RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 PARP3Q9Y6F1 533 aa13.05□□□□□ -0.32
SKA2-204ENST00000578519 SALL1Q9NSC2 1324 aa13.05□□□□□ -0.32
SKA2-204ENST00000578519 AKAP11Q9UKA4 1901 aa13.05□□□□□ -0.32
SKA2-204ENST00000578519 MYH7P12883 1935 aa13.04□□□□□ -0.32
SKA2-204ENST00000578519 KLF18A0A0U1RQI7 1052 aa13.04□□□□□ -0.32
SKA2-204ENST00000578519 CCDC196A0A1B0GTZ2 297 aa13.04□□□□□ -0.32
SKA2-204ENST00000578519 GOLGA6L4A6NEF3 574 aa13.04□□□□□ -0.32
SKA2-204ENST00000578519 CCDC69A6NI79 296 aa13.04□□□□□ -0.32
SKA2-204ENST00000578519 LIFRP42702 1097 aa13.04□□□□□ -0.32
SKA2-204ENST00000578519 SCRN1Q12765 414 aa13.04□□□□□ -0.32
SKA2-204ENST00000578519 PPP2R5BQ15173 497 aa13.04□□□□□ -0.32
SKA2-204ENST00000578519 DZIP1Q86YF9 867 aaKnown RBP13.04□□□□□ -0.32
SKA2-204ENST00000578519 TBC1D22AQ8WUA7 517 aa13.04□□□□□ -0.32
SKA2-204ENST00000578519 WASF1Q92558 559 aa13.04□□□□□ -0.32
SKA2-204ENST00000578519 ESR2Q92731 530 aa13.04□□□□□ -0.32
SKA2-204ENST00000578519 ZNF396Q96N95 335 aaPredicted RBP13.04□□□□□ -0.32
SKA2-204ENST00000578519 LRRC2Q9BYS8 371 aa13.04□□□□□ -0.32
SKA2-204ENST00000578519 ATP8A2Q9NTI2 1148 aa13.04□□□□□ -0.32
SKA2-204ENST00000578519 ANAPC4Q9UJX5 808 aa13.04□□□□□ -0.32
SKA2-204ENST00000578519 PTPDC1A2A3K4 754 aa13.03□□□□□ -0.32
SKA2-204ENST00000578519 KLRG2A4D1S0 409 aaPredicted RBP13.03□□□□□ -0.32
SKA2-204ENST00000578519 POLRMTO00411 1230 aaKnown RBP13.03□□□□□ -0.32
SKA2-204ENST00000578519 FOXP2O15409 715 aa13.03□□□□□ -0.32
SKA2-204ENST00000578519 LDHBP07195 334 aaKnown RBP13.03□□□□□ -0.32
SKA2-204ENST00000578519 RCAN1P53805 252 aa13.03□□□□□ -0.32
SKA2-204ENST00000578519 ZNF445P59923 1031 aa13.03□□□□□ -0.32
SKA2-204ENST00000578519 CHAF1AQ13111 956 aaPredicted RBP13.03□□□□□ -0.32
SKA2-204ENST00000578519 CCDC178Q5BJE1 867 aa13.03□□□□□ -0.32
SKA2-204ENST00000578519 TMEM67Q5HYA8 995 aa13.03□□□□□ -0.32
SKA2-204ENST00000578519 USP48Q86UV5 1035 aa13.03□□□□□ -0.32
SKA2-204ENST00000578519 SP8Q8IXZ3 490 aa13.03□□□□□ -0.32
SKA2-204ENST00000578519 LCORLQ8N3X6 602 aa13.03□□□□□ -0.32
SKA2-204ENST00000578519 TDRD7Q8NHU6 1098 aaKnown RBP13.03□□□□□ -0.32
SKA2-204ENST00000578519 TOMM22Q9NS69 142 aa13.03□□□□□ -0.32
SKA2-204ENST00000578519 PODXL2Q9NZ53 605 aa13.03□□□□□ -0.32
SKA2-204ENST00000578519 IQSEC3Q9UPP2 1182 aaPredicted RBP13.03□□□□□ -0.32
SKA2-204ENST00000578519 FSD2A1L4K1 749 aa13.02□□□□□ -0.33
SKA2-204ENST00000578519 GOLGA8BA8MQT2 603 aa13.02□□□□□ -0.33
SKA2-204ENST00000578519 SH2B2O14492 632 aaPredicted RBP13.02□□□□□ -0.33
SKA2-204ENST00000578519 IFIT3O14879 490 aaKnown RBP13.02□□□□□ -0.33
SKA2-204ENST00000578519 NPR1P16066 1061 aa13.02□□□□□ -0.33
SKA2-204ENST00000578519 PLCG2P16885 1265 aa13.02□□□□□ -0.33
SKA2-204ENST00000578519 CCT2P78371 535 aaKnown RBP13.02□□□□□ -0.33
SKA2-204ENST00000578519 PPARAQ07869 468 aa13.02□□□□□ -0.33
SKA2-204ENST00000578519 ST3GAL1Q11201 340 aa13.02□□□□□ -0.33
SKA2-204ENST00000578519 CAVIN1Q6NZI2 390 aaKnown RBP13.02□□□□□ -0.33
SKA2-204ENST00000578519 CCDC24Q8N4L8 307 aa13.02□□□□□ -0.33
SKA2-204ENST00000578519 NSUN7Q8NE18 718 aaKnown RBP13.02□□□□□ -0.33
SKA2-204ENST00000578519 NSUN4Q96CB9 384 aaKnown RBP13.02□□□□□ -0.33
SKA2-204ENST00000578519 NSFL1CQ9UNZ2 370 aaKnown RBP13.02□□□□□ -0.33
SKA2-204ENST00000578519 ZBTB43O43298 467 aa13.01□□□□□ -0.33
SKA2-204ENST00000578519 METAP2P50579 478 aaKnown RBP eCLIP13.01□□□□□ -0.33
SKA2-204ENST00000578519 WTAPQ15007 396 aa13.01□□□□□ -0.33
SKA2-204ENST00000578519 SGMS1Q86VZ5 419 aa13.01□□□□□ -0.33
SKA2-204ENST00000578519 AMIGO3Q86WK7 504 aa13.01□□□□□ -0.33
SKA2-204ENST00000578519 MIGA1Q8NAN2 632 aa13.01□□□□□ -0.33
SKA2-204ENST00000578519 UBAC1Q9BSL1 405 aa13.01□□□□□ -0.33
SKA2-204ENST00000578519 ZNF287Q9HBT7 754 aa13.01□□□□□ -0.33
SKA2-204ENST00000578519 ARPP21Q9UBL0 812 aaPredicted RBP13.01□□□□□ -0.33
SKA2-204ENST00000578519 SLC12A7Q9Y666 1083 aa13.01□□□□□ -0.33
SKA2-204ENST00000578519 ELP1O95163 1332 aa13.01□□□□□ -0.33
SKA2-204ENST00000578519 C4AP0C0L4 1744 aa13□□□□□ -0.33
SKA2-204ENST00000578519 MINDY4BA8MYZ0 360 aa13□□□□□ -0.33
SKA2-204ENST00000578519 B4E1Z4 1266 aa13□□□□□ -0.33
SKA2-204ENST00000578519 UFL1O94874 794 aa13□□□□□ -0.33
SKA2-204ENST00000578519 MECOMQ03112 1051 aa13□□□□□ -0.33
SKA2-204ENST00000578519 PDE4BQ07343 736 aa13□□□□□ -0.33
SKA2-204ENST00000578519 TRIM29Q14134 588 aa13□□□□□ -0.33
SKA2-204ENST00000578519 CHST3Q7LGC8 479 aa13□□□□□ -0.33
SKA2-204ENST00000578519 IQCA1Q86XH1 822 aa13□□□□□ -0.33
SKA2-204ENST00000578519 TBC1D10CQ8IV04 446 aa13□□□□□ -0.33
SKA2-204ENST00000578519 PROM2Q8N271 834 aa13□□□□□ -0.33
SKA2-204ENST00000578519 DDX11Q96FC9 970 aa13□□□□□ -0.33
SKA2-204ENST00000578519 EYA3Q99504 573 aa13□□□□□ -0.33
SKA2-204ENST00000578519 RIOK1Q9BRS2 568 aaKnown RBP13□□□□□ -0.33
SKA2-204ENST00000578519 CNPY2Q9Y2B0 182 aa13□□□□□ -0.33
SKA2-204ENST00000578519 SUGT1Q9Y2Z0 365 aa13□□□□□ -0.33
SKA2-204ENST00000578519 DOCK2Q92608 1830 aa12.99□□□□□ -0.33
SKA2-204ENST00000578519 G3V3G9 751 aa12.99□□□□□ -0.33
SKA2-204ENST00000578519 C6orf229H3BNL8 230 aa12.99□□□□□ -0.33
SKA2-204ENST00000578519 PPEF1O14829 653 aaPredicted RBP12.99□□□□□ -0.33
SKA2-204ENST00000578519 FIBPO43427 364 aa12.99□□□□□ -0.33
SKA2-204ENST00000578519 KDM4AO75164 1064 aa12.99□□□□□ -0.33
SKA2-204ENST00000578519 CALM1P0DP23 149 aa12.99□□□□□ -0.33
SKA2-204ENST00000578519 CALM2P0DP24 149 aa12.99□□□□□ -0.33
SKA2-204ENST00000578519 CALM3P0DP25 149 aa12.99□□□□□ -0.33
SKA2-204ENST00000578519 ANTXR2P58335 489 aa12.99□□□□□ -0.33
SKA2-204ENST00000578519 GPSM2P81274 684 aa12.99□□□□□ -0.33
SKA2-204ENST00000578519 DNM1Q05193 864 aaKnown RBP12.99□□□□□ -0.33
SKA2-204ENST00000578519 SF3B2Q13435 895 aaKnown RBP12.99□□□□□ -0.33
SKA2-204ENST00000578519 SBK1Q52WX2 424 aa12.99□□□□□ -0.33
SKA2-204ENST00000578519 RRP12Q5JTH9 1297 aaKnown RBP12.99□□□□□ -0.33
SKA2-204ENST00000578519 CCDC183Q5T5S1 534 aa12.99□□□□□ -0.33
SKA2-204ENST00000578519 DCAF8Q5TAQ9 597 aa12.99□□□□□ -0.33
SKA2-204ENST00000578519 REM2Q8IYK8 340 aaPredicted RBP12.99□□□□□ -0.33
SKA2-204ENST00000578519 TRIM22Q8IYM9 498 aa12.99□□□□□ -0.33
SKA2-204ENST00000578519 IGDCC4Q8TDY8 1250 aa12.99□□□□□ -0.33
SKA2-204ENST00000578519 MASTLQ96GX5 879 aa12.99□□□□□ -0.33
SKA2-204ENST00000578519 C8orf76Q96K31 380 aa12.99□□□□□ -0.33
SKA2-204ENST00000578519 SPATA32Q96LK8 384 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms