RNA–Protein interactions for RNA: ENST00000582788.5

ERBB2-212, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5

Gene ERBB2, Length 2,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-212ENST00000582788 GRAPQ13588 217 aa20.23■□□□□ 0.83
ERBB2-212ENST00000582788 SLC51AQ86UW1 340 aa20.23■□□□□ 0.83
ERBB2-212ENST00000582788 GRAPLQ8TC17 118 aaPredicted RBP20.23■□□□□ 0.83
ERBB2-212ENST00000582788 DDX19AQ9NUU7 478 aaKnown RBP20.23■□□□□ 0.83
ERBB2-212ENST00000582788 DACT1Q9NYF0 836 aa20.23■□□□□ 0.83
ERBB2-212ENST00000582788 HMGB2P26583 209 aaKnown RBP20.22■□□□□ 0.83
ERBB2-212ENST00000582788 STK3Q13188 491 aa20.22■□□□□ 0.83
ERBB2-212ENST00000582788 Q6ZUG5 572 aa20.22■□□□□ 0.83
ERBB2-212ENST00000582788 AKT1S1Q96B36 256 aa20.22■□□□□ 0.83
ERBB2-212ENST00000582788 CLSTN2Q9H4D0 955 aa20.22■□□□□ 0.83
ERBB2-212ENST00000582788 GNL3LQ9NVN8 582 aaKnown RBP20.22■□□□□ 0.83
ERBB2-212ENST00000582788 TFCP2L1Q9NZI6 479 aa20.22■□□□□ 0.83
ERBB2-212ENST00000582788 GOLGA6L6A8MZA4 724 aa20.22■□□□□ 0.83
ERBB2-212ENST00000582788 POLRMTO00411 1230 aaKnown RBP20.22■□□□□ 0.83
ERBB2-212ENST00000582788 HMGB1P09429 215 aaKnown RBP20.22■□□□□ 0.83
ERBB2-212ENST00000582788 HAND2P61296 217 aa20.22■□□□□ 0.83
ERBB2-212ENST00000582788 ST5P78524 1137 aa20.22■□□□□ 0.83
ERBB2-212ENST00000582788 CAMK4Q16566 473 aa20.22■□□□□ 0.83
ERBB2-212ENST00000582788 FBXO33Q7Z6M2 555 aa20.22■□□□□ 0.83
ERBB2-212ENST00000582788 TNMDQ9H2S6 317 aa20.22■□□□□ 0.83
ERBB2-212ENST00000582788 RGPD3A6NKT7 1758 aaPredicted RBP20.22■□□□□ 0.83
ERBB2-212ENST00000582788 RGPD4Q7Z3J3 1758 aa20.22■□□□□ 0.83
ERBB2-212ENST00000582788 RESTQ13127 1097 aa20.21■□□□□ 0.83
ERBB2-212ENST00000582788 IMMTQ16891 758 aaKnown RBP20.21■□□□□ 0.83
ERBB2-212ENST00000582788 DHX32Q7L7V1 743 aaKnown RBP20.21■□□□□ 0.83
ERBB2-212ENST00000582788 VPS37DQ86XT2 251 aa20.21■□□□□ 0.83
ERBB2-212ENST00000582788 STRBPQ96SI9 672 aaKnown RBP20.21■□□□□ 0.83
ERBB2-212ENST00000582788 TFIP11Q9UBB9 837 aaKnown RBP20.21■□□□□ 0.83
ERBB2-212ENST00000582788 JAK2O60674 1132 aa20.2■□□□□ 0.83
ERBB2-212ENST00000582788 EXOSC10Q01780 885 aaKnown RBP20.2■□□□□ 0.83
ERBB2-212ENST00000582788 CRY2Q49AN0 593 aa20.2■□□□□ 0.83
ERBB2-212ENST00000582788 SMAP1Q8IYB5 467 aaPredicted RBP20.2■□□□□ 0.83
ERBB2-212ENST00000582788 SPC24Q8NBT2 197 aa20.2■□□□□ 0.83
ERBB2-212ENST00000582788 AIDAQ96BJ3 306 aa20.2■□□□□ 0.83
ERBB2-212ENST00000582788 LRRC2Q9BYS8 371 aa20.2■□□□□ 0.83
ERBB2-212ENST00000582788 LRP2BPQ9P2M1 347 aa20.2■□□□□ 0.83
ERBB2-212ENST00000582788 EN1Q05925 392 aaPredicted RBP20.2■□□□□ 0.82
ERBB2-212ENST00000582788 LUZP1Q86V48 1076 aa20.2■□□□□ 0.82
ERBB2-212ENST00000582788 CBX8Q9HC52 389 aa20.2■□□□□ 0.82
ERBB2-212ENST00000582788 GOLGA6L4A6NEF3 574 aa20.19■□□□□ 0.82
ERBB2-212ENST00000582788 COL23A1Q86Y22 540 aaPredicted RBP20.19■□□□□ 0.82
ERBB2-212ENST00000582788 CKAP2LQ8IYA6 745 aa20.19■□□□□ 0.82
ERBB2-212ENST00000582788 PGBD1Q96JS3 809 aa20.19■□□□□ 0.82
ERBB2-212ENST00000582788 DENND2AQ9ULE3 1009 aa20.19■□□□□ 0.82
ERBB2-212ENST00000582788 IRS2Q9Y4H2 1338 aa20.19■□□□□ 0.82
ERBB2-212ENST00000582788 ANO6Q4KMQ2 910 aa20.19■□□□□ 0.82
ERBB2-212ENST00000582788 TXNRD3Q86VQ6 643 aa20.19■□□□□ 0.82
ERBB2-212ENST00000582788 RPGRQ92834 1020 aaKnown RBP20.19■□□□□ 0.82
ERBB2-212ENST00000582788 BRF1Q92994 677 aa20.19■□□□□ 0.82
ERBB2-212ENST00000582788 ABCF2Q9UG63 623 aa20.19■□□□□ 0.82
ERBB2-212ENST00000582788 MBD4O95243 580 aa20.18■□□□□ 0.82
ERBB2-212ENST00000582788 ZNF710Q8N1W2 664 aa20.18■□□□□ 0.82
ERBB2-212ENST00000582788 ZNF213O14771 459 aa20.17■□□□□ 0.82
ERBB2-212ENST00000582788 APPP05067 770 aa20.17■□□□□ 0.82
ERBB2-212ENST00000582788 HIBADHP31937 336 aaKnown RBP20.17■□□□□ 0.82
ERBB2-212ENST00000582788 TDRD7Q8NHU6 1098 aaKnown RBP20.17■□□□□ 0.82
ERBB2-212ENST00000582788 ARMT1Q9H993 441 aa20.17■□□□□ 0.82
ERBB2-212ENST00000582788 NR1I2O75469 434 aa20.17■□□□□ 0.82
ERBB2-212ENST00000582788 AGXT2Q9BYV1 514 aa20.17■□□□□ 0.82
ERBB2-212ENST00000582788 NBPF3Q9H094 633 aa20.17■□□□□ 0.82
ERBB2-212ENST00000582788 SEMA3EO15041 775 aa20.16■□□□□ 0.82
ERBB2-212ENST00000582788 PTGS1P23219 599 aa20.16■□□□□ 0.82
ERBB2-212ENST00000582788 CHST3Q7LGC8 479 aa20.16■□□□□ 0.82
ERBB2-212ENST00000582788 ADGRA1Q86SQ6 560 aa20.16■□□□□ 0.82
ERBB2-212ENST00000582788 TSC1Q92574 1164 aa20.16■□□□□ 0.82
ERBB2-212ENST00000582788 CAMKK2Q96RR4 588 aa20.16■□□□□ 0.82
ERBB2-212ENST00000582788 EPB41L4AQ9HCS5 686 aaPredicted RBP20.16■□□□□ 0.82
ERBB2-212ENST00000582788 ANKIB1Q9P2G1 1089 aa20.16■□□□□ 0.82
ERBB2-212ENST00000582788 MYH15Q9Y2K3 1946 aa20.15■□□□□ 0.82
ERBB2-212ENST00000582788 PATL2C9JE40 543 aaKnown RBP20.15■□□□□ 0.82
ERBB2-212ENST00000582788 EZH2Q15910 746 aaKnown RBP20.15■□□□□ 0.82
ERBB2-212ENST00000582788 LCORLQ8N3X6 602 aa20.15■□□□□ 0.82
ERBB2-212ENST00000582788 SMARCC2Q8TAQ2 1214 aa20.15■□□□□ 0.82
ERBB2-212ENST00000582788 ZSCAN16Q9H4T2 348 aaPredicted RBP20.15■□□□□ 0.82
ERBB2-212ENST00000582788 RAI14Q9P0K7 980 aa20.15■□□□□ 0.82
ERBB2-212ENST00000582788 CACNA1SQ13698 1873 aa20.15■□□□□ 0.82
ERBB2-212ENST00000582788 FGD1P98174 961 aa20.15■□□□□ 0.82
ERBB2-212ENST00000582788 PLA2G4DQ86XP0 818 aa20.15■□□□□ 0.82
ERBB2-212ENST00000582788 MIGA1Q8NAN2 632 aa20.15■□□□□ 0.82
ERBB2-212ENST00000582788 BICD2Q8TD16 824 aa20.15■□□□□ 0.82
ERBB2-212ENST00000582788 RBM17Q96I25 401 aaKnown RBP20.15■□□□□ 0.82
ERBB2-212ENST00000582788 KIF3AQ9Y496 699 aa20.15■□□□□ 0.82
ERBB2-212ENST00000582788 MYH13Q9UKX3 1938 aa20.15■□□□□ 0.82
ERBB2-212ENST00000582788 PNPLA7Q6ZV29 1317 aa20.15■□□□□ 0.82
ERBB2-212ENST00000582788 KLRG2A4D1S0 409 aaPredicted RBP20.14■□□□□ 0.81
ERBB2-212ENST00000582788 CYP7A1P22680 504 aa20.14■□□□□ 0.81
ERBB2-212ENST00000582788 ZNF75DP51815 510 aa20.14■□□□□ 0.81
ERBB2-212ENST00000582788 ALX1Q15699 326 aa20.14■□□□□ 0.81
ERBB2-212ENST00000582788 MB21D2Q8IYB1 491 aaPredicted RBP20.14■□□□□ 0.81
ERBB2-212ENST00000582788 IFNL3Q8IZI9 196 aa20.14■□□□□ 0.81
ERBB2-212ENST00000582788 NLGN1Q8N2Q7 840 aa20.14■□□□□ 0.81
ERBB2-212ENST00000582788 LLPHQ9BRT6 129 aaKnown RBP20.14■□□□□ 0.81
ERBB2-212ENST00000582788 PRDM4Q9UKN5 801 aa20.14■□□□□ 0.81
ERBB2-212ENST00000582788 LEMD3Q9Y2U8 911 aa20.14■□□□□ 0.81
ERBB2-212ENST00000582788 XDHP47989 1333 aa20.14■□□□□ 0.81
ERBB2-212ENST00000582788 PDS5AQ29RF7 1337 aaKnown RBP20.14■□□□□ 0.81
ERBB2-212ENST00000582788 GSG1L2A8MUP6 293 aa20.14■□□□□ 0.81
ERBB2-212ENST00000582788 PRKAB2O43741 272 aa20.14■□□□□ 0.81
ERBB2-212ENST00000582788 SCRN1Q12765 414 aa20.14■□□□□ 0.81
ERBB2-212ENST00000582788 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms