RNA–Protein interactions for RNA: ENST00000576979.1

CTNS-210, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-210ENST00000576979 FBXO11Q86XK2 927 aa7.11□□□□□ -1.27
CTNS-210ENST00000576979 SLC9A9Q8IVB4 645 aa7.11□□□□□ -1.27
CTNS-210ENST00000576979 BANK1Q8NDB2 785 aa7.11□□□□□ -1.27
CTNS-210ENST00000576979 TSR2Q969E8 191 aaKnown RBP7.11□□□□□ -1.27
CTNS-210ENST00000576979 PLEKHF1Q96S99 279 aa7.11□□□□□ -1.27
CTNS-210ENST00000576979 SLKQ9H2G2 1235 aaPredicted RBP7.11□□□□□ -1.27
CTNS-210ENST00000576979 ZNF358Q9NW07 568 aa7.11□□□□□ -1.27
CTNS-210ENST00000576979 DNAJB12Q9NXW2 375 aaKnown RBP7.11□□□□□ -1.27
CTNS-210ENST00000576979 REREQ9P2R6 1566 aa7.11□□□□□ -1.27
CTNS-210ENST00000576979 CD163L1Q9NR16 1453 aa7.11□□□□□ -1.27
CTNS-210ENST00000576979 YEATS2Q9ULM3 1422 aa7.1□□□□□ -1.27
CTNS-210ENST00000576979 IGSF3O75054 1194 aa7.1□□□□□ -1.27
CTNS-210ENST00000576979 EPHA4P54764 986 aa7.1□□□□□ -1.27
CTNS-210ENST00000576979 ZNF428Q96B54 188 aa7.1□□□□□ -1.27
CTNS-210ENST00000576979 PRAM1Q96QH2 718 aa7.1□□□□□ -1.27
CTNS-210ENST00000576979 FAM135BQ49AJ0 1406 aa7.1□□□□□ -1.27
CTNS-210ENST00000576979 FYB1O15117 783 aa7.09□□□□□ -1.27
CTNS-210ENST00000576979 RGS9O75916 674 aaPredicted RBP7.09□□□□□ -1.27
CTNS-210ENST00000576979 ALX3O95076 343 aa7.09□□□□□ -1.27
CTNS-210ENST00000576979 TGFB1P01137 390 aa7.09□□□□□ -1.27
CTNS-210ENST00000576979 TRIM27P14373 513 aa7.09□□□□□ -1.27
CTNS-210ENST00000576979 VAC14Q08AM6 782 aa7.09□□□□□ -1.27
CTNS-210ENST00000576979 MAP7D1Q3KQU3 841 aa7.09□□□□□ -1.27
CTNS-210ENST00000576979 MSL1Q68DK7 614 aa7.09□□□□□ -1.27
CTNS-210ENST00000576979 HSCBQ8IWL3 235 aa7.09□□□□□ -1.27
CTNS-210ENST00000576979 TNS4Q8IZW8 715 aa7.09□□□□□ -1.27
CTNS-210ENST00000576979 SSH1Q8WYL5 1049 aa7.09□□□□□ -1.27
CTNS-210ENST00000576979 CDK19Q9BWU1 502 aa7.09□□□□□ -1.27
CTNS-210ENST00000576979 C22orf23Q9BZE7 217 aa7.09□□□□□ -1.27
CTNS-210ENST00000576979 NOB1Q9ULX3 412 aaKnown RBP7.09□□□□□ -1.27
CTNS-210ENST00000576979 GPC6Q9Y625 555 aaPredicted RBP7.09□□□□□ -1.27
CTNS-210ENST00000576979 ARHGEF40Q8TER5 1519 aa7.09□□□□□ -1.27
CTNS-210ENST00000576979 SPATA31D1Q6ZQQ2 1576 aa7.08□□□□□ -1.28
CTNS-210ENST00000576979 AGLP35573 1532 aa7.08□□□□□ -1.28
CTNS-210ENST00000576979 KIAA1324LA8MWY0 1029 aaPredicted RBP7.08□□□□□ -1.28
CTNS-210ENST00000576979 EIF5BO60841 1220 aaKnown RBP7.08□□□□□ -1.28
CTNS-210ENST00000576979 LMOD3Q0VAK6 560 aa7.08□□□□□ -1.28
CTNS-210ENST00000576979 GRIK5Q16478 980 aa7.08□□□□□ -1.28
CTNS-210ENST00000576979 SMC5Q8IY18 1101 aa7.08□□□□□ -1.28
CTNS-210ENST00000576979 TMEM57Q8N5G2 664 aa7.08□□□□□ -1.28
CTNS-210ENST00000576979 BRPF3Q9ULD4 1205 aa7.08□□□□□ -1.28
CTNS-210ENST00000576979 CDK12Q9NYV4 1490 aaPredicted RBP7.08□□□□□ -1.28
CTNS-210ENST00000576979 PPIP5K1Q6PFW1 1433 aa7.08□□□□□ -1.28
CTNS-210ENST00000576979 PNPLA6Q8IY17 1366 aa7.08□□□□□ -1.28
CTNS-210ENST00000576979 FMN2Q9NZ56 1722 aa7.07□□□□□ -1.28
CTNS-210ENST00000576979 C3P01024 1663 aa7.07□□□□□ -1.28
CTNS-210ENST00000576979 SERTM1A2A2V5 107 aa7.07□□□□□ -1.28
CTNS-210ENST00000576979 PIK3CDO00329 1044 aa7.07□□□□□ -1.28
CTNS-210ENST00000576979 BACH1O14867 736 aa7.07□□□□□ -1.28
CTNS-210ENST00000576979 DEAF1O75398 565 aaPredicted RBP7.07□□□□□ -1.28
CTNS-210ENST00000576979 PRKAR2BP31323 418 aa7.07□□□□□ -1.28
CTNS-210ENST00000576979 GNAI1P63096 354 aa7.07□□□□□ -1.28
CTNS-210ENST00000576979 JAG1P78504 1218 aa7.07□□□□□ -1.28
CTNS-210ENST00000576979 NFE2L2Q16236 605 aa7.07□□□□□ -1.28
CTNS-210ENST00000576979 CHMP5Q9NZZ3 219 aa7.07□□□□□ -1.28
CTNS-210ENST00000576979 HCN4Q9Y3Q4 1203 aa7.07□□□□□ -1.28
CTNS-210ENST00000576979 EDC4Q6P2E9 1401 aaKnown RBP7.07□□□□□ -1.28
CTNS-210ENST00000576979 RIMS2Q9UQ26 1411 aa7.07□□□□□ -1.28
CTNS-210ENST00000576979 NRKQ7Z2Y5 1582 aa7.07□□□□□ -1.28
CTNS-210ENST00000576979 CACNA1FO60840 1977 aa7.06□□□□□ -1.28
CTNS-210ENST00000576979 IGF2-ASQ6U949 168 aa7.06□□□□□ -1.28
CTNS-210ENST00000576979 GCC1Q96CN9 775 aa7.06□□□□□ -1.28
CTNS-210ENST00000576979 SUSD3Q96L08 255 aa7.06□□□□□ -1.28
CTNS-210ENST00000576979 PTCH1Q13635 1447 aa7.06□□□□□ -1.28
CTNS-210ENST00000576979 DIP2BQ9P265 1576 aa7.06□□□□□ -1.28
CTNS-210ENST00000576979 NRXN3Q9Y4C0 1643 aa7.05□□□□□ -1.28
CTNS-210ENST00000576979 A2ML1A8K2U0 1454 aa7.05□□□□□ -1.28
CTNS-210ENST00000576979 CPB1P15086 417 aa7.05□□□□□ -1.28
CTNS-210ENST00000576979 PTMSP20962 102 aa7.05□□□□□ -1.28
CTNS-210ENST00000576979 NUCB1Q02818 461 aa7.05□□□□□ -1.28
CTNS-210ENST00000576979 KCNA1Q09470 495 aa7.05□□□□□ -1.28
CTNS-210ENST00000576979 LCE4AQ5TA78 99 aa7.05□□□□□ -1.28
CTNS-210ENST00000576979 FAM35AQ86V20 835 aa7.05□□□□□ -1.28
CTNS-210ENST00000576979 CHD1LQ86WJ1 897 aa7.05□□□□□ -1.28
CTNS-210ENST00000576979 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.05□□□□□ -1.28
CTNS-210ENST00000576979 DTWD1Q8N5C7 304 aa7.05□□□□□ -1.28
CTNS-210ENST00000576979 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.05□□□□□ -1.28
CTNS-210ENST00000576979 ARHGAP45Q92619 1136 aa7.05□□□□□ -1.28
CTNS-210ENST00000576979 LPIN3Q9BQK8 851 aa7.05□□□□□ -1.28
CTNS-210ENST00000576979 PHACTR1Q9C0D0 580 aa7.05□□□□□ -1.28
CTNS-210ENST00000576979 ANTXR1Q9H6X2 564 aa7.05□□□□□ -1.28
CTNS-210ENST00000576979 ZBTB40Q9NUA8 1239 aa7.05□□□□□ -1.28
CTNS-210ENST00000576979 IFT57Q9NWB7 429 aa7.05□□□□□ -1.28
CTNS-210ENST00000576979 CPS1P31327 1500 aa7.05□□□□□ -1.28
CTNS-210ENST00000576979 AK9Q5TCS8 1911 aa7.05□□□□□ -1.28
CTNS-210ENST00000576979 HSP90AB1P08238 724 aaKnown RBP7.04□□□□□ -1.28
CTNS-210ENST00000576979 MCM4P33991 863 aa7.04□□□□□ -1.28
CTNS-210ENST00000576979 GTF2IP78347 998 aa7.04□□□□□ -1.28
CTNS-210ENST00000576979 FAM43AQ8N2R8 423 aa7.04□□□□□ -1.28
CTNS-210ENST00000576979 CALR3Q96L12 384 aaKnown RBP7.04□□□□□ -1.28
CTNS-210ENST00000576979 API5Q9BZZ5 524 aaKnown RBP7.04□□□□□ -1.28
CTNS-210ENST00000576979 AATKQ6ZMQ8 1374 aa7.04□□□□□ -1.28
CTNS-210ENST00000576979 PIK3R4Q99570 1358 aa7.04□□□□□ -1.28
CTNS-210ENST00000576979 TOPAZ1Q8N9V7 1692 aa7.03□□□□□ -1.28
CTNS-210ENST00000576979 GOLGA6L3A6NEY3 463 aa7.03□□□□□ -1.28
CTNS-210ENST00000576979 HMOX1P09601 288 aa7.03□□□□□ -1.28
CTNS-210ENST00000576979 NFKB1P19838 968 aa7.03□□□□□ -1.28
CTNS-210ENST00000576979 PSME1Q06323 249 aa7.03□□□□□ -1.28
CTNS-210ENST00000576979 BMP2KLQ5H9B9 411 aa7.03□□□□□ -1.28
CTNS-210ENST00000576979 ANKRD45Q5TZF3 282 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms