RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 PRKG1Q13976 671 aa9.64□□□□□ -0.87
CCDC40-215ENST00000576033 SLC4A8Q2Y0W8 1093 aa9.64□□□□□ -0.87
CCDC40-215ENST00000576033 CDC42EP5Q6NZY7 148 aa9.64□□□□□ -0.87
CCDC40-215ENST00000576033 ERICH6Q7L0X2 663 aa9.64□□□□□ -0.87
CCDC40-215ENST00000576033 CHD1LQ86WJ1 897 aa9.64□□□□□ -0.87
CCDC40-215ENST00000576033 MAGEB6Q8N7X4 407 aa9.64□□□□□ -0.87
CCDC40-215ENST00000576033 MIGA1Q8NAN2 632 aa9.64□□□□□ -0.87
CCDC40-215ENST00000576033 MTMR14Q8NCE2 650 aa9.64□□□□□ -0.87
CCDC40-215ENST00000576033 SH3RF3Q8TEJ3 882 aaPredicted RBP9.64□□□□□ -0.87
CCDC40-215ENST00000576033 GCC1Q96CN9 775 aa9.64□□□□□ -0.87
CCDC40-215ENST00000576033 ZDHHC15Q96MV8 337 aa9.64□□□□□ -0.87
CCDC40-215ENST00000576033 HAUS7Q99871 368 aa9.64□□□□□ -0.87
CCDC40-215ENST00000576033 RWDD1Q9H446 243 aaPredicted RBP9.64□□□□□ -0.87
CCDC40-215ENST00000576033 DDX4Q9NQI0 724 aaKnown RBP9.64□□□□□ -0.87
CCDC40-215ENST00000576033 LRP2BPQ9P2M1 347 aa9.64□□□□□ -0.87
CCDC40-215ENST00000576033 BAZ2AQ9UIF9 1905 aaKnown RBP9.64□□□□□ -0.87
CCDC40-215ENST00000576033 MYH1P12882 1939 aa9.63□□□□□ -0.87
CCDC40-215ENST00000576033 CELF2O95319 508 aaKnown RBP9.63□□□□□ -0.87
CCDC40-215ENST00000576033 HSPA6P17066 643 aa9.63□□□□□ -0.87
CCDC40-215ENST00000576033 ATP5JP18859 108 aa9.63□□□□□ -0.87
CCDC40-215ENST00000576033 TCP10Q12799 353 aa9.63□□□□□ -0.87
CCDC40-215ENST00000576033 PICALMQ13492 652 aa9.63□□□□□ -0.87
CCDC40-215ENST00000576033 NBPF12Q5TAG4 269 aaPredicted RBP9.63□□□□□ -0.87
CCDC40-215ENST00000576033 CENPQQ7L2Z9 268 aaPredicted RBP9.63□□□□□ -0.87
CCDC40-215ENST00000576033 DCPSQ96C86 337 aaKnown RBP9.63□□□□□ -0.87
CCDC40-215ENST00000576033 ECHDC1Q9NTX5 307 aa9.63□□□□□ -0.87
CCDC40-215ENST00000576033 PAG1Q9NWQ8 432 aa9.63□□□□□ -0.87
CCDC40-215ENST00000576033 AATFQ9NY61 560 aaKnown RBP eCLIP9.63□□□□□ -0.87
CCDC40-215ENST00000576033 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.63□□□□□ -0.87
CCDC40-215ENST00000576033 FAM198AQ9UFP1 575 aa9.63□□□□□ -0.87
CCDC40-215ENST00000576033 MAST3O60307 1309 aa9.62□□□□□ -0.87
CCDC40-215ENST00000576033 PITPNM2Q9BZ72 1349 aa9.62□□□□□ -0.87
CCDC40-215ENST00000576033 ATAD5Q96QE3 1844 aa9.62□□□□□ -0.87
CCDC40-215ENST00000576033 TCRBV5S4A2TA0A5A2 114 aa9.62□□□□□ -0.87
CCDC40-215ENST00000576033 ZBTB22O15209 634 aa9.62□□□□□ -0.87
CCDC40-215ENST00000576033 WDHD1O75717 1129 aaPredicted RBP9.62□□□□□ -0.87
CCDC40-215ENST00000576033 PDE6AP16499 860 aa9.62□□□□□ -0.87
CCDC40-215ENST00000576033 CYP7A1P22680 504 aa9.62□□□□□ -0.87
CCDC40-215ENST00000576033 APLP1P51693 650 aa9.62□□□□□ -0.87
CCDC40-215ENST00000576033 PDE1AP54750 535 aa9.62□□□□□ -0.87
CCDC40-215ENST00000576033 RHBDL3P58872 404 aa9.62□□□□□ -0.87
CCDC40-215ENST00000576033 RASA3Q14644 834 aa9.62□□□□□ -0.87
CCDC40-215ENST00000576033 NAA16Q6N069 864 aaPredicted RBP9.62□□□□□ -0.87
CCDC40-215ENST00000576033 SH3BP5LQ7L8J4 393 aa9.62□□□□□ -0.87
CCDC40-215ENST00000576033 SULF1Q8IWU6 871 aa9.62□□□□□ -0.87
CCDC40-215ENST00000576033 ZC3H15Q8WU90 426 aaKnown RBP9.62□□□□□ -0.87
CCDC40-215ENST00000576033 TEPSINQ96N21 525 aa9.62□□□□□ -0.87
CCDC40-215ENST00000576033 DEFB129Q9H1M3 183 aa9.62□□□□□ -0.87
CCDC40-215ENST00000576033 USP40Q9NVE5 1235 aa9.62□□□□□ -0.87
CCDC40-215ENST00000576033 MKRN1Q9UHC7 482 aaKnown RBP9.62□□□□□ -0.87
CCDC40-215ENST00000576033 SUGT1Q9Y2Z0 365 aa9.62□□□□□ -0.87
CCDC40-215ENST00000576033 THSD7BQ9C0I4 1608 aa9.62□□□□□ -0.87
CCDC40-215ENST00000576033 LAMB1P07942 1786 aa9.62□□□□□ -0.87
CCDC40-215ENST00000576033 ZNF532Q9HCE3 1301 aa9.61□□□□□ -0.87
CCDC40-215ENST00000576033 FAM196BA6NMK8 535 aa9.61□□□□□ -0.87
CCDC40-215ENST00000576033 SMIM22K7EJ46 135 aa9.61□□□□□ -0.87
CCDC40-215ENST00000576033 GSPT1P15170 499 aaKnown RBP9.61□□□□□ -0.87
CCDC40-215ENST00000576033 HHIPL2Q6UWX4 724 aa9.61□□□□□ -0.87
CCDC40-215ENST00000576033 CDC37L1Q7L3B6 337 aa9.61□□□□□ -0.87
CCDC40-215ENST00000576033 APOBEC3FQ8IUX4 373 aaKnown RBP9.61□□□□□ -0.87
CCDC40-215ENST00000576033 PLEKHM2Q8IWE5 1019 aa9.61□□□□□ -0.87
CCDC40-215ENST00000576033 LCORLQ8N3X6 602 aa9.61□□□□□ -0.87
CCDC40-215ENST00000576033 ZGPATQ8N5A5 531 aaKnown RBP9.61□□□□□ -0.87
CCDC40-215ENST00000576033 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.61□□□□□ -0.87
CCDC40-215ENST00000576033 GPR75-ASB3A0A0A6YYF3 556 aa9.6□□□□□ -0.87
CCDC40-215ENST00000576033 M0R2C6 588 aa9.6□□□□□ -0.87
CCDC40-215ENST00000576033 ADD2P35612 726 aa9.6□□□□□ -0.87
CCDC40-215ENST00000576033 RGS3P49796 1198 aa9.6□□□□□ -0.87
CCDC40-215ENST00000576033 HDLBPQ00341 1268 aaKnown RBP9.6□□□□□ -0.87
CCDC40-215ENST00000576033 GRM1Q13255 1194 aa9.6□□□□□ -0.87
CCDC40-215ENST00000576033 SHROOM1Q2M3G4 852 aaPredicted RBP9.6□□□□□ -0.87
CCDC40-215ENST00000576033 SLC9C2Q5TAH2 1124 aa9.6□□□□□ -0.87
CCDC40-215ENST00000576033 SPTY2D1Q68D10 685 aaPredicted RBP9.6□□□□□ -0.87
CCDC40-215ENST00000576033 SEC62Q99442 399 aaKnown RBP9.6□□□□□ -0.87
CCDC40-215ENST00000576033 ARMT1Q9H993 441 aa9.6□□□□□ -0.87
CCDC40-215ENST00000576033 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.6□□□□□ -0.87
CCDC40-215ENST00000576033 SAP30BPQ9UHR5 308 aaKnown RBP9.6□□□□□ -0.87
CCDC40-215ENST00000576033 ATRNL1Q5VV63 1379 aa9.6□□□□□ -0.87
CCDC40-215ENST00000576033 TTC41PQ6P2S7 1318 aa9.59□□□□□ -0.87
CCDC40-215ENST00000576033 DDTLA6NHG4 134 aaPredicted RBP9.59□□□□□ -0.87
CCDC40-215ENST00000576033 TMEM88BA6NKF7 163 aa9.59□□□□□ -0.87
CCDC40-215ENST00000576033 PRKAB2O43741 272 aa9.59□□□□□ -0.87
CCDC40-215ENST00000576033 MYO1BO43795 1136 aa9.59□□□□□ -0.87
CCDC40-215ENST00000576033 MBD4O95243 580 aa9.59□□□□□ -0.87
CCDC40-215ENST00000576033 CYP4F22Q6NT55 531 aa9.59□□□□□ -0.87
CCDC40-215ENST00000576033 CCDC129Q6ZRS4 1044 aa9.59□□□□□ -0.87
CCDC40-215ENST00000576033 MAPKAPK5Q8IW41 473 aa9.59□□□□□ -0.87
CCDC40-215ENST00000576033 TEX11Q8IYF3 940 aa9.59□□□□□ -0.87
CCDC40-215ENST00000576033 SDR42E1Q8WUS8 393 aa9.59□□□□□ -0.87
CCDC40-215ENST00000576033 GPATCH3Q96I76 525 aa9.59□□□□□ -0.87
CCDC40-215ENST00000576033 CLMNQ96JQ2 1002 aa9.59□□□□□ -0.87
CCDC40-215ENST00000576033 ZIC5Q96T25 663 aa9.59□□□□□ -0.87
CCDC40-215ENST00000576033 RIOK1Q9BRS2 568 aaKnown RBP9.59□□□□□ -0.87
CCDC40-215ENST00000576033 PUS7LQ9H0K6 701 aaKnown RBP9.59□□□□□ -0.87
CCDC40-215ENST00000576033 STAP2Q9UGK3 403 aa9.59□□□□□ -0.87
CCDC40-215ENST00000576033 ABT1Q9ULW3 272 aaKnown RBP9.59□□□□□ -0.87
CCDC40-215ENST00000576033 DOCK1Q14185 1865 aa9.59□□□□□ -0.87
CCDC40-215ENST00000576033 PHIPQ8WWQ0 1821 aa9.59□□□□□ -0.88
CCDC40-215ENST00000576033 FLT1P17948 1338 aa9.58□□□□□ -0.88
CCDC40-215ENST00000576033 UBE2Q2LH0YL09 131 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms