92■□□□□ 0.3
GGA3-216ENST00000583282 PITPNM2Q9BZ72 1349 aa16.92■□□□□ 0.3
GGA3-216ENST00000583282 TRPM7Q96QT4 1865 aa16.91■□□□□ 0.3
GGA3-216ENST00000583282 M0R2C6 588 aa16.91■□□□□ 0.3
GGA3-216ENST00000583282 TRAF5O00463 557 aa16.91■□□□□ 0.3
GGA3-216ENST00000583282 RHBDL3P58872 404 aa16.91■□□□□ 0.3
GGA3-216ENST00000583282 TCP10Q12799 353 aa16.91■□□□□ 0.3
GGA3-216ENST00000583282 NFIAQ12857 509 aa16.91■□□□□ 0.3
GGA3-216ENST00000583282 UBE3CQ15386 1083 aa16.91■□□□□ 0.3
GGA3-216ENST00000583282 USP48Q86UV5 1035 aa16.91■□□□□ 0.3
GGA3-216ENST00000583282 RBM46Q8TBY0 533 aaKnown RBP16.91■□□□□ 0.3
GGA3-216ENST00000583282 FAM163AQ96GL9 167 aaPredicted RBP16.91■□□□□ 0.3
GGA3-216ENST00000583282 ARMT1Q9H993 441 aa16.91■□□□□ 0.3
GGA3-216ENST00000583282 MYH1P12882 1939 aa16.9■□□□□ 0.3
GGA3-216ENST00000583282 LAMB1P07942 1786 aa16.9■□□□□ 0.3
GGA3-216ENST00000583282 IGSF3O75054 1194 aa16.9■□□□□ 0.3
GGA3-216ENST00000583282 ZFYP08048 801 aaPredicted RBP16.9■□□□□ 0.3
GGA3-216ENST00000583282 FMR1Q06787 632 aaKnown RBP eCLIP16.9■□□□□ 0.3
GGA3-216ENST00000583282 AIDAQ96BJ3 306 aa16.9■□□□□ 0.3
GGA3-216ENST00000583282 RIOK1Q9BRS2 568 aaKnown RBP16.9■□□□□ 0.3
GGA3-216ENST00000583282 PUS7LQ9H0K6 701 aaKnown RBP16.9■□□□□ 0.3
GGA3-216ENST00000583282 ZNF408Q9H9D4 720 aa16.9■□□□□ 0.3
GGA3-216ENST00000583282 DIAPH3Q9NSV4 1193 aa16.9■□□□□ 0.3
GGA3-216ENST00000583282 BAZ2AQ9UIF9 1905 aaKnown RBP16.9■□□□□ 0.3
GGA3-216ENST00000583282 CNTNAP1P78357 1384 aa16.89■□□□□ 0.3
GGA3-216ENST00000583282 A0A0D9SFI3 127 aa16.89■□□□□ 0.29
GGA3-216ENST00000583282 WDHD1O75717 1129 aaPredicted RBP16.89■□□□□ 0.29
GGA3-216ENST00000583282 PLCG2P16885 1265 aa16.89■□□□□ 0.29
GGA3-216ENST00000583282 NMIQ13287 307 aaPredicted RBP16.89■□□□□ 0.29
GGA3-216ENST00000583282 TNFAIP1Q13829 316 aa16.89■□□□□ 0.29
GGA3-216ENST00000583282 SLC4A8Q2Y0W8 1093 aa16.89■□□□□ 0.29
GGA3-216ENST00000583282 PRAMEF18Q5VWM3 479 aa16.89■□□□□ 0.29
GGA3-216ENST00000583282 CCDC129Q6ZRS4 1044 aa16.89■□□□□ 0.29
GGA3-216ENST00000583282 MAPKAPK5Q8IW41 473 aa16.89■□□□□ 0.29
GGA3-216ENST00000583282 OSBP2Q969R2 916 aa16.89■□□□□ 0.29
GGA3-216ENST00000583282 FAM227BQ96M60 508 aa16.89■□□□□ 0.29
GGA3-216ENST00000583282 SEC62Q99442 399 aaKnown RBP16.89■□□□□ 0.29
GGA3-216ENST00000583282 DDX4Q9NQI0 724 aaKnown RBP16.89■□□□□ 0.29
GGA3-216ENST00000583282 PGAP2Q9UHJ9 254 aa16.89■□□□□ 0.29
GGA3-216ENST00000583282 SSC5DA1L4H1 1573 aa16.89■□□□□ 0.29
GGA3-216ENST00000583282 GPAA1O43292 621 aa16.88■□□□□ 0.29
GGA3-216ENST00000583282 USP5P45974 858 aa16.88■□□□□ 0.29
GGA3-216ENST00000583282 TNNI2P48788 182 aa16.88■□□□□ 0.29
GGA3-216ENST00000583282 RASA3Q14644 834 aa16.88■□□□□ 0.29
GGA3-216ENST00000583282 ZMYM1Q5SVZ6 1142 aa16.88■□□□□ 0.29
GGA3-216ENST00000583282 TMED8Q6PL24 325 aaPredicted RBP16.88■□□□□ 0.29
GGA3-216ENST00000583282 CDC37L1Q7L3B6 337 aa16.88■□□□□ 0.29
GGA3-216ENST00000583282 CDAN1Q8IWY9 1227 aa16.88■□□□□ 0.29
GGA3-216ENST00000583282 TGFBRAP1Q8WUH2 860 aa16.88■□□□□ 0.29
GGA3-216ENST00000583282 CDCA5Q96FF9 252 aa16.88■□□□□ 0.29
GGA3-216ENST00000583282 TMEM39BQ9GZU3 492 aa16.88■□□□□ 0.29
GGA3-216ENST00000583282 DEFB129Q9H1M3 183 aa16.88■□□□□ 0.29
GGA3-216ENST00000583282 FAM198AQ9UFP1 575 aa16.88■□□□□ 0.29
GGA3-216ENST00000583282 SIPA1L1O43166 1804 aa16.88■□□□□ 0.29
GGA3-216ENST00000583282 FLT1P17948 1338 aa16.88■□□□□ 0.29
GGA3-216ENST00000583282 OTOFQ9HC10 1997 aa16.88■□□□□ 0.29
GGA3-216ENST00000583282 BMP2KLQ5H9B9 411 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms