RNA–Protein interactions for RNA: ENST00000574653.1

TOM1L1-218, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1L1, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-218ENST00000574653 SOX9P48436 509 aa7.76□□□□□ -1.17
TOM1L1-218ENST00000574653 GSTM4Q03013 218 aa7.76□□□□□ -1.17
TOM1L1-218ENST00000574653 SEPT6Q14141 434 aa7.76□□□□□ -1.17
TOM1L1-218ENST00000574653 MPRIPQ6WCQ1 1025 aa7.76□□□□□ -1.17
TOM1L1-218ENST00000574653 VPS37DQ86XT2 251 aa7.76□□□□□ -1.17
TOM1L1-218ENST00000574653 SLITRK4Q8IW52 837 aa7.76□□□□□ -1.17
TOM1L1-218ENST00000574653 SVOPQ8N4V2 548 aa7.76□□□□□ -1.17
TOM1L1-218ENST00000574653 EIF4EBP3O60516 100 aaPredicted RBP7.75□□□□□ -1.17
TOM1L1-218ENST00000574653 TRIM37O94972 964 aa7.75□□□□□ -1.17
TOM1L1-218ENST00000574653 ECEL1O95672 775 aa7.75□□□□□ -1.17
TOM1L1-218ENST00000574653 SELPP16109 830 aa7.75□□□□□ -1.17
TOM1L1-218ENST00000574653 PTPN11Q06124 597 aaPredicted RBP7.75□□□□□ -1.17
TOM1L1-218ENST00000574653 FAM117BQ6P1L5 589 aa7.75□□□□□ -1.17
TOM1L1-218ENST00000574653 GALNT11Q8NCW6 608 aa7.75□□□□□ -1.17
TOM1L1-218ENST00000574653 FBXO27Q8NI29 283 aa7.75□□□□□ -1.17
TOM1L1-218ENST00000574653 KLHDC7BQ96G42 594 aa7.75□□□□□ -1.17
TOM1L1-218ENST00000574653 CARD10Q9BWT7 1032 aa7.75□□□□□ -1.17
TOM1L1-218ENST00000574653 GINM1Q9NU53 330 aa7.75□□□□□ -1.17
TOM1L1-218ENST00000574653 DEAF1O75398 565 aaPredicted RBP7.74□□□□□ -1.17
TOM1L1-218ENST00000574653 CTSBP07858 339 aa7.74□□□□□ -1.17
TOM1L1-218ENST00000574653 ARL4DP49703 201 aa7.74□□□□□ -1.17
TOM1L1-218ENST00000574653 APOBRQ0VD83 1088 aa7.74□□□□□ -1.17
TOM1L1-218ENST00000574653 COL9A2Q14055 689 aaPredicted RBP7.74□□□□□ -1.17
TOM1L1-218ENST00000574653 MPP2Q14168 576 aa7.74□□□□□ -1.17
TOM1L1-218ENST00000574653 MAP4K3Q8IVH8 894 aa7.74□□□□□ -1.17
TOM1L1-218ENST00000574653 DMRTC2Q8IXT2 367 aaPredicted RBP7.74□□□□□ -1.17
TOM1L1-218ENST00000574653 KLHL23Q8NBE8 558 aa7.74□□□□□ -1.17
TOM1L1-218ENST00000574653 DHX38Q92620 1227 aaKnown RBP7.74□□□□□ -1.17
TOM1L1-218ENST00000574653 CBX8Q9HC52 389 aa7.74□□□□□ -1.17
TOM1L1-218ENST00000574653 PPP1R1BQ9UD71 204 aaPredicted RBP7.74□□□□□ -1.17
TOM1L1-218ENST00000574653 EFR3BQ9Y2G0 817 aa7.74□□□□□ -1.17
TOM1L1-218ENST00000574653 ADAM11O75078 769 aa7.73□□□□□ -1.17
TOM1L1-218ENST00000574653 CYP11A1P05108 521 aa7.73□□□□□ -1.17
TOM1L1-218ENST00000574653 AMPD1P23109 780 aa7.73□□□□□ -1.17
TOM1L1-218ENST00000574653 NASPP49321 788 aaPredicted RBP7.73□□□□□ -1.17
TOM1L1-218ENST00000574653 POU4F3Q15319 338 aa7.73□□□□□ -1.17
TOM1L1-218ENST00000574653 XP32Q5T750 250 aa7.73□□□□□ -1.17
TOM1L1-218ENST00000574653 JARID2Q92833 1246 aaPredicted RBP7.73□□□□□ -1.17
TOM1L1-218ENST00000574653 NKD1Q969G9 470 aa7.73□□□□□ -1.17
TOM1L1-218ENST00000574653 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.73□□□□□ -1.17
TOM1L1-218ENST00000574653 KRT82Q9NSB4 513 aa7.73□□□□□ -1.17
TOM1L1-218ENST00000574653 LMNB1P20700 586 aa7.72□□□□□ -1.17
TOM1L1-218ENST00000574653 MAOBP27338 520 aa7.72□□□□□ -1.17
TOM1L1-218ENST00000574653 RBL2Q08999 1139 aa7.72□□□□□ -1.17
TOM1L1-218ENST00000574653 FOXD4L6Q3SYB3 417 aaPredicted RBP7.72□□□□□ -1.17
TOM1L1-218ENST00000574653 MAP1SQ66K74 1059 aaPredicted RBP7.72□□□□□ -1.17
TOM1L1-218ENST00000574653 FOXD4L3Q6VB84 417 aaPredicted RBP7.72□□□□□ -1.17
TOM1L1-218ENST00000574653 DTWD1Q8N5C7 304 aa7.72□□□□□ -1.17
TOM1L1-218ENST00000574653 CCDC86Q9H6F5 360 aaKnown RBP7.72□□□□□ -1.17
TOM1L1-218ENST00000574653 TLR3O15455 904 aaKnown RBP7.71□□□□□ -1.18
TOM1L1-218ENST00000574653 GTF2F1P35269 517 aaKnown RBP eCLIP7.71□□□□□ -1.18
TOM1L1-218ENST00000574653 RPL6Q02878 288 aaKnown RBP7.71□□□□□ -1.18
TOM1L1-218ENST00000574653 SEZ6Q53EL9 994 aa7.71□□□□□ -1.18
TOM1L1-218ENST00000574653 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.71□□□□□ -1.18
TOM1L1-218ENST00000574653 REC114Q7Z4M0 266 aa7.71□□□□□ -1.18
TOM1L1-218ENST00000574653 GPBAR1Q8TDU6 330 aa7.71□□□□□ -1.18
TOM1L1-218ENST00000574653 KCNB2Q92953 911 aa7.71□□□□□ -1.18
TOM1L1-218ENST00000574653 TRIM11Q96F44 468 aa7.71□□□□□ -1.18
TOM1L1-218ENST00000574653 CORO1BQ9BR76 489 aa7.71□□□□□ -1.18
TOM1L1-218ENST00000574653 ZC3H12CQ9C0D7 883 aaKnown RBP7.71□□□□□ -1.18
TOM1L1-218ENST00000574653 STRIP2Q9ULQ0 834 aa7.71□□□□□ -1.18
TOM1L1-218ENST00000574653 LOC100289279A0A1B0GTE1 492 aa7.7□□□□□ -1.18
TOM1L1-218ENST00000574653 ZNF862O60290 1169 aa7.7□□□□□ -1.18
TOM1L1-218ENST00000574653 DLGAP3O95886 979 aa7.7□□□□□ -1.18
TOM1L1-218ENST00000574653 LINC00114Q6XXX2 140 aa7.7□□□□□ -1.18
TOM1L1-218ENST00000574653 SCARF2Q96GP6 870 aaPredicted RBP7.7□□□□□ -1.18
TOM1L1-218ENST00000574653 DNAJC2Q99543 621 aaKnown RBP7.7□□□□□ -1.18
TOM1L1-218ENST00000574653 KCNK4Q9NYG8 393 aa7.7□□□□□ -1.18
TOM1L1-218ENST00000574653 DLL1O00548 723 aa7.69□□□□□ -1.18
TOM1L1-218ENST00000574653 DDX3YO15523 660 aaKnown RBP7.69□□□□□ -1.18
TOM1L1-218ENST00000574653 CD68P34810 354 aaPredicted RBP7.69□□□□□ -1.18
TOM1L1-218ENST00000574653 CDK8P49336 464 aa7.69□□□□□ -1.18
TOM1L1-218ENST00000574653 NLRP12P59046 1061 aa7.69□□□□□ -1.18
TOM1L1-218ENST00000574653 CWF19L2Q2TBE0 894 aaKnown RBP7.69□□□□□ -1.18
TOM1L1-218ENST00000574653 REXO1Q8N1G1 1221 aaKnown RBP7.69□□□□□ -1.18
TOM1L1-218ENST00000574653 BRMS1Q9HCU9 246 aa7.69□□□□□ -1.18
TOM1L1-218ENST00000574653 POLR3KQ9Y2Y1 108 aaPredicted RBP7.69□□□□□ -1.18
TOM1L1-218ENST00000574653 A0A0A0MRY4 1105 aa7.68□□□□□ -1.18
TOM1L1-218ENST00000574653 GFRA2O00451 464 aa7.68□□□□□ -1.18
TOM1L1-218ENST00000574653 SNRPNP63162 240 aaKnown RBP7.68□□□□□ -1.18
TOM1L1-218ENST00000574653 KIF4BQ2VIQ3 1234 aa7.68□□□□□ -1.18
TOM1L1-218ENST00000574653 FBXO11Q86XK2 927 aa7.68□□□□□ -1.18
TOM1L1-218ENST00000574653 FMR1NBQ8N0W7 255 aaPredicted RBP7.68□□□□□ -1.18
TOM1L1-218ENST00000574653 WDR89Q96FK6 387 aaPredicted RBP7.68□□□□□ -1.18
TOM1L1-218ENST00000574653 USP26Q9BXU7 913 aa7.68□□□□□ -1.18
TOM1L1-218ENST00000574653 ZNF408Q9H9D4 720 aa7.68□□□□□ -1.18
TOM1L1-218ENST00000574653 PPT2Q9UMR5 302 aa7.68□□□□□ -1.18
TOM1L1-218ENST00000574653 PCDHGC5Q9Y5F6 944 aa7.68□□□□□ -1.18
TOM1L1-218ENST00000574653 STK10O94804 968 aaKnown RBP7.67□□□□□ -1.18
TOM1L1-218ENST00000574653 BPNT1O95861 308 aa7.67□□□□□ -1.18
TOM1L1-218ENST00000574653 INPP5AQ14642 412 aa7.67□□□□□ -1.18
TOM1L1-218ENST00000574653 TRAPPC3LQ5T215 181 aa7.67□□□□□ -1.18
TOM1L1-218ENST00000574653 LRFN4Q6PJG9 635 aa7.67□□□□□ -1.18
TOM1L1-218ENST00000574653 NEDD1Q8NHV4 660 aa7.67□□□□□ -1.18
TOM1L1-218ENST00000574653 UBASH3BQ8TF42 649 aa7.67□□□□□ -1.18
TOM1L1-218ENST00000574653 SHDQ96IW2 340 aa7.67□□□□□ -1.18
TOM1L1-218ENST00000574653 SRRTQ9BXP5 876 aaKnown RBP7.67□□□□□ -1.18
TOM1L1-218ENST00000574653 LNPKQ9C0E8 428 aa7.67□□□□□ -1.18
TOM1L1-218ENST00000574653 EHMT1Q9H9B1 1298 aa7.67□□□□□ -1.18
TOM1L1-218ENST00000574653 RRAGCQ9HB90 399 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms