RNA–Protein interactions for RNA: ENST00000574639.1

TFAP4-204, Transcript of transcription factor AP-4, human

TSL 5

Gene TFAP4, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TFAP4-204	ENST00000574639	TFCP2	Q12800	502 aa		14.01	□□□□□ -0.17
TFAP4-204	ENST00000574639	VGLL4	Q14135	290 aa		14.01	□□□□□ -0.17
TFAP4-204	ENST00000574639	TMEM57	Q8N5G2	664 aa		14.01	□□□□□ -0.17
TFAP4-204	ENST00000574639	FAM198A	Q9UFP1	575 aa		14.01	□□□□□ -0.17
TFAP4-204	ENST00000574639	ZNF112	Q9UJU3	913 aa		14.01	□□□□□ -0.17
TFAP4-204	ENST00000574639	SNCAIP	Q9Y6H5	919 aa		14.01	□□□□□ -0.17
TFAP4-204	ENST00000574639	GAK	O14976	1311 aa		14	□□□□□ -0.17
TFAP4-204	ENST00000574639	RLBP1	P12271	317 aa		14	□□□□□ -0.17
TFAP4-204	ENST00000574639	TNNI2	P48788	182 aa		14	□□□□□ -0.17
TFAP4-204	ENST00000574639	MAP3K10	Q02779	954 aa		14	□□□□□ -0.17
TFAP4-204	ENST00000574639	NFIA	Q12857	509 aa		14	□□□□□ -0.17
TFAP4-204	ENST00000574639	RASGRF1	Q13972	1273 aa		14	□□□□□ -0.17
TFAP4-204	ENST00000574639	POLA2	Q14181	598 aa		14	□□□□□ -0.17
TFAP4-204	ENST00000574639	DIEXF	Q68CQ4	756 aa	Known RBP	14	□□□□□ -0.17
TFAP4-204	ENST00000574639	ZFPM1	Q8IX07	1006 aa		14	□□□□□ -0.17
TFAP4-204	ENST00000574639	FAM151A	Q8WW52	585 aa		14	□□□□□ -0.17
TFAP4-204	ENST00000574639	OPTN	Q96CV9	577 aa		14	□□□□□ -0.17
TFAP4-204	ENST00000574639	XAGE2	Q96GT9	111 aa		14	□□□□□ -0.17
TFAP4-204	ENST00000574639	ELP3	Q9H9T3	547 aa		14	□□□□□ -0.17
TFAP4-204	ENST00000574639	DENND2A	Q9ULE3	1009 aa		14	□□□□□ -0.17
TFAP4-204	ENST00000574639	RBBP6	Q7Z6E9	1792 aa	Known RBP	14	□□□□□ -0.17
TFAP4-204	ENST00000574639	ZSWIM8	A7E2V4	1837 aa		13.99	□□□□□ -0.17
TFAP4-204	ENST00000574639		A0A1B0GUL7	405 aa		13.99	□□□□□ -0.17
TFAP4-204	ENST00000574639	SPDYE5	A6NIY4	337 aa		13.99	□□□□□ -0.17
TFAP4-204	ENST00000574639	ZBTB7B	O15156	539 aa	Predicted RBP	13.99	□□□□□ -0.17
TFAP4-204	ENST00000574639	FKTN	O75072	461 aa		13.99	□□□□□ -0.17
TFAP4-204	ENST00000574639	PKN2	Q16513	984 aa	Known RBP	13.99	□□□□□ -0.17
TFAP4-204	ENST00000574639	SSH3	Q8TE77	659 aa		13.99	□□□□□ -0.17
TFAP4-204	ENST00000574639	BRI3BP	Q8WY22	251 aa		13.99	□□□□□ -0.17
TFAP4-204	ENST00000574639	CLUAP1	Q96AJ1	413 aa		13.99	□□□□□ -0.17
TFAP4-204	ENST00000574639	HPS5	Q9UPZ3	1129 aa		13.99	□□□□□ -0.17
TFAP4-204	ENST00000574639	BRCA2	P51587	3418 aa		13.99	□□□□□ -0.17
TFAP4-204	ENST00000574639	FOCAD	Q5VW36	1801 aa		13.99	□□□□□ -0.17
TFAP4-204	ENST00000574639	GNAI2	P04899	355 aa		13.98	□□□□□ -0.17
TFAP4-204	ENST00000574639	ATP8B2	P98198	1209 aa		13.98	□□□□□ -0.17
TFAP4-204	ENST00000574639	SH3BP5L	Q7L8J4	393 aa		13.98	□□□□□ -0.17
TFAP4-204	ENST00000574639	ZKSCAN4	Q969J2	545 aa	Predicted RBP	13.98	□□□□□ -0.17
TFAP4-204	ENST00000574639	IDI2	Q9BXS1	227 aa		13.98	□□□□□ -0.17
TFAP4-204	ENST00000574639	SIPA1L1	O43166	1804 aa		13.97	□□□□□ -0.17
TFAP4-204	ENST00000574639	LDHB	P07195	334 aa	Known RBP	13.97	□□□□□ -0.17
TFAP4-204	ENST00000574639	CRHR2	Q13324	411 aa		13.97	□□□□□ -0.17
TFAP4-204	ENST00000574639	MOGS	Q13724	837 aa		13.97	□□□□□ -0.17
TFAP4-204	ENST00000574639	ZKSCAN2	Q63HK3	967 aa		13.97	□□□□□ -0.17
TFAP4-204	ENST00000574639	FRAT1	Q92837	279 aa	Predicted RBP	13.97	□□□□□ -0.17
TFAP4-204	ENST00000574639	GNL3L	Q9NVN8	582 aa	Known RBP	13.97	□□□□□ -0.17
TFAP4-204	ENST00000574639	MKI67	P46013	3256 aa	Known RBP	13.96	□□□□□ -0.17
TFAP4-204	ENST00000574639	PHF20L1	A8MW92	1017 aa		13.96	□□□□□ -0.17
TFAP4-204	ENST00000574639	IRF6	O14896	467 aa		13.96	□□□□□ -0.17
TFAP4-204	ENST00000574639	WDHD1	O75717	1129 aa	Predicted RBP	13.96	□□□□□ -0.17
TFAP4-204	ENST00000574639	ARID4A	P29374	1257 aa	Predicted RBP	13.96	□□□□□ -0.17
TFAP4-204	ENST00000574639	RHBDL3	P58872	404 aa		13.96	□□□□□ -0.17
TFAP4-204	ENST00000574639	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.96	□□□□□ -0.17
TFAP4-204	ENST00000574639	FBXO46	Q6PJ61	603 aa	Predicted RBP	13.96	□□□□□ -0.17
TFAP4-204	ENST00000574639	MIGA2	Q7L4E1	593 aa		13.96	□□□□□ -0.17
TFAP4-204	ENST00000574639	FAM43A	Q8N2R8	423 aa		13.96	□□□□□ -0.17
TFAP4-204	ENST00000574639	HMG20B	Q9P0W2	317 aa		13.96	□□□□□ -0.17
TFAP4-204	ENST00000574639	AKAP2	Q9Y2D5	859 aa		13.96	□□□□□ -0.17
TFAP4-204	ENST00000574639	NOP58	Q9Y2X3	529 aa	Known RBP	13.96	□□□□□ -0.17
TFAP4-204	ENST00000574639	MGAM	O43451	1857 aa		13.95	□□□□□ -0.18
TFAP4-204	ENST00000574639	ZBED9	Q6R2W3	1325 aa		13.95	□□□□□ -0.18
TFAP4-204	ENST00000574639	GPR75-ASB3	A0A0A6YYF3	556 aa		13.95	□□□□□ -0.18
TFAP4-204	ENST00000574639	INPP5B	P32019	993 aa		13.95	□□□□□ -0.18
TFAP4-204	ENST00000574639	GTF2A2	P52657	109 aa		13.95	□□□□□ -0.18
TFAP4-204	ENST00000574639	MLLT1	Q03111	559 aa	Predicted RBP	13.95	□□□□□ -0.18
TFAP4-204	ENST00000574639	PI16	Q6UXB8	463 aa		13.95	□□□□□ -0.18
TFAP4-204	ENST00000574639	OTOP1	Q7RTM1	612 aa		13.95	□□□□□ -0.18
TFAP4-204	ENST00000574639	ERO1B	Q86YB8	467 aa		13.95	□□□□□ -0.18
TFAP4-204	ENST00000574639	GPR108	Q9NPR9	543 aa		13.95	□□□□□ -0.18
TFAP4-204	ENST00000574639	DDX4	Q9NQI0	724 aa	Known RBP	13.95	□□□□□ -0.18
TFAP4-204	ENST00000574639	USP40	Q9NVE5	1235 aa		13.95	□□□□□ -0.18
TFAP4-204	ENST00000574639	DOCK1	Q14185	1865 aa		13.95	□□□□□ -0.18
TFAP4-204	ENST00000574639	ATAD5	Q96QE3	1844 aa		13.94	□□□□□ -0.18
TFAP4-204	ENST00000574639	ENTPD3	O75355	529 aa		13.94	□□□□□ -0.18
TFAP4-204	ENST00000574639	SLURP2	P0DP57	97 aa		13.94	□□□□□ -0.18
TFAP4-204	ENST00000574639	MCAM	P43121	646 aa		13.94	□□□□□ -0.18
TFAP4-204	ENST00000574639	TCP10	Q12799	353 aa		13.94	□□□□□ -0.18
TFAP4-204	ENST00000574639	PPIL2	Q13356	520 aa		13.94	□□□□□ -0.18
TFAP4-204	ENST00000574639	NOL9	Q5SY16	702 aa	Known RBP	13.94	□□□□□ -0.18
TFAP4-204	ENST00000574639	NSUN4	Q96CB9	384 aa	Known RBP	13.94	□□□□□ -0.18
TFAP4-204	ENST00000574639	WRNIP1	Q96S55	665 aa		13.94	□□□□□ -0.18
TFAP4-204	ENST00000574639	ZNF341	Q9BYN7	854 aa		13.94	□□□□□ -0.18
TFAP4-204	ENST00000574639	TMOD2	Q9NZR1	351 aa		13.94	□□□□□ -0.18
TFAP4-204	ENST00000574639	KCNH4	Q9UQ05	1017 aa		13.94	□□□□□ -0.18
TFAP4-204	ENST00000574639	PDE4DIP	Q5VU43	2346 aa		13.93	□□□□□ -0.18
TFAP4-204	ENST00000574639	CCL15-CCL14	A0A0B4J2E2	113 aa		13.93	□□□□□ -0.18
TFAP4-204	ENST00000574639	DDTL	A6NHG4	134 aa	Predicted RBP	13.93	□□□□□ -0.18
TFAP4-204	ENST00000574639	BTBD19	C9JJ37	291 aa		13.93	□□□□□ -0.18
TFAP4-204	ENST00000574639	NPM3	O75607	178 aa	Known RBP	13.93	□□□□□ -0.18
TFAP4-204	ENST00000574639	MECOM	Q03112	1051 aa		13.93	□□□□□ -0.18
TFAP4-204	ENST00000574639	PPAT	Q06203	517 aa		13.93	□□□□□ -0.18
TFAP4-204	ENST00000574639	MVP	Q14764	893 aa	Known RBP	13.93	□□□□□ -0.18
TFAP4-204	ENST00000574639	CCL15	Q16663	113 aa		13.93	□□□□□ -0.18
TFAP4-204	ENST00000574639	TBC1D9	Q6ZT07	1266 aa		13.93	□□□□□ -0.18
TFAP4-204	ENST00000574639	ZGPAT	Q8N5A5	531 aa	Known RBP	13.93	□□□□□ -0.18
TFAP4-204	ENST00000574639	HOOK2	Q96ED9	719 aa		13.93	□□□□□ -0.18
TFAP4-204	ENST00000574639	OTUD5	Q96G74	571 aa		13.93	□□□□□ -0.18
TFAP4-204	ENST00000574639	ZCCHC17	Q9NP64	241 aa	Known RBP	13.93	□□□□□ -0.18
TFAP4-204	ENST00000574639	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.93	□□□□□ -0.18
TFAP4-204	ENST00000574639	CSAD	Q9Y600	493 aa		13.93	□□□□□ -0.18
TFAP4-204	ENST00000574639	DOCK3	Q8IZD9	2030 aa		13.93	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms