RNA–Protein interactions for RNA: ENST00000579969.1

SNORD53-201, Transcript of small nucleolar RNA, C/D box 53, humanhuman

BASIC

Gene SNORD53, Length 78 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD53-201ENST00000579969 ATN1P54259 1190 aaPredicted RBP3.17□□□□□ -1.9
SNORD53-201ENST00000579969 EIF4G2P78344 907 aaKnown RBP eCLIP3.17□□□□□ -1.9
SNORD53-201ENST00000579969 TFF2Q03403 129 aa3.17□□□□□ -1.9
SNORD53-201ENST00000579969 TRIM28Q13263 835 aaKnown RBP3.17□□□□□ -1.9
SNORD53-201ENST00000579969 MOGSQ13724 837 aa3.17□□□□□ -1.9
SNORD53-201ENST00000579969 SPDYE2Q495Y8 402 aa3.17□□□□□ -1.9
SNORD53-201ENST00000579969 CCDC152Q4G0S7 254 aa3.17□□□□□ -1.9
SNORD53-201ENST00000579969 GPAT2Q6NUI2 795 aa3.17□□□□□ -1.9
SNORD53-201ENST00000579969 ANKRD18AQ8IVF6 992 aa3.17□□□□□ -1.9
SNORD53-201ENST00000579969 CERS5Q8N5B7 392 aa3.17□□□□□ -1.9
SNORD53-201ENST00000579969 BADQ92934 168 aa3.17□□□□□ -1.9
SNORD53-201ENST00000579969 KHSRPQ92945 711 aaKnown RBP eCLIP3.17□□□□□ -1.9
SNORD53-201ENST00000579969 FBXL18Q96ME1 805 aa3.17□□□□□ -1.9
SNORD53-201ENST00000579969 CCDC85AQ96PX6 553 aaPredicted RBP3.17□□□□□ -1.9
SNORD53-201ENST00000579969 UIMC1Q96RL1 719 aa3.17□□□□□ -1.9
SNORD53-201ENST00000579969 WRNIP1Q96S55 665 aa3.17□□□□□ -1.9
SNORD53-201ENST00000579969 ANP32EQ9BTT0 268 aa3.17□□□□□ -1.9
SNORD53-201ENST00000579969 ISCA1Q9BUE6 129 aa3.17□□□□□ -1.9
SNORD53-201ENST00000579969 SENP6Q9GZR1 1112 aaPredicted RBP3.17□□□□□ -1.9
SNORD53-201ENST00000579969 TMEM39BQ9GZU3 492 aa3.17□□□□□ -1.9
SNORD53-201ENST00000579969 PRDM12Q9H4Q4 367 aa3.17□□□□□ -1.9
SNORD53-201ENST00000579969 TDRD3Q9H7E2 651 aaKnown RBP3.17□□□□□ -1.9
SNORD53-201ENST00000579969 CXXC1Q9P0U4 656 aaPredicted RBP3.17□□□□□ -1.9
SNORD53-201ENST00000579969 GJD2Q9UKL4 321 aa3.17□□□□□ -1.9
SNORD53-201ENST00000579969 MINPP1Q9UNW1 487 aa3.17□□□□□ -1.9
SNORD53-201ENST00000579969 LEMD3Q9Y2U8 911 aa3.17□□□□□ -1.9
SNORD53-201ENST00000579969 SIPA1L3O60292 1781 aaPredicted RBP3.17□□□□□ -1.9
SNORD53-201ENST00000579969 MED23Q9ULK4 1368 aa3.16□□□□□ -1.9
SNORD53-201ENST00000579969 PRR33A8MZF0 331 aa3.16□□□□□ -1.9
SNORD53-201ENST00000579969 TLL1O43897 1013 aa3.16□□□□□ -1.9
SNORD53-201ENST00000579969 CYP2B6P20813 491 aa3.16□□□□□ -1.9
SNORD53-201ENST00000579969 DNAJB2P25686 324 aa3.16□□□□□ -1.9
SNORD53-201ENST00000579969 INPP5BP32019 993 aa3.16□□□□□ -1.9
SNORD53-201ENST00000579969 KCNQ1P51787 676 aa3.16□□□□□ -1.9
SNORD53-201ENST00000579969 RTP1P59025 263 aa3.16□□□□□ -1.9
SNORD53-201ENST00000579969 ADGRE1Q14246 886 aa3.16□□□□□ -1.9
SNORD53-201ENST00000579969 LHX8Q68G74 356 aa3.16□□□□□ -1.9
SNORD53-201ENST00000579969 MIGA2Q7L4E1 593 aa3.16□□□□□ -1.9
SNORD53-201ENST00000579969 FASTKD5Q7L8L6 764 aaKnown RBP3.16□□□□□ -1.9
SNORD53-201ENST00000579969 DZIP1LQ8IYY4 767 aaKnown RBP3.16□□□□□ -1.9
SNORD53-201ENST00000579969 JARID2Q92833 1246 aaPredicted RBP3.16□□□□□ -1.9
SNORD53-201ENST00000579969 TIFAQ96CG3 184 aa3.16□□□□□ -1.9
SNORD53-201ENST00000579969 PKNOX2Q96KN3 472 aa3.16□□□□□ -1.9
SNORD53-201ENST00000579969 RNPC3Q96LT9 517 aaKnown RBP3.16□□□□□ -1.9
SNORD53-201ENST00000579969 RSPH6AQ9H0K4 717 aa3.16□□□□□ -1.9
SNORD53-201ENST00000579969 KCNH6Q9H252 994 aa3.16□□□□□ -1.9
SNORD53-201ENST00000579969 CD209Q9NNX6 404 aa3.16□□□□□ -1.9
SNORD53-201ENST00000579969 BSDC1Q9NW68 430 aaPredicted RBP3.16□□□□□ -1.9
SNORD53-201ENST00000579969 SPTBN4Q9H254 2564 aa3.16□□□□□ -1.9
SNORD53-201ENST00000579969 CHD8Q9HCK8 2581 aa3.16□□□□□ -1.9
SNORD53-201ENST00000579969 LRRC37AA6NMS7 1700 aa3.16□□□□□ -1.9
SNORD53-201ENST00000579969 DDX60Q8IY21 1712 aaKnown RBP3.16□□□□□ -1.9
SNORD53-201ENST00000579969 LAMB1P07942 1786 aa3.15□□□□□ -1.9
SNORD53-201ENST00000579969 LAMB2P55268 1798 aa3.15□□□□□ -1.9
SNORD53-201ENST00000579969 DNAH12Q6ZR08 3092 aa3.15□□□□□ -1.9
SNORD53-201ENST00000579969 PSME4Q14997 1843 aa3.15□□□□□ -1.91
SNORD53-201ENST00000579969 ERC2O15083 957 aa3.15□□□□□ -1.91
SNORD53-201ENST00000579969 PDE8AO60658 829 aa3.15□□□□□ -1.91
SNORD53-201ENST00000579969 PDIA4P13667 645 aaKnown RBP3.15□□□□□ -1.91
SNORD53-201ENST00000579969 PRKAR2AP13861 404 aaKnown RBP3.15□□□□□ -1.91
SNORD53-201ENST00000579969 KLRK1P26718 216 aa3.15□□□□□ -1.91
SNORD53-201ENST00000579969 EPHB4P54760 987 aa3.15□□□□□ -1.91
SNORD53-201ENST00000579969 FKBP1AP62942 108 aaKnown RBP3.15□□□□□ -1.91
SNORD53-201ENST00000579969 CACNB2Q08289 660 aaPredicted RBP3.15□□□□□ -1.91
SNORD53-201ENST00000579969 SKIV2LQ15477 1246 aaKnown RBP3.15□□□□□ -1.91
SNORD53-201ENST00000579969 GLIPR1L2Q4G1C9 344 aa3.15□□□□□ -1.91
SNORD53-201ENST00000579969 MAP3K21Q5TCX8 1036 aa3.15□□□□□ -1.91
SNORD53-201ENST00000579969 DCAF15Q66K64 600 aa3.15□□□□□ -1.91
SNORD53-201ENST00000579969 SLC39A5Q6ZMH5 540 aa3.15□□□□□ -1.91
SNORD53-201ENST00000579969 CCDC129Q6ZRS4 1044 aa3.15□□□□□ -1.91
SNORD53-201ENST00000579969 SH3RF1Q7Z6J0 888 aa3.15□□□□□ -1.91
SNORD53-201ENST00000579969 ANKRD13CQ8N6S4 541 aa3.15□□□□□ -1.91
SNORD53-201ENST00000579969 PLBD2Q8NHP8 589 aa3.15□□□□□ -1.91
SNORD53-201ENST00000579969 SMCR8Q8TEV9 937 aaPredicted RBP3.15□□□□□ -1.91
SNORD53-201ENST00000579969 HERVK_113Q902F9 699 aa3.15□□□□□ -1.91
SNORD53-201ENST00000579969 HOOK2Q96ED9 719 aa3.15□□□□□ -1.91
SNORD53-201ENST00000579969 PHOX2BQ99453 314 aa3.15□□□□□ -1.91
SNORD53-201ENST00000579969 CDC5LQ99459 802 aaKnown RBP3.15□□□□□ -1.91
SNORD53-201ENST00000579969 ZNF341Q9BYN7 854 aa3.15□□□□□ -1.91
SNORD53-201ENST00000579969 ANKRD2Q9GZV1 360 aa3.15□□□□□ -1.91
SNORD53-201ENST00000579969 PRDM5Q9NQX1 630 aaPredicted RBP3.15□□□□□ -1.91
SNORD53-201ENST00000579969 TTF2Q9UNY4 1162 aaKnown RBP3.15□□□□□ -1.91
SNORD53-201ENST00000579969 JAG2Q9Y219 1238 aa3.15□□□□□ -1.91
SNORD53-201ENST00000579969 ATP11BQ9Y2G3 1177 aa3.15□□□□□ -1.91
SNORD53-201ENST00000579969 ZHX2Q9Y6X8 837 aa3.15□□□□□ -1.91
SNORD53-201ENST00000579969 PKD1L2Q7Z442 2459 aa3.15□□□□□ -1.91
SNORD53-201ENST00000579969 COL3A1P02461 1466 aaPredicted RBP3.15□□□□□ -1.91
SNORD53-201ENST00000579969 TPRP12270 2363 aaKnown RBP3.15□□□□□ -1.91
SNORD53-201ENST00000579969 COL4A1P02462 1669 aa3.14□□□□□ -1.91
SNORD53-201ENST00000579969 XIRP2A4UGR9 3374 aa3.14□□□□□ -1.91
SNORD53-201ENST00000579969 RIF1Q5UIP0 2472 aaKnown RBP3.14□□□□□ -1.91
SNORD53-201ENST00000579969 MGAMO43451 1857 aa3.14□□□□□ -1.91
SNORD53-201ENST00000579969 TRIM43BA6NCK2 446 aa3.14□□□□□ -1.91
SNORD53-201ENST00000579969 GRXCR1A8MXD5 290 aa3.14□□□□□ -1.91
SNORD53-201ENST00000579969 KRT37O76014 449 aa3.14□□□□□ -1.91
SNORD53-201ENST00000579969 XRCC5P13010 732 aaKnown RBP3.14□□□□□ -1.91
SNORD53-201ENST00000579969 IL1R1P14778 569 aa3.14□□□□□ -1.91
SNORD53-201ENST00000579969 CCND3P30281 292 aaPredicted RBP3.14□□□□□ -1.91
SNORD53-201ENST00000579969 PBX2P40425 430 aa3.14□□□□□ -1.91
SNORD53-201ENST00000579969 KCNJ4P48050 445 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms