RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 TRIM6-TRIM34B2RNG4 842 aa13.56□□□□□ -0.24
TRAPPC8-204ENST00000578252 CYP2E1P05181 493 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC8-204ENST00000578252 DACT2Q5SW24 774 aa13.56□□□□□ -0.24
TRAPPC8-204ENST00000578252 C9orf131Q5VYM1 1079 aa13.56□□□□□ -0.24
TRAPPC8-204ENST00000578252 CIAPIN1Q6FI81 312 aa13.56□□□□□ -0.24
TRAPPC8-204ENST00000578252 ZSCAN25Q6NSZ9 544 aa13.56□□□□□ -0.24
TRAPPC8-204ENST00000578252 PI16Q6UXB8 463 aa13.56□□□□□ -0.24
TRAPPC8-204ENST00000578252 SKAP1Q86WV1 359 aa13.56□□□□□ -0.24
TRAPPC8-204ENST00000578252 KBTBD3Q8NAB2 608 aa13.56□□□□□ -0.24
TRAPPC8-204ENST00000578252 FBXW7Q969H0 707 aa13.56□□□□□ -0.24
TRAPPC8-204ENST00000578252 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.56□□□□□ -0.24
TRAPPC8-204ENST00000578252 MAST3O60307 1309 aa13.56□□□□□ -0.24
TRAPPC8-204ENST00000578252 GTPBP6O43824 516 aaPredicted RBP13.55□□□□□ -0.24
TRAPPC8-204ENST00000578252 VIL1P09327 827 aaKnown RBP13.55□□□□□ -0.24
TRAPPC8-204ENST00000578252 GSPT1P15170 499 aaKnown RBP13.55□□□□□ -0.24
TRAPPC8-204ENST00000578252 MMP14P50281 582 aa13.55□□□□□ -0.24
TRAPPC8-204ENST00000578252 MAP3K12Q12852 859 aa13.55□□□□□ -0.24
TRAPPC8-204ENST00000578252 MFSD14BQ5SR56 506 aa13.55□□□□□ -0.24
TRAPPC8-204ENST00000578252 RILPL2Q969X0 211 aa13.55□□□□□ -0.24
TRAPPC8-204ENST00000578252 RTN4Q9NQC3 1192 aaKnown RBP13.55□□□□□ -0.24
TRAPPC8-204ENST00000578252 LRP2BPQ9P2M1 347 aa13.55□□□□□ -0.24
TRAPPC8-204ENST00000578252 ABCF2Q9UG63 623 aa13.55□□□□□ -0.24
TRAPPC8-204ENST00000578252 MYO5AQ9Y4I1 1855 aaKnown RBP13.55□□□□□ -0.24
TRAPPC8-204ENST00000578252 HIP1O00291 1037 aa13.54□□□□□ -0.24
TRAPPC8-204ENST00000578252 RAD17O75943 681 aa13.54□□□□□ -0.24
TRAPPC8-204ENST00000578252 MAP4K4O95819 1239 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC8-204ENST00000578252 LDHBP07195 334 aaKnown RBP13.54□□□□□ -0.24
TRAPPC8-204ENST00000578252 ZFYP08048 801 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC8-204ENST00000578252 SDSP20132 328 aa13.54□□□□□ -0.24
TRAPPC8-204ENST00000578252 RPS12P25398 132 aaKnown RBP13.54□□□□□ -0.24
TRAPPC8-204ENST00000578252 CXCL9Q07325 125 aa13.54□□□□□ -0.24
TRAPPC8-204ENST00000578252 ARSIQ5FYB1 569 aa13.54□□□□□ -0.24
TRAPPC8-204ENST00000578252 RSBN1LQ6PCB5 846 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC8-204ENST00000578252 ERICH6Q7L0X2 663 aa13.54□□□□□ -0.24
TRAPPC8-204ENST00000578252 FSD1Q9BTV5 496 aa13.54□□□□□ -0.24
TRAPPC8-204ENST00000578252 PSMD14O00487 310 aa13.53□□□□□ -0.24
TRAPPC8-204ENST00000578252 IDH1O75874 414 aaKnown RBP13.53□□□□□ -0.24
TRAPPC8-204ENST00000578252 GSTO1P78417 241 aa13.53□□□□□ -0.24
TRAPPC8-204ENST00000578252 SLF2Q8IX21 1173 aa13.53□□□□□ -0.24
TRAPPC8-204ENST00000578252 GPC2Q8N158 579 aa13.53□□□□□ -0.24
TRAPPC8-204ENST00000578252 AGBL3Q8NEM8 1001 aa13.53□□□□□ -0.24
TRAPPC8-204ENST00000578252 EDC3Q96F86 508 aaKnown RBP13.53□□□□□ -0.24
TRAPPC8-204ENST00000578252 ANTXR1Q9H6X2 564 aa13.53□□□□□ -0.24
TRAPPC8-204ENST00000578252 PIH1D3Q9NQM4 214 aaKnown RBP13.53□□□□□ -0.24
TRAPPC8-204ENST00000578252 KCNQ5Q9NR82 932 aa13.53□□□□□ -0.24
TRAPPC8-204ENST00000578252 RAI14Q9P0K7 980 aa13.53□□□□□ -0.24
TRAPPC8-204ENST00000578252 JAG2Q9Y219 1238 aa13.53□□□□□ -0.24
TRAPPC8-204ENST00000578252 NDUFB9Q9Y6M9 179 aa13.53□□□□□ -0.24
TRAPPC8-204ENST00000578252 TBC1D9Q6ZT07 1266 aa13.52□□□□□ -0.25
TRAPPC8-204ENST00000578252 DZIP1Q86YF9 867 aaKnown RBP13.52□□□□□ -0.25
TRAPPC8-204ENST00000578252 ZNF541Q9H0D2 1346 aa13.51□□□□□ -0.25
TRAPPC8-204ENST00000578252 LDHCP07864 332 aa13.51□□□□□ -0.25
TRAPPC8-204ENST00000578252 PRDX5P30044 214 aa13.51□□□□□ -0.25
TRAPPC8-204ENST00000578252 HDLBPQ00341 1268 aaKnown RBP13.51□□□□□ -0.25
TRAPPC8-204ENST00000578252 CASC1Q6TDU7 716 aa13.51□□□□□ -0.25
TRAPPC8-204ENST00000578252 CERS5Q8N5B7 392 aa13.51□□□□□ -0.25
TRAPPC8-204ENST00000578252 DPF2Q92785 391 aa13.51□□□□□ -0.25
TRAPPC8-204ENST00000578252 KHSRPQ92945 711 aaKnown RBP eCLIP13.51□□□□□ -0.25
TRAPPC8-204ENST00000578252 MRIQ9BWK5 157 aa13.51□□□□□ -0.25
TRAPPC8-204ENST00000578252 HDAC9Q9UKV0 1011 aa13.51□□□□□ -0.25
TRAPPC8-204ENST00000578252 MYH2Q9UKX2 1941 aa13.51□□□□□ -0.25
TRAPPC8-204ENST00000578252 RNF113AO15541 343 aaKnown RBP13.5□□□□□ -0.25
TRAPPC8-204ENST00000578252 PDE6AP16499 860 aa13.5□□□□□ -0.25
TRAPPC8-204ENST00000578252 ADD2P35612 726 aa13.5□□□□□ -0.25
TRAPPC8-204ENST00000578252 MECOMQ03112 1051 aa13.5□□□□□ -0.25
TRAPPC8-204ENST00000578252 UBE3CQ15386 1083 aa13.5□□□□□ -0.25
TRAPPC8-204ENST00000578252 SLC9C2Q5TAH2 1124 aa13.5□□□□□ -0.25
TRAPPC8-204ENST00000578252 NAA16Q6N069 864 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC8-204ENST00000578252 OGFOD1Q8N543 542 aa13.5□□□□□ -0.25
TRAPPC8-204ENST00000578252 NSUN4Q96CB9 384 aaKnown RBP13.5□□□□□ -0.25
TRAPPC8-204ENST00000578252 GMLQ99445 158 aa13.5□□□□□ -0.25
TRAPPC8-204ENST00000578252 DIAPH3Q9NSV4 1193 aa13.5□□□□□ -0.25
TRAPPC8-204ENST00000578252 TTF2Q9UNY4 1162 aaKnown RBP13.5□□□□□ -0.25
TRAPPC8-204ENST00000578252 GJA3Q9Y6H8 435 aa13.5□□□□□ -0.25
TRAPPC8-204ENST00000578252 CDC45O75419 566 aa13.49□□□□□ -0.25
TRAPPC8-204ENST00000578252 CERS3Q8IU89 383 aa13.49□□□□□ -0.25
TRAPPC8-204ENST00000578252 KIAA0825Q8IV33 1275 aa13.49□□□□□ -0.25
TRAPPC8-204ENST00000578252 MAGEB6Q8N7X4 407 aa13.49□□□□□ -0.25
TRAPPC8-204ENST00000578252 RUFY2Q8WXA3 655 aa13.49□□□□□ -0.25
TRAPPC8-204ENST00000578252 MXD3Q9BW11 206 aa13.49□□□□□ -0.25
TRAPPC8-204ENST00000578252 GPHNQ9NQX3 736 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC8-204ENST00000578252 SERPINA10Q9UK55 444 aa13.49□□□□□ -0.25
TRAPPC8-204ENST00000578252 MROH7-TTC4A0A0A0MT08 1334 aa13.48□□□□□ -0.25
TRAPPC8-204ENST00000578252 EIF5BO60841 1220 aaKnown RBP13.48□□□□□ -0.25
TRAPPC8-204ENST00000578252 USP17L8P0C7I0 530 aa13.48□□□□□ -0.25
TRAPPC8-204ENST00000578252 CYP7A1P22680 504 aa13.48□□□□□ -0.25
TRAPPC8-204ENST00000578252 GMPSP49915 693 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC8-204ENST00000578252 VARS2Q5ST30 1063 aaKnown RBP13.48□□□□□ -0.25
TRAPPC8-204ENST00000578252 HHIPL2Q6UWX4 724 aa13.48□□□□□ -0.25
TRAPPC8-204ENST00000578252 APPBP2Q92624 585 aa13.48□□□□□ -0.25
TRAPPC8-204ENST00000578252 TEKT1Q969V4 418 aa13.48□□□□□ -0.25
TRAPPC8-204ENST00000578252 NOL10Q9BSC4 688 aaKnown RBP13.48□□□□□ -0.25
TRAPPC8-204ENST00000578252 SCN4AP35499 1836 aa13.48□□□□□ -0.25
TRAPPC8-204ENST00000578252 GAKO14976 1311 aa13.47□□□□□ -0.25
TRAPPC8-204ENST00000578252 RAD50Q92878 1312 aa13.47□□□□□ -0.25
TRAPPC8-204ENST00000578252 ZNF532Q9HCE3 1301 aa13.47□□□□□ -0.25
TRAPPC8-204ENST00000578252 TCRBV5S4A2TA0A5A2 114 aa13.47□□□□□ -0.25
TRAPPC8-204ENST00000578252 GLTPD2A6NH11 291 aa13.47□□□□□ -0.25
TRAPPC8-204ENST00000578252 CHMLP26374 656 aa13.47□□□□□ -0.25
TRAPPC8-204ENST00000578252 LMOD1P29536 600 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms