RNA–Protein interactions for RNA: ENST00000580054.1

SMARCD2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5

Gene SMARCD2, Length 477 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-208ENST00000580054 IQSEC3Q9UPP2 1182 aaPredicted RBP11.83□□□□□ -0.52
SMARCD2-208ENST00000580054 MYH13Q9UKX3 1938 aa11.83□□□□□ -0.52
SMARCD2-208ENST00000580054 VCANP13611 3396 aa11.83□□□□□ -0.52
SMARCD2-208ENST00000580054 INHAP05111 366 aa11.82□□□□□ -0.52
SMARCD2-208ENST00000580054 CYP2C8P10632 490 aa11.82□□□□□ -0.52
SMARCD2-208ENST00000580054 BCRP11274 1271 aa11.82□□□□□ -0.52
SMARCD2-208ENST00000580054 FCGRTP55899 365 aa11.82□□□□□ -0.52
SMARCD2-208ENST00000580054 PPATQ06203 517 aa11.82□□□□□ -0.52
SMARCD2-208ENST00000580054 MIGA2Q7L4E1 593 aa11.82□□□□□ -0.52
SMARCD2-208ENST00000580054 C7orf61Q8IZ16 206 aa11.82□□□□□ -0.52
SMARCD2-208ENST00000580054 FAM84BQ96KN1 310 aaPredicted RBP11.82□□□□□ -0.52
SMARCD2-208ENST00000580054 DEFB118Q96PH6 123 aa11.82□□□□□ -0.52
SMARCD2-208ENST00000580054 GDF15Q99988 308 aa11.82□□□□□ -0.52
SMARCD2-208ENST00000580054 MYH16Q9H6N6 1097 aa11.82□□□□□ -0.52
SMARCD2-208ENST00000580054 STXBP5LQ9Y2K9 1186 aa11.82□□□□□ -0.52
SMARCD2-208ENST00000580054 DOCK2Q92608 1830 aa11.81□□□□□ -0.52
SMARCD2-208ENST00000580054 RPAP1Q9BWH6 1393 aaPredicted RBP11.81□□□□□ -0.52
SMARCD2-208ENST00000580054 ADCY3O60266 1144 aa11.81□□□□□ -0.52
SMARCD2-208ENST00000580054 SLC4A2P04920 1241 aa11.81□□□□□ -0.52
SMARCD2-208ENST00000580054 HIBADHP31937 336 aaKnown RBP11.81□□□□□ -0.52
SMARCD2-208ENST00000580054 FLIIQ13045 1269 aa11.81□□□□□ -0.52
SMARCD2-208ENST00000580054 CHAF1AQ13111 956 aaPredicted RBP11.81□□□□□ -0.52
SMARCD2-208ENST00000580054 DNAAF4Q8WXU2 420 aa11.81□□□□□ -0.52
SMARCD2-208ENST00000580054 PAWRQ96IZ0 340 aaKnown RBP11.81□□□□□ -0.52
SMARCD2-208ENST00000580054 CNNM1Q9NRU3 951 aa11.81□□□□□ -0.52
SMARCD2-208ENST00000580054 KCNH4Q9UQ05 1017 aa11.81□□□□□ -0.52
SMARCD2-208ENST00000580054 TFRCP02786 760 aaKnown RBP11.8□□□□□ -0.52
SMARCD2-208ENST00000580054 FLT3LGP49771 235 aa11.8□□□□□ -0.52
SMARCD2-208ENST00000580054 BCAMP50895 628 aa11.8□□□□□ -0.52
SMARCD2-208ENST00000580054 FKBP5Q13451 457 aaPredicted RBP11.8□□□□□ -0.52
SMARCD2-208ENST00000580054 DIEXFQ68CQ4 756 aaKnown RBP11.8□□□□□ -0.52
SMARCD2-208ENST00000580054 GPAT2Q6NUI2 795 aa11.8□□□□□ -0.52
SMARCD2-208ENST00000580054 LMBR1LQ6UX01 489 aa11.8□□□□□ -0.52
SMARCD2-208ENST00000580054 LDHAL6AQ6ZMR3 332 aa11.8□□□□□ -0.52
SMARCD2-208ENST00000580054 LINS1Q8NG48 757 aa11.8□□□□□ -0.52
SMARCD2-208ENST00000580054 PARK7Q99497 189 aaKnown RBP11.8□□□□□ -0.52
SMARCD2-208ENST00000580054 ZNF341Q9BYN7 854 aa11.8□□□□□ -0.52
SMARCD2-208ENST00000580054 PRKRIP1Q9H875 184 aaPredicted RBP11.8□□□□□ -0.52
SMARCD2-208ENST00000580054 MTMR10Q9NXD2 777 aa11.8□□□□□ -0.52
SMARCD2-208ENST00000580054 PHIPQ8WWQ0 1821 aa11.8□□□□□ -0.52
SMARCD2-208ENST00000580054 EYSQ5T1H1 3165 aa11.79□□□□□ -0.52
SMARCD2-208ENST00000580054 SYN1P17600 705 aa11.79□□□□□ -0.52
SMARCD2-208ENST00000580054 BMP8BP34820 402 aa11.79□□□□□ -0.52
SMARCD2-208ENST00000580054 TWISTNBQ3B726 338 aaPredicted RBP11.79□□□□□ -0.52
SMARCD2-208ENST00000580054 TAF7LQ5H9L4 462 aa11.79□□□□□ -0.52
SMARCD2-208ENST00000580054 DCAF15Q66K64 600 aa11.79□□□□□ -0.52
SMARCD2-208ENST00000580054 APOBEC3HQ6NTF7 200 aaKnown RBP11.79□□□□□ -0.52
SMARCD2-208ENST00000580054 GPR153Q6NV75 609 aa11.79□□□□□ -0.52
SMARCD2-208ENST00000580054 FAM83AQ86UY5 434 aa11.79□□□□□ -0.52
SMARCD2-208ENST00000580054 TEKT1Q969V4 418 aa11.79□□□□□ -0.52
SMARCD2-208ENST00000580054 CHMP4AQ9BY43 222 aa11.79□□□□□ -0.52
SMARCD2-208ENST00000580054 PUS3Q9BZE2 481 aaKnown RBP11.79□□□□□ -0.52
SMARCD2-208ENST00000580054 CRISPLD2Q9H0B8 497 aa11.79□□□□□ -0.52
SMARCD2-208ENST00000580054 PAK6Q9NQU5 681 aaPredicted RBP11.79□□□□□ -0.52
SMARCD2-208ENST00000580054 TMOD2Q9NZR1 351 aa11.79□□□□□ -0.52
SMARCD2-208ENST00000580054 HDLBPQ00341 1268 aaKnown RBP11.78□□□□□ -0.52
SMARCD2-208ENST00000580054 UBE4AQ14139 1066 aa11.78□□□□□ -0.52
SMARCD2-208ENST00000580054 CCDC57Q2TAC2 916 aa11.78□□□□□ -0.52
SMARCD2-208ENST00000580054 ZDHHC15Q96MV8 337 aa11.78□□□□□ -0.52
SMARCD2-208ENST00000580054 TAOK2Q9UL54 1235 aa11.78□□□□□ -0.52
SMARCD2-208ENST00000580054 DOCK1Q14185 1865 aa11.78□□□□□ -0.52
SMARCD2-208ENST00000580054 LAMA2P24043 3122 aaKnown RBP11.77□□□□□ -0.53
SMARCD2-208ENST00000580054 F6X3S4 739 aa11.77□□□□□ -0.53
SMARCD2-208ENST00000580054 MAGEA10P43363 369 aaPredicted RBP11.77□□□□□ -0.53
SMARCD2-208ENST00000580054 LRIT3Q3SXY7 679 aa11.77□□□□□ -0.53
SMARCD2-208ENST00000580054 NECAB2Q7Z6G3 386 aa11.77□□□□□ -0.53
SMARCD2-208ENST00000580054 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.77□□□□□ -0.53
SMARCD2-208ENST00000580054 HOOK2Q96ED9 719 aa11.77□□□□□ -0.53
SMARCD2-208ENST00000580054 ZNF112Q9UJU3 913 aa11.77□□□□□ -0.53
SMARCD2-208ENST00000580054 SPTBN5Q9NRC6 3674 aaKnown RBP11.77□□□□□ -0.53
SMARCD2-208ENST00000580054 PLXNB2O15031 1838 aa11.76□□□□□ -0.53
SMARCD2-208ENST00000580054 TNPO2O14787 897 aaKnown RBP11.76□□□□□ -0.53
SMARCD2-208ENST00000580054 TCP10Q12799 353 aa11.76□□□□□ -0.53
SMARCD2-208ENST00000580054 IRF5Q13568 498 aa11.76□□□□□ -0.53
SMARCD2-208ENST00000580054 NOL9Q5SY16 702 aaKnown RBP11.76□□□□□ -0.53
SMARCD2-208ENST00000580054 FKBP1CQ5VVH2 108 aa11.76□□□□□ -0.53
SMARCD2-208ENST00000580054 FBXO33Q7Z6M2 555 aa11.76□□□□□ -0.53
SMARCD2-208ENST00000580054 TDHQ8IZJ6 230 aa11.76□□□□□ -0.53
SMARCD2-208ENST00000580054 PXYLP1Q8TE99 480 aa11.76□□□□□ -0.53
SMARCD2-208ENST00000580054 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.76□□□□□ -0.53
SMARCD2-208ENST00000580054 PRUNE2Q8WUY3 3088 aa11.75□□□□□ -0.53
SMARCD2-208ENST00000580054 NFIAQ12857 509 aa11.75□□□□□ -0.53
SMARCD2-208ENST00000580054 BEND3Q5T5X7 828 aa11.75□□□□□ -0.53
SMARCD2-208ENST00000580054 VPS37DQ86XT2 251 aa11.75□□□□□ -0.53
SMARCD2-208ENST00000580054 TBC1D22AQ8WUA7 517 aa11.75□□□□□ -0.53
SMARCD2-208ENST00000580054 TTC28Q96AY4 2481 aa11.75□□□□□ -0.53
SMARCD2-208ENST00000580054 A0A0G2JLL6 359 aaPredicted RBP11.74□□□□□ -0.53
SMARCD2-208ENST00000580054 GRM8O00222 908 aa11.74□□□□□ -0.53
SMARCD2-208ENST00000580054 ANP32CO43423 234 aa11.74□□□□□ -0.53
SMARCD2-208ENST00000580054 FRAT2O75474 233 aaPredicted RBP11.74□□□□□ -0.53
SMARCD2-208ENST00000580054 TRIM32Q13049 653 aa11.74□□□□□ -0.53
SMARCD2-208ENST00000580054 GADL1Q6ZQY3 521 aa11.74□□□□□ -0.53
SMARCD2-208ENST00000580054 PRRT2Q7Z6L0 340 aaPredicted RBP11.74□□□□□ -0.53
SMARCD2-208ENST00000580054 FAM151AQ8WW52 585 aa11.74□□□□□ -0.53
SMARCD2-208ENST00000580054 GUCD1Q96NT3 240 aa11.74□□□□□ -0.53
SMARCD2-208ENST00000580054 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.74□□□□□ -0.53
SMARCD2-208ENST00000580054 RPTORQ8N122 1335 aa11.74□□□□□ -0.53
SMARCD2-208ENST00000580054 ATRNL1Q5VV63 1379 aa11.74□□□□□ -0.53
SMARCD2-208ENST00000580054 LOC285556D6RIA3 1793 aa11.74□□□□□ -0.53
SMARCD2-208ENST00000580054 CXCL11O14625 94 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms