RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 DEFB129Q9H1M3 183 aa19.98■□□□□ 0.79
RNF43-206ENST00000582293 VEZTQ9HBM0 779 aa19.98■□□□□ 0.79
RNF43-206ENST00000582293 SSC5DA1L4H1 1573 aa19.98■□□□□ 0.79
RNF43-206ENST00000582293 IDH1O75874 414 aaKnown RBP19.97■□□□□ 0.79
RNF43-206ENST00000582293 PDE1AP54750 535 aa19.97■□□□□ 0.79
RNF43-206ENST00000582293 NFIAQ12857 509 aa19.97■□□□□ 0.79
RNF43-206ENST00000582293 NAA16Q6N069 864 aaPredicted RBP19.97■□□□□ 0.79
RNF43-206ENST00000582293 TEPSINQ96N21 525 aa19.97■□□□□ 0.79
RNF43-206ENST00000582293 TCP10L2B9ZVM9 353 aa19.96■□□□□ 0.79
RNF43-206ENST00000582293 IGSF3O75054 1194 aa19.96■□□□□ 0.79
RNF43-206ENST00000582293 CELF2O95319 508 aaKnown RBP19.96■□□□□ 0.79
RNF43-206ENST00000582293 PDE4AP27815 886 aa19.96■□□□□ 0.79
RNF43-206ENST00000582293 GSTO1P78417 241 aa19.96■□□□□ 0.79
RNF43-206ENST00000582293 RASA3Q14644 834 aa19.96■□□□□ 0.79
RNF43-206ENST00000582293 TTF1Q15361 905 aaPredicted RBP19.96■□□□□ 0.79
RNF43-206ENST00000582293 SLFNL1Q499Z3 407 aa19.96■□□□□ 0.79
RNF43-206ENST00000582293 GPATCH3Q96I76 525 aa19.96■□□□□ 0.79
RNF43-206ENST00000582293 USP40Q9NVE5 1235 aa19.96■□□□□ 0.79
RNF43-206ENST00000582293 FAM198AQ9UFP1 575 aa19.96■□□□□ 0.79
RNF43-206ENST00000582293 TCRBV5S4A2TA0A5A2 114 aa19.95■□□□□ 0.78
RNF43-206ENST00000582293 TMEM88BA6NKF7 163 aa19.95■□□□□ 0.78
RNF43-206ENST00000582293 FKBP1CQ5VVH2 108 aa19.95■□□□□ 0.78
RNF43-206ENST00000582293 PLEKHM2Q8IWE5 1019 aa19.95■□□□□ 0.78
RNF43-206ENST00000582293 SLF2Q8IX21 1173 aa19.95■□□□□ 0.78
RNF43-206ENST00000582293 MAGEB6Q8N7X4 407 aa19.95■□□□□ 0.78
RNF43-206ENST00000582293 ZNF408Q9H9D4 720 aa19.95■□□□□ 0.78
RNF43-206ENST00000582293 WDHD1O75717 1129 aaPredicted RBP19.94■□□□□ 0.78
RNF43-206ENST00000582293 MAP4K4O95819 1239 aaPredicted RBP19.94■□□□□ 0.78
RNF43-206ENST00000582293 LDHCP07864 332 aa19.94■□□□□ 0.78
RNF43-206ENST00000582293 PDE6AP16499 860 aa19.94■□□□□ 0.78
RNF43-206ENST00000582293 CYP7A1P22680 504 aa19.94■□□□□ 0.78
RNF43-206ENST00000582293 MAP3K12Q12852 859 aa19.94■□□□□ 0.78
RNF43-206ENST00000582293 ZFPM1Q8IX07 1006 aa19.94■□□□□ 0.78
RNF43-206ENST00000582293 TMEM39BQ9GZU3 492 aa19.94■□□□□ 0.78
RNF43-206ENST00000582293 DDX4Q9NQI0 724 aaKnown RBP19.94■□□□□ 0.78
RNF43-206ENST00000582293 CREBZFQ9NS37 354 aa19.94■□□□□ 0.78
RNF43-206ENST00000582293 PPP2R3BQ9Y5P8 575 aa19.94■□□□□ 0.78
RNF43-206ENST00000582293 CDK5RAP2Q96SN8 1893 aa19.93■□□□□ 0.78
RNF43-206ENST00000582293 GLRX3O76003 335 aaKnown RBP19.93■□□□□ 0.78
RNF43-206ENST00000582293 PPP4CP60510 307 aa19.93■□□□□ 0.78
RNF43-206ENST00000582293 NBPF12Q5TAG4 269 aaPredicted RBP19.93■□□□□ 0.78
RNF43-206ENST00000582293 IDI2Q9BXS1 227 aa19.93■□□□□ 0.78
RNF43-206ENST00000582293 ZBTB47Q9UFB7 747 aaPredicted RBP19.93■□□□□ 0.78
RNF43-206ENST00000582293 MYH7P12883 1935 aa19.93■□□□□ 0.78
RNF43-206ENST00000582293 ADD2P35612 726 aa19.92■□□□□ 0.78
RNF43-206ENST00000582293 DYNLL1P63167 89 aaKnown RBP19.92■□□□□ 0.78
RNF43-206ENST00000582293 SLC9C2Q5TAH2 1124 aa19.92■□□□□ 0.78
RNF43-206ENST00000582293 MOB2Q70IA6 237 aa19.92■□□□□ 0.78
RNF43-206ENST00000582293 FAM83AQ86UY5 434 aa19.92■□□□□ 0.78
RNF43-206ENST00000582293 SH3RF3Q8TEJ3 882 aaPredicted RBP19.92■□□□□ 0.78
RNF43-206ENST00000582293 OSBPL3Q9H4L5 887 aa19.92■□□□□ 0.78
RNF43-206ENST00000582293 AATFQ9NY61 560 aaKnown RBP eCLIP19.92■□□□□ 0.78
RNF43-206ENST00000582293 FZD1Q9UP38 647 aa19.92■□□□□ 0.78
RNF43-206ENST00000582293 ZNF532Q9HCE3 1301 aa19.92■□□□□ 0.78
RNF43-206ENST00000582293 FOCADQ5VW36 1801 aa19.91■□□□□ 0.78
RNF43-206ENST00000582293 ERC2O15083 957 aa19.91■□□□□ 0.78
RNF43-206ENST00000582293 TNFAIP1Q13829 316 aa19.91■□□□□ 0.78
RNF43-206ENST00000582293 SH3BP5LQ7L8J4 393 aa19.91■□□□□ 0.78
RNF43-206ENST00000582293 KBTBD3Q8NAB2 608 aa19.91■□□□□ 0.78
RNF43-206ENST00000582293 MIGA1Q8NAN2 632 aa19.91■□□□□ 0.78
RNF43-206ENST00000582293 RIOK1Q9BRS2 568 aaKnown RBP19.91■□□□□ 0.78
RNF43-206ENST00000582293 TLL2Q9Y6L7 1015 aa19.91■□□□□ 0.78
RNF43-206ENST00000582293 PAPPA2Q9BXP8 1791 aa19.9■□□□□ 0.78
RNF43-206ENST00000582293 NEFLP07196 543 aa19.9■□□□□ 0.78
RNF43-206ENST00000582293 RGS3P49796 1198 aa19.9■□□□□ 0.78
RNF43-206ENST00000582293 SAPCD2Q86UD0 394 aa19.9■□□□□ 0.78
RNF43-206ENST00000582293 FAM151AQ8WW52 585 aa19.9■□□□□ 0.78
RNF43-206ENST00000582293 GBA2Q9HCG7 927 aaPredicted RBP19.9■□□□□ 0.78
RNF43-206ENST00000582293 TMOD2Q9NZR1 351 aa19.9■□□□□ 0.78
RNF43-206ENST00000582293 RPAP1Q9BWH6 1393 aaPredicted RBP19.9■□□□□ 0.78
RNF43-206ENST00000582293 TNNI2P48788 182 aa19.89■□□□□ 0.77
RNF43-206ENST00000582293 TCP10Q12799 353 aa19.89■□□□□ 0.77
RNF43-206ENST00000582293 TMED8Q6PL24 325 aaPredicted RBP19.89■□□□□ 0.77
RNF43-206ENST00000582293 DNAJC5GQ8N7S2 189 aa19.89■□□□□ 0.77
RNF43-206ENST00000582293 UBE3CQ15386 1083 aa19.88■□□□□ 0.77
RNF43-206ENST00000582293 TEX11Q8IYF3 940 aa19.88■□□□□ 0.77
RNF43-206ENST00000582293 ATRNL1Q5VV63 1379 aa19.87■□□□□ 0.77
RNF43-206ENST00000582293 RASSF10A6NK89 507 aa19.87■□□□□ 0.77
RNF43-206ENST00000582293 ENTPD3O75355 529 aa19.87■□□□□ 0.77
RNF43-206ENST00000582293 NPM3O75607 178 aaKnown RBP19.87■□□□□ 0.77
RNF43-206ENST00000582293 BAG3O95817 575 aa19.87■□□□□ 0.77
RNF43-206ENST00000582293 PICALMQ13492 652 aa19.87■□□□□ 0.77
RNF43-206ENST00000582293 CENPQQ7L2Z9 268 aaPredicted RBP19.87■□□□□ 0.77
RNF43-206ENST00000582293 SKAP1Q86WV1 359 aa19.87■□□□□ 0.77
RNF43-206ENST00000582293 ABT1Q9ULW3 272 aaKnown RBP19.87■□□□□ 0.77
RNF43-206ENST00000582293 SIPA1L1O43166 1804 aa19.86■□□□□ 0.77
RNF43-206ENST00000582293 CEP350Q5VT06 3117 aa19.86■□□□□ 0.77
RNF43-206ENST00000582293 DDX60LQ5H9U9 1706 aaKnown RBP19.86■□□□□ 0.77
RNF43-206ENST00000582293 DDTLA6NHG4 134 aaPredicted RBP19.86■□□□□ 0.77
RNF43-206ENST00000582293 SLURP2P0DP57 97 aa19.86■□□□□ 0.77
RNF43-206ENST00000582293 PRKG1Q13976 671 aa19.86■□□□□ 0.77
RNF43-206ENST00000582293 LCORLQ8N3X6 602 aa19.86■□□□□ 0.77
RNF43-206ENST00000582293 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.86■□□□□ 0.77
RNF43-206ENST00000582293 PUS7LQ9H0K6 701 aaKnown RBP19.86■□□□□ 0.77
RNF43-206ENST00000582293 OTOFQ9HC10 1997 aa19.85■□□□□ 0.77
RNF43-206ENST00000582293 MAGEB6P1A0A0J9YX57 407 aa19.85■□□□□ 0.77
RNF43-206ENST00000582293 UBE2Q2LH0YL09 131 aa19.85■□□□□ 0.77
RNF43-206ENST00000582293 USP2O75604 605 aaPredicted RBP19.85■□□□□ 0.77
RNF43-206ENST00000582293 PLCG2P16885 1265 aa19.85■□□□□ 0.77
RNF43-206ENST00000582293 FKBP1BP68106 108 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms