RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 PLCD1P51178 756 aa16.3■□□□□ 0.2
CSNK1D-217ENST00000581241 SLC27A2O14975 620 aa16.3■□□□□ 0.2
CSNK1D-217ENST00000581241 PCK1P35558 622 aa16.3■□□□□ 0.2
CSNK1D-217ENST00000581241 DCAF17Q5H9S7 520 aaPredicted RBP16.3■□□□□ 0.2
CSNK1D-217ENST00000581241 ANO1Q5XXA6 986 aa16.3■□□□□ 0.2
CSNK1D-217ENST00000581241 CSRNP2Q9H175 543 aa16.3■□□□□ 0.2
CSNK1D-217ENST00000581241 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.3■□□□□ 0.2
CSNK1D-217ENST00000581241 VWA3AA6NCI4 1184 aa16.3■□□□□ 0.2
CSNK1D-217ENST00000581241 PLIN2Q99541 437 aa16.3■□□□□ 0.2
CSNK1D-217ENST00000581241 MAK16Q9BXY0 300 aaKnown RBP16.3■□□□□ 0.2
CSNK1D-217ENST00000581241 ACTN4O43707 911 aaKnown RBP16.29■□□□□ 0.2
CSNK1D-217ENST00000581241 FAM169AQ9Y6X4 670 aa16.29■□□□□ 0.2
CSNK1D-217ENST00000581241 GOLGA6BA6NDN3 693 aa16.29■□□□□ 0.2
CSNK1D-217ENST00000581241 SPDYE3A6NKU9 549 aa16.29■□□□□ 0.2
CSNK1D-217ENST00000581241 UTP14CQ5TAP6 766 aaKnown RBP16.29■□□□□ 0.2
CSNK1D-217ENST00000581241 CNNM4Q6P4Q7 775 aa16.29■□□□□ 0.2
CSNK1D-217ENST00000581241 CROCCP2Q86T23 111 aa16.29■□□□□ 0.2
CSNK1D-217ENST00000581241 NOX5Q96PH1 765 aa16.29■□□□□ 0.2
CSNK1D-217ENST00000581241 MKRN1Q9UHC7 482 aaKnown RBP16.29■□□□□ 0.2
CSNK1D-217ENST00000581241 DUOX2Q9NRD8 1548 aa16.29■□□□□ 0.2
CSNK1D-217ENST00000581241 ZNF174Q15697 407 aa16.29■□□□□ 0.2
CSNK1D-217ENST00000581241 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.29■□□□□ 0.2
CSNK1D-217ENST00000581241 VPS16Q9H269 839 aa16.29■□□□□ 0.2
CSNK1D-217ENST00000581241 TAOK1Q7L7X3 1001 aa16.29■□□□□ 0.2
CSNK1D-217ENST00000581241 PLCB1Q9NQ66 1216 aa16.29■□□□□ 0.2
CSNK1D-217ENST00000581241 SNX14Q9Y5W7 946 aa16.29■□□□□ 0.2
CSNK1D-217ENST00000581241 TNNI2P48788 182 aa16.29■□□□□ 0.2
CSNK1D-217ENST00000581241 NEDD9Q14511 834 aa16.29■□□□□ 0.2
CSNK1D-217ENST00000581241 CUTAO60888 179 aa16.28■□□□□ 0.2
CSNK1D-217ENST00000581241 RXRAP19793 462 aa16.28■□□□□ 0.2
CSNK1D-217ENST00000581241 PPM1FP49593 454 aaPredicted RBP16.28■□□□□ 0.2
CSNK1D-217ENST00000581241 TTLL12Q14166 644 aaPredicted RBP16.28■□□□□ 0.2
CSNK1D-217ENST00000581241 ZNF804AQ7Z570 1209 aa16.28■□□□□ 0.2
CSNK1D-217ENST00000581241 KIFAP3Q92845 792 aa16.28■□□□□ 0.2
CSNK1D-217ENST00000581241 FRMD4BQ9Y2L6 1034 aa16.28■□□□□ 0.2
CSNK1D-217ENST00000581241 KCNH3Q9ULD8 1083 aa16.28■□□□□ 0.2
CSNK1D-217ENST00000581241 ZWINTO95229 277 aa16.28■□□□□ 0.2
CSNK1D-217ENST00000581241 RILPL1Q5EBL4 403 aa16.28■□□□□ 0.2
CSNK1D-217ENST00000581241 KDM2BQ8NHM5 1336 aa16.28■□□□□ 0.2
CSNK1D-217ENST00000581241 RUFY4Q6ZNE9 571 aa16.28■□□□□ 0.2
CSNK1D-217ENST00000581241 C17orf53Q8N3J3 647 aaPredicted RBP16.28■□□□□ 0.2
CSNK1D-217ENST00000581241 FEZ2Q9UHY8 353 aaPredicted RBP16.28■□□□□ 0.2
CSNK1D-217ENST00000581241 MAP3K5Q99683 1374 aa16.28■□□□□ 0.2
CSNK1D-217ENST00000581241 CALUO43852 315 aaPredicted RBP16.28■□□□□ 0.2
CSNK1D-217ENST00000581241 ERCC6LQ2NKX8 1250 aa16.28■□□□□ 0.2
CSNK1D-217ENST00000581241 UGGT2Q9NYU1 1516 aa16.27■□□□□ 0.2
CSNK1D-217ENST00000581241 TNFAIP3P21580 790 aa16.27■□□□□ 0.2
CSNK1D-217ENST00000581241 TBC1D8BQ0IIM8 1120 aa16.27■□□□□ 0.2
CSNK1D-217ENST00000581241 PAK1Q13153 545 aa16.27■□□□□ 0.2
CSNK1D-217ENST00000581241 IDI1Q13907 227 aa16.27■□□□□ 0.2
CSNK1D-217ENST00000581241 TSNAXIP1Q2TAA8 658 aa16.27■□□□□ 0.2
CSNK1D-217ENST00000581241 EIF4A2Q14240 407 aaKnown RBP16.27■□□□□ 0.2
CSNK1D-217ENST00000581241 UBL4BQ8N7F7 174 aa16.27■□□□□ 0.2
CSNK1D-217ENST00000581241 MIPOL1Q8TD10 442 aa16.27■□□□□ 0.2
CSNK1D-217ENST00000581241 PDE4DQ08499 809 aa16.27■□□□□ 0.2
CSNK1D-217ENST00000581241 TMTC1Q8IUR5 882 aa16.27■□□□□ 0.2
CSNK1D-217ENST00000581241 KDM5BQ9UGL1 1544 aa16.27■□□□□ 0.19
CSNK1D-217ENST00000581241 PICALMQ13492 652 aa16.27■□□□□ 0.19
CSNK1D-217ENST00000581241 GKAP1Q5VSY0 366 aaPredicted RBP16.27■□□□□ 0.19
CSNK1D-217ENST00000581241 TSPYL6Q8N831 410 aa16.27■□□□□ 0.19
CSNK1D-217ENST00000581241 LINS1Q8NG48 757 aa16.27■□□□□ 0.19
CSNK1D-217ENST00000581241 TSKSQ9UJT2 592 aa16.27■□□□□ 0.19
CSNK1D-217ENST00000581241 FOXO3O43524 673 aa16.27■□□□□ 0.19
CSNK1D-217ENST00000581241 DEXIO95424 95 aa16.27■□□□□ 0.19
CSNK1D-217ENST00000581241 CLUL1Q15846 466 aa16.27■□□□□ 0.19
CSNK1D-217ENST00000581241 UAP1Q16222 522 aaPredicted RBP16.27■□□□□ 0.19
CSNK1D-217ENST00000581241 MLKLQ8NB16 471 aa16.27■□□□□ 0.19
CSNK1D-217ENST00000581241 BICC1Q9H694 974 aaKnown RBP16.27■□□□□ 0.19
CSNK1D-217ENST00000581241 ZBTB7BO15156 539 aaPredicted RBP16.26■□□□□ 0.19
CSNK1D-217ENST00000581241 MTMR3Q13615 1198 aa16.26■□□□□ 0.19
CSNK1D-217ENST00000581241 NBPF6Q5VWK0 638 aa16.26■□□□□ 0.19
CSNK1D-217ENST00000581241 NBPF5PQ86XG9 351 aaPredicted RBP16.26■□□□□ 0.19
CSNK1D-217ENST00000581241 RPUSD2Q8IZ73 545 aaKnown RBP16.26■□□□□ 0.19
CSNK1D-217ENST00000581241 TTC16Q8NEE8 873 aa16.26■□□□□ 0.19
CSNK1D-217ENST00000581241 NBPF4Q96M43 638 aa16.26■□□□□ 0.19
CSNK1D-217ENST00000581241 HDAC9Q9UKV0 1011 aa16.26■□□□□ 0.19
CSNK1D-217ENST00000581241 ODF2LQ9ULJ1 636 aa16.26■□□□□ 0.19
CSNK1D-217ENST00000581241 ARHGAP6O43182 974 aa16.26■□□□□ 0.19
CSNK1D-217ENST00000581241 LMBRD1Q9NUN5 540 aa16.26■□□□□ 0.19
CSNK1D-217ENST00000581241 ZNF219Q9P2Y4 722 aaPredicted RBP16.26■□□□□ 0.19
CSNK1D-217ENST00000581241 CPA1P15085 419 aa16.26■□□□□ 0.19
CSNK1D-217ENST00000581241 ERCC5P28715 1186 aaPredicted RBP16.26■□□□□ 0.19
CSNK1D-217ENST00000581241 MTHFSDQ2M296 383 aaKnown RBP16.26■□□□□ 0.19
CSNK1D-217ENST00000581241 VCX3BQ9H321 246 aa16.26■□□□□ 0.19
CSNK1D-217ENST00000581241 CLGNO14967 610 aa16.26■□□□□ 0.19
CSNK1D-217ENST00000581241 FBLN1P23142 703 aa16.26■□□□□ 0.19
CSNK1D-217ENST00000581241 PAK2Q13177 524 aa16.26■□□□□ 0.19
CSNK1D-217ENST00000581241 ABCC1P33527 1531 aa16.26■□□□□ 0.19
CSNK1D-217ENST00000581241 TRAF5O00463 557 aa16.25■□□□□ 0.19
CSNK1D-217ENST00000581241 LEO1Q8WVC0 666 aaPredicted RBP16.25■□□□□ 0.19
CSNK1D-217ENST00000581241 IQSEC3Q9UPP2 1182 aaPredicted RBP16.25■□□□□ 0.19
CSNK1D-217ENST00000581241 SPOPO43791 374 aa16.25■□□□□ 0.19
CSNK1D-217ENST00000581241 KRT5P13647 590 aa16.25■□□□□ 0.19
CSNK1D-217ENST00000581241 FBXO31Q5XUX0 539 aaPredicted RBP16.25■□□□□ 0.19
CSNK1D-217ENST00000581241 CEP120Q8N960 986 aa16.25■□□□□ 0.19
CSNK1D-217ENST00000581241 FAM184BQ9ULE4 1060 aa16.25■□□□□ 0.19
CSNK1D-217ENST00000581241 AGTPBP1Q9UPW5 1226 aa16.25■□□□□ 0.19
CSNK1D-217ENST00000581241 GADD45BO75293 160 aaPredicted RBP16.25■□□□□ 0.19
CSNK1D-217ENST00000581241 PARP1P09874 1014 aaKnown RBP16.25■□□□□ 0.19
CSNK1D-217ENST00000581241 PPFIA1Q13136 1202 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms