RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 CCDC97Q96F63 343 aaPredicted RBP6.77□□□□□ -1.33
SMG8-205ENST00000580798 TRIM56Q9BRZ2 755 aaKnown RBP6.77□□□□□ -1.33
SMG8-205ENST00000580798 GRIA4P48058 902 aa6.76□□□□□ -1.33
SMG8-205ENST00000580798 SPRED3Q2MJR0 410 aa6.76□□□□□ -1.33
SMG8-205ENST00000580798 CILP2Q8IUL8 1156 aa6.76□□□□□ -1.33
SMG8-205ENST00000580798 PI4K2BQ8TCG2 481 aa6.76□□□□□ -1.33
SMG8-205ENST00000580798 ZFYVE1Q9HBF4 777 aa6.76□□□□□ -1.33
SMG8-205ENST00000580798 VAV3Q9UKW4 847 aa6.76□□□□□ -1.33
SMG8-205ENST00000580798 U3KQE9 123 aa6.76□□□□□ -1.33
SMG8-205ENST00000580798 AOC2O75106 756 aa6.75□□□□□ -1.33
SMG8-205ENST00000580798 ZNF865P0CJ78 1059 aaPredicted RBP6.75□□□□□ -1.33
SMG8-205ENST00000580798 CCNJLQ8IV13 435 aa6.75□□□□□ -1.33
SMG8-205ENST00000580798 FAM84AQ96KN4 292 aa6.75□□□□□ -1.33
SMG8-205ENST00000580798 CORO1BQ9BR76 489 aa6.75□□□□□ -1.33
SMG8-205ENST00000580798 WDR18Q9BV38 432 aa6.75□□□□□ -1.33
SMG8-205ENST00000580798 PPP1R9AQ9ULJ8 1098 aa6.75□□□□□ -1.33
SMG8-205ENST00000580798 POLR3DP05423 398 aaPredicted RBP6.74□□□□□ -1.33
SMG8-205ENST00000580798 FAM87AP0C7U9 286 aa6.74□□□□□ -1.33
SMG8-205ENST00000580798 PRKCQQ04759 706 aa6.74□□□□□ -1.33
SMG8-205ENST00000580798 EHHADHQ08426 723 aa6.74□□□□□ -1.33
SMG8-205ENST00000580798 CDK5R2Q13319 367 aa6.74□□□□□ -1.33
SMG8-205ENST00000580798 ALKBH2Q6NS38 261 aa6.74□□□□□ -1.33
SMG8-205ENST00000580798 TCF12Q99081 682 aa6.74□□□□□ -1.33
SMG8-205ENST00000580798 ZFYVE28Q9HCC9 887 aa6.74□□□□□ -1.33
SMG8-205ENST00000580798 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.74□□□□□ -1.33
SMG8-205ENST00000580798 SERPINA10Q9UK55 444 aa6.74□□□□□ -1.33
SMG8-205ENST00000580798 ARID3CA6NKF2 412 aa6.73□□□□□ -1.33
SMG8-205ENST00000580798 MTMR3Q13615 1198 aa6.73□□□□□ -1.33
SMG8-205ENST00000580798 LCE5AQ5TCM9 118 aa6.73□□□□□ -1.33
SMG8-205ENST00000580798 BHLHE22Q8NFJ8 381 aaPredicted RBP6.73□□□□□ -1.33
SMG8-205ENST00000580798 A0A1W2PP55 124 aa6.72□□□□□ -1.33
SMG8-205ENST00000580798 LRRC10BA6NIK2 292 aa6.72□□□□□ -1.33
SMG8-205ENST00000580798 B3GALT4O96024 378 aa6.72□□□□□ -1.33
SMG8-205ENST00000580798 AOC3Q16853 763 aa6.72□□□□□ -1.33
SMG8-205ENST00000580798 GTF3C2Q8WUA4 911 aaPredicted RBP6.72□□□□□ -1.33
SMG8-205ENST00000580798 LIN7BQ9HAP6 207 aa6.72□□□□□ -1.33
SMG8-205ENST00000580798 SYNGAP1Q96PV0 1343 aa6.72□□□□□ -1.33
SMG8-205ENST00000580798 TMPRSS2O15393 492 aa6.71□□□□□ -1.34
SMG8-205ENST00000580798 USP5P45974 858 aa6.71□□□□□ -1.34
SMG8-205ENST00000580798 AAMPQ13685 434 aa6.71□□□□□ -1.34
SMG8-205ENST00000580798 PDE3AQ14432 1141 aa6.71□□□□□ -1.34
SMG8-205ENST00000580798 IFI16Q16666 785 aaKnown RBP6.71□□□□□ -1.34
SMG8-205ENST00000580798 ZNF503-AS2A6NEH8 195 aa6.7□□□□□ -1.34
SMG8-205ENST00000580798 NPR3P17342 541 aa6.7□□□□□ -1.34
SMG8-205ENST00000580798 CFPP27918 469 aa6.7□□□□□ -1.34
SMG8-205ENST00000580798 C1QL4Q86Z23 238 aa6.7□□□□□ -1.34
SMG8-205ENST00000580798 FLAD1Q8NFF5 587 aa6.7□□□□□ -1.34
SMG8-205ENST00000580798 DDX54Q8TDD1 881 aaKnown RBP6.7□□□□□ -1.34
SMG8-205ENST00000580798 HRASLS5Q96KN8 279 aa6.7□□□□□ -1.34
SMG8-205ENST00000580798 MKNK2Q9HBH9 465 aa6.7□□□□□ -1.34
SMG8-205ENST00000580798 CRIM1Q9NZV1 1036 aa6.7□□□□□ -1.34
SMG8-205ENST00000580798 PLAGL2Q9UPG8 496 aa6.7□□□□□ -1.34
SMG8-205ENST00000580798 FZD6O60353 706 aa6.69□□□□□ -1.34
SMG8-205ENST00000580798 CEACAM5P06731 702 aa6.69□□□□□ -1.34
SMG8-205ENST00000580798 OXCT1P55809 520 aa6.69□□□□□ -1.34
SMG8-205ENST00000580798 MLANAQ16655 118 aa6.69□□□□□ -1.34
SMG8-205ENST00000580798 ANGEL2Q5VTE6 544 aaKnown RBP6.69□□□□□ -1.34
SMG8-205ENST00000580798 SLC23A3Q6PIS1 610 aa6.69□□□□□ -1.34
SMG8-205ENST00000580798 LCNL1Q6ZST4 164 aa6.69□□□□□ -1.34
SMG8-205ENST00000580798 ZSWIM9Q86XI8 627 aa6.69□□□□□ -1.34
SMG8-205ENST00000580798 GALNT12Q8IXK2 581 aa6.69□□□□□ -1.34
SMG8-205ENST00000580798 WDR89Q96FK6 387 aaPredicted RBP6.69□□□□□ -1.34
SMG8-205ENST00000580798 TOX2Q96NM4 488 aa6.69□□□□□ -1.34
SMG8-205ENST00000580798 FANCD2OSQ96PS1 177 aa6.69□□□□□ -1.34
SMG8-205ENST00000580798 ZNF576Q9H609 170 aa6.69□□□□□ -1.34
SMG8-205ENST00000580798 TIMELESSQ9UNS1 1208 aa6.69□□□□□ -1.34
SMG8-205ENST00000580798 LEFTY1O75610 366 aa6.68□□□□□ -1.34
SMG8-205ENST00000580798 LIG1P18858 919 aa6.68□□□□□ -1.34
SMG8-205ENST00000580798 RAP1GAPP47736 663 aa6.68□□□□□ -1.34
SMG8-205ENST00000580798 LILRA6Q6PI73 481 aa6.68□□□□□ -1.34
SMG8-205ENST00000580798 GJD3Q8N144 294 aa6.68□□□□□ -1.34
SMG8-205ENST00000580798 PIDD1Q9HB75 910 aa6.68□□□□□ -1.34
SMG8-205ENST00000580798 PRDM7Q9NQW5 492 aa6.68□□□□□ -1.34
SMG8-205ENST00000580798 TMEM265A0A087WTH1 108 aa6.67□□□□□ -1.34
SMG8-205ENST00000580798 KCNMB1Q16558 191 aa6.67□□□□□ -1.34
SMG8-205ENST00000580798 SMYD4Q8IYR2 804 aaPredicted RBP6.67□□□□□ -1.34
SMG8-205ENST00000580798 ATXN3LQ9H3M9 355 aa6.67□□□□□ -1.34
SMG8-205ENST00000580798 FAM53CQ9NYF3 392 aa6.67□□□□□ -1.34
SMG8-205ENST00000580798 TMEM88BA6NKF7 163 aa6.66□□□□□ -1.34
SMG8-205ENST00000580798 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.66□□□□□ -1.34
SMG8-205ENST00000580798 TSPAN15O95858 294 aa6.66□□□□□ -1.34
SMG8-205ENST00000580798 ITPKAP23677 461 aa6.66□□□□□ -1.34
SMG8-205ENST00000580798 AP3B2Q13367 1082 aa6.66□□□□□ -1.34
SMG8-205ENST00000580798 ARHGAP27Q6ZUM4 889 aa6.66□□□□□ -1.34
SMG8-205ENST00000580798 CCDC82Q8N4S0 544 aa6.66□□□□□ -1.34
SMG8-205ENST00000580798 DUSP23Q9BVJ7 150 aa6.66□□□□□ -1.34
SMG8-205ENST00000580798 CCDC86Q9H6F5 360 aaKnown RBP6.66□□□□□ -1.34
SMG8-205ENST00000580798 CCDC87Q9NVE4 849 aa6.66□□□□□ -1.34
SMG8-205ENST00000580798 NCANO14594 1321 aa6.66□□□□□ -1.34
SMG8-205ENST00000580798 ID3Q02535 119 aa6.65□□□□□ -1.34
SMG8-205ENST00000580798 LRRC56Q8IYG6 542 aaPredicted RBP6.65□□□□□ -1.34
SMG8-205ENST00000580798 ZSCAN18Q8TBC5 510 aaPredicted RBP6.65□□□□□ -1.34
SMG8-205ENST00000580798 LIN37Q96GY3 246 aaPredicted RBP6.65□□□□□ -1.34
SMG8-205ENST00000580798 TNKS2Q9H2K2 1166 aa6.65□□□□□ -1.34
SMG8-205ENST00000580798 DISC1Q9NRI5 854 aa6.65□□□□□ -1.34
SMG8-205ENST00000580798 PRRG2O14669 202 aa6.64□□□□□ -1.35
SMG8-205ENST00000580798 ZNF862O60290 1169 aa6.64□□□□□ -1.35
SMG8-205ENST00000580798 FAM13AO94988 1023 aa6.64□□□□□ -1.35
SMG8-205ENST00000580798 SSFA2P28290 1259 aa6.64□□□□□ -1.35
SMG8-205ENST00000580798 TTLL4Q14679 1199 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms