RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 DPF2Q92785 391 aa13.53□□□□□ -0.24
CDK5RAP3-204ENST00000577664 EVI5LQ96CN4 794 aa13.53□□□□□ -0.24
CDK5RAP3-204ENST00000577664 BOLA2Q9H3K6 86 aa13.53□□□□□ -0.24
CDK5RAP3-204ENST00000577664 SUGT1Q9Y2Z0 365 aa13.53□□□□□ -0.24
CDK5RAP3-204ENST00000577664 SHTN1A0MZ66 631 aa13.52□□□□□ -0.25
CDK5RAP3-204ENST00000577664 RIMBP2O15034 1052 aa13.52□□□□□ -0.25
CDK5RAP3-204ENST00000577664 CYP2E1P05181 493 aaPredicted RBP13.52□□□□□ -0.25
CDK5RAP3-204ENST00000577664 TTF1Q15361 905 aaPredicted RBP13.52□□□□□ -0.25
CDK5RAP3-204ENST00000577664 STRIP1Q5VSL9 837 aa13.52□□□□□ -0.25
CDK5RAP3-204ENST00000577664 MRIQ9BWK5 157 aa13.52□□□□□ -0.25
CDK5RAP3-204ENST00000577664 YDJCA8MPS7 323 aa13.51□□□□□ -0.25
CDK5RAP3-204ENST00000577664 ADM5C9JUS6 153 aa13.51□□□□□ -0.25
CDK5RAP3-204ENST00000577664 ECE2O60344 883 aa13.51□□□□□ -0.25
CDK5RAP3-204ENST00000577664 ZAP70P43403 619 aa13.51□□□□□ -0.25
CDK5RAP3-204ENST00000577664 RGS3P49796 1198 aa13.51□□□□□ -0.25
CDK5RAP3-204ENST00000577664 MMP14P50281 582 aa13.51□□□□□ -0.25
CDK5RAP3-204ENST00000577664 TSHZ3Q63HK5 1081 aa13.51□□□□□ -0.25
CDK5RAP3-204ENST00000577664 OTOP1Q7RTM1 612 aa13.51□□□□□ -0.25
CDK5RAP3-204ENST00000577664 MICALL2Q8IY33 904 aa13.51□□□□□ -0.25
CDK5RAP3-204ENST00000577664 TBC1D22AQ8WUA7 517 aa13.51□□□□□ -0.25
CDK5RAP3-204ENST00000577664 PAG1Q9NWQ8 432 aa13.51□□□□□ -0.25
CDK5RAP3-204ENST00000577664 VIL1P09327 827 aaKnown RBP13.5□□□□□ -0.25
CDK5RAP3-204ENST00000577664 SDSP20132 328 aa13.5□□□□□ -0.25
CDK5RAP3-204ENST00000577664 DOK7Q18PE1 504 aa13.5□□□□□ -0.25
CDK5RAP3-204ENST00000577664 TTLL5Q6EMB2 1281 aa13.5□□□□□ -0.25
CDK5RAP3-204ENST00000577664 ZGPATQ8N5A5 531 aaKnown RBP13.5□□□□□ -0.25
CDK5RAP3-204ENST00000577664 KBTBD3Q8NAB2 608 aa13.5□□□□□ -0.25
CDK5RAP3-204ENST00000577664 DCPSQ96C86 337 aaKnown RBP13.5□□□□□ -0.25
CDK5RAP3-204ENST00000577664 VCANP13611 3396 aa13.49□□□□□ -0.25
CDK5RAP3-204ENST00000577664 COL1A1P02452 1464 aaPredicted RBP13.49□□□□□ -0.25
CDK5RAP3-204ENST00000577664 RFX7Q2KHR2 1363 aa13.49□□□□□ -0.25
CDK5RAP3-204ENST00000577664 A0A1W2PPC1 479 aa13.49□□□□□ -0.25
CDK5RAP3-204ENST00000577664 USP17L3A6NCW0 530 aa13.49□□□□□ -0.25
CDK5RAP3-204ENST00000577664 USP17L4A6NCW7 530 aa13.49□□□□□ -0.25
CDK5RAP3-204ENST00000577664 DACT2Q5SW24 774 aa13.49□□□□□ -0.25
CDK5RAP3-204ENST00000577664 PI16Q6UXB8 463 aa13.49□□□□□ -0.25
CDK5RAP3-204ENST00000577664 USP17L1Q7RTZ2 530 aa13.49□□□□□ -0.25
CDK5RAP3-204ENST00000577664 SAMD7Q7Z3H4 446 aa13.49□□□□□ -0.25
CDK5RAP3-204ENST00000577664 FAM163AQ96GL9 167 aaPredicted RBP13.49□□□□□ -0.25
CDK5RAP3-204ENST00000577664 R3HDMLQ9H3Y0 253 aa13.49□□□□□ -0.25
CDK5RAP3-204ENST00000577664 ANTXR1Q9H6X2 564 aa13.49□□□□□ -0.25
CDK5RAP3-204ENST00000577664 DBNDD1Q9H9R9 158 aa13.49□□□□□ -0.25
CDK5RAP3-204ENST00000577664 PTPN22Q9Y2R2 807 aa13.49□□□□□ -0.25
CDK5RAP3-204ENST00000577664 TRIM17Q9Y577 477 aa13.49□□□□□ -0.25
CDK5RAP3-204ENST00000577664 G3V3G9 751 aa13.48□□□□□ -0.25
CDK5RAP3-204ENST00000577664 FRAT2O75474 233 aaPredicted RBP13.48□□□□□ -0.25
CDK5RAP3-204ENST00000577664 RAD17O75943 681 aa13.48□□□□□ -0.25
CDK5RAP3-204ENST00000577664 EGFRP00533 1210 aa13.48□□□□□ -0.25
CDK5RAP3-204ENST00000577664 GTF2IP78347 998 aa13.48□□□□□ -0.25
CDK5RAP3-204ENST00000577664 DCAF8Q5TAQ9 597 aa13.48□□□□□ -0.25
CDK5RAP3-204ENST00000577664 SPTY2D1Q68D10 685 aaPredicted RBP13.48□□□□□ -0.25
CDK5RAP3-204ENST00000577664 GMLQ99445 158 aa13.48□□□□□ -0.25
CDK5RAP3-204ENST00000577664 KCNQ5Q9NR82 932 aa13.48□□□□□ -0.25
CDK5RAP3-204ENST00000577664 PSME4Q14997 1843 aa13.48□□□□□ -0.25
CDK5RAP3-204ENST00000577664 MYO3BQ8WXR4 1341 aa13.47□□□□□ -0.25
CDK5RAP3-204ENST00000577664 GOLIM4O00461 696 aa13.47□□□□□ -0.25
CDK5RAP3-204ENST00000577664 ZFYP08048 801 aaPredicted RBP13.47□□□□□ -0.25
CDK5RAP3-204ENST00000577664 UBE3CQ15386 1083 aa13.47□□□□□ -0.25
CDK5RAP3-204ENST00000577664 LRRFIP1Q32MZ4 808 aaKnown RBP13.47□□□□□ -0.25
CDK5RAP3-204ENST00000577664 AGBL3Q8NEM8 1001 aa13.47□□□□□ -0.25
CDK5RAP3-204ENST00000577664 CDCA5Q96FF9 252 aa13.47□□□□□ -0.25
CDK5RAP3-204ENST00000577664 BCL11AQ9H165 835 aa13.47□□□□□ -0.25
CDK5RAP3-204ENST00000577664 PIH1D3Q9NQM4 214 aaKnown RBP13.47□□□□□ -0.25
CDK5RAP3-204ENST00000577664 SNRKQ9NRH2 765 aa13.47□□□□□ -0.25
CDK5RAP3-204ENST00000577664 IQSEC3Q9UPP2 1182 aaPredicted RBP13.47□□□□□ -0.25
CDK5RAP3-204ENST00000577664 ZNF646O15015 1829 aaPredicted RBP13.47□□□□□ -0.25
CDK5RAP3-204ENST00000577664 SCN9AQ15858 1988 aa13.47□□□□□ -0.25
CDK5RAP3-204ENST00000577664 SPTBN5Q9NRC6 3674 aaKnown RBP13.46□□□□□ -0.25
CDK5RAP3-204ENST00000577664 HIP1O00291 1037 aa13.46□□□□□ -0.25
CDK5RAP3-204ENST00000577664 HDLBPQ00341 1268 aaKnown RBP13.46□□□□□ -0.25
CDK5RAP3-204ENST00000577664 SREBF2Q12772 1141 aa13.46□□□□□ -0.25
CDK5RAP3-204ENST00000577664 MAP3K12Q12852 859 aa13.46□□□□□ -0.25
CDK5RAP3-204ENST00000577664 ZSCAN25Q6NSZ9 544 aa13.46□□□□□ -0.25
CDK5RAP3-204ENST00000577664 SULF1Q8IWU6 871 aa13.46□□□□□ -0.25
CDK5RAP3-204ENST00000577664 CERS5Q8N5B7 392 aa13.46□□□□□ -0.25
CDK5RAP3-204ENST00000577664 EDC3Q96F86 508 aaKnown RBP13.46□□□□□ -0.25
CDK5RAP3-204ENST00000577664 ZNF333Q96JL9 665 aa13.46□□□□□ -0.25
CDK5RAP3-204ENST00000577664 DNAJC2Q99543 621 aaKnown RBP13.46□□□□□ -0.25
CDK5RAP3-204ENST00000577664 TMEM106CQ9BVX2 250 aa13.46□□□□□ -0.25
CDK5RAP3-204ENST00000577664 NDUFB9Q9Y6M9 179 aa13.46□□□□□ -0.25
CDK5RAP3-204ENST00000577664 DOCK2Q92608 1830 aa13.46□□□□□ -0.26
CDK5RAP3-204ENST00000577664 TCRBV5S4A2TA0A5A2 114 aa13.45□□□□□ -0.26
CDK5RAP3-204ENST00000577664 TRIM6-TRIM34B2RNG4 842 aa13.45□□□□□ -0.26
CDK5RAP3-204ENST00000577664 RPS12P25398 132 aaKnown RBP13.45□□□□□ -0.26
CDK5RAP3-204ENST00000577664 ADD2P35612 726 aa13.45□□□□□ -0.26
CDK5RAP3-204ENST00000577664 TBC1D10BQ4KMP7 808 aaPredicted RBP13.45□□□□□ -0.26
CDK5RAP3-204ENST00000577664 MFSD14BQ5SR56 506 aa13.45□□□□□ -0.26
CDK5RAP3-204ENST00000577664 GPR153Q6NV75 609 aa13.45□□□□□ -0.26
CDK5RAP3-204ENST00000577664 RSBN1LQ6PCB5 846 aaPredicted RBP13.45□□□□□ -0.26
CDK5RAP3-204ENST00000577664 TBC1D9Q6ZT07 1266 aa13.45□□□□□ -0.26
CDK5RAP3-204ENST00000577664 ERICH6Q7L0X2 663 aa13.45□□□□□ -0.26
CDK5RAP3-204ENST00000577664 ZNF384Q8TF68 577 aa13.45□□□□□ -0.26
CDK5RAP3-204ENST00000577664 NSUN4Q96CB9 384 aaKnown RBP13.45□□□□□ -0.26
CDK5RAP3-204ENST00000577664 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.45□□□□□ -0.261e-13■■□□□ 12.3
CDK5RAP3-204ENST00000577664 PRDM6Q9NQX0 595 aa13.45□□□□□ -0.26
CDK5RAP3-204ENST00000577664 MYH13Q9UKX3 1938 aa13.45□□□□□ -0.26
CDK5RAP3-204ENST00000577664 PSMD14O00487 310 aa13.44□□□□□ -0.26
CDK5RAP3-204ENST00000577664 SOX1O00570 391 aaPredicted RBP13.44□□□□□ -0.26
CDK5RAP3-204ENST00000577664 RNF113AO15541 343 aaKnown RBP13.44□□□□□ -0.26
CDK5RAP3-204ENST00000577664 ALDH1A1P00352 501 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms