RNA–Protein interactions for RNA: ENST00000574294.5

TVP23B-207, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5

Gene TVP23B, Length 1,049 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-207ENST00000574294 MYH2Q9UKX2 1941 aa20.31■□□□□ 0.84
TVP23B-207ENST00000574294 IGSF3O75054 1194 aa20.31■□□□□ 0.84
TVP23B-207ENST00000574294 SURF6O75683 361 aaKnown RBP20.31■□□□□ 0.84
TVP23B-207ENST00000574294 OTUD7BQ6GQQ9 843 aa20.31■□□□□ 0.84
TVP23B-207ENST00000574294 FAM151AQ8WW52 585 aa20.31■□□□□ 0.84
TVP23B-207ENST00000574294 ABCF2Q9UG63 623 aa20.31■□□□□ 0.84
TVP23B-207ENST00000574294 FZD1Q9UP38 647 aa20.31■□□□□ 0.84
TVP23B-207ENST00000574294 CSADQ9Y600 493 aa20.31■□□□□ 0.84
TVP23B-207ENST00000574294 CAPN15O75808 1086 aa20.3■□□□□ 0.84
TVP23B-207ENST00000574294 ARID4AP29374 1257 aaPredicted RBP20.3■□□□□ 0.84
TVP23B-207ENST00000574294 CACNB3P54284 484 aa20.3■□□□□ 0.84
TVP23B-207ENST00000574294 MAP3K9P80192 1104 aa20.3■□□□□ 0.84
TVP23B-207ENST00000574294 DIXDC1Q155Q3 683 aa20.3■□□□□ 0.84
TVP23B-207ENST00000574294 CDC42EP5Q6NZY7 148 aa20.3■□□□□ 0.84
TVP23B-207ENST00000574294 SPATA5Q8NB90 893 aa20.3■□□□□ 0.84
TVP23B-207ENST00000574294 ABHD8Q96I13 439 aa20.3■□□□□ 0.84
TVP23B-207ENST00000574294 CLMNQ96JQ2 1002 aa20.3■□□□□ 0.84
TVP23B-207ENST00000574294 MAP4K4O95819 1239 aaPredicted RBP20.29■□□□□ 0.84
TVP23B-207ENST00000574294 GSTO1P78417 241 aa20.29■□□□□ 0.84
TVP23B-207ENST00000574294 MKRN3Q13064 507 aaKnown RBP20.29■□□□□ 0.84
TVP23B-207ENST00000574294 CCDC158Q5M9N0 1113 aa20.29■□□□□ 0.84
TVP23B-207ENST00000574294 ERICH6Q7L0X2 663 aa20.29■□□□□ 0.84
TVP23B-207ENST00000574294 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.29■□□□□ 0.84
TVP23B-207ENST00000574294 USP40Q9NVE5 1235 aa20.29■□□□□ 0.84
TVP23B-207ENST00000574294 RCAN3Q9UKA8 241 aa20.29■□□□□ 0.84
TVP23B-207ENST00000574294 DDX19BQ9UMR2 479 aa20.29■□□□□ 0.84
TVP23B-207ENST00000574294 GAKO14976 1311 aa20.28■□□□□ 0.84
TVP23B-207ENST00000574294 OTOFQ9HC10 1997 aa20.28■□□□□ 0.84
TVP23B-207ENST00000574294 AK9Q5TCS8 1911 aa20.28■□□□□ 0.84
TVP23B-207ENST00000574294 LDHCP07864 332 aa20.28■□□□□ 0.84
TVP23B-207ENST00000574294 HSP90AB4PQ58FF6 505 aa20.28■□□□□ 0.84
TVP23B-207ENST00000574294 ERC1Q8IUD2 1116 aa20.28■□□□□ 0.84
TVP23B-207ENST00000574294 PANK1Q8TE04 598 aa20.28■□□□□ 0.84
TVP23B-207ENST00000574294 C1orf115Q9H7X2 142 aa20.28■□□□□ 0.84
TVP23B-207ENST00000574294 HMG20BQ9P0W2 317 aa20.28■□□□□ 0.84
TVP23B-207ENST00000574294 TNNI3KQ59H18 835 aa20.27■□□□□ 0.84
TVP23B-207ENST00000574294 CEP85Q6P2H3 762 aa20.27■□□□□ 0.84
TVP23B-207ENST00000574294 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.27■□□□□ 0.84
TVP23B-207ENST00000574294 IFNL1Q8IU54 200 aa20.27■□□□□ 0.84
TVP23B-207ENST00000574294 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.27■□□□□ 0.84
TVP23B-207ENST00000574294 ZNF512BQ96KM6 892 aaPredicted RBP20.27■□□□□ 0.84
TVP23B-207ENST00000574294 FPGT-TNNI3KV9GXZ4 949 aa20.27■□□□□ 0.84
TVP23B-207ENST00000574294 ENTPD3O75355 529 aa20.26■□□□□ 0.83
TVP23B-207ENST00000574294 DGKZQ13574 1117 aa20.26■□□□□ 0.83
TVP23B-207ENST00000574294 VGLL4Q14135 290 aa20.26■□□□□ 0.83
TVP23B-207ENST00000574294 CDAN1Q8IWY9 1227 aa20.26■□□□□ 0.83
TVP23B-207ENST00000574294 OPTNQ96CV9 577 aa20.26■□□□□ 0.83
TVP23B-207ENST00000574294 IDI2Q9BXS1 227 aa20.26■□□□□ 0.83
TVP23B-207ENST00000574294 ZNF341Q9BYN7 854 aa20.26■□□□□ 0.83
TVP23B-207ENST00000574294 MCOLN1Q9GZU1 580 aa20.26■□□□□ 0.83
TVP23B-207ENST00000574294 ELP3Q9H9T3 547 aa20.26■□□□□ 0.83
TVP23B-207ENST00000574294 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.26■□□□□ 0.83
TVP23B-207ENST00000574294 TESPA1A2RU30 521 aaPredicted RBP20.25■□□□□ 0.83
TVP23B-207ENST00000574294 PKN2Q16513 984 aaKnown RBP20.25■□□□□ 0.83
TVP23B-207ENST00000574294 TTC39AQ5SRH9 613 aa20.25■□□□□ 0.83
TVP23B-207ENST00000574294 CTU1Q7Z7A3 348 aaKnown RBP20.25■□□□□ 0.83
TVP23B-207ENST00000574294 RPAP2Q8IXW5 612 aaPredicted RBP20.25■□□□□ 0.83
TVP23B-207ENST00000574294 MROH7-TTC4A0A0A0MT08 1334 aa20.25■□□□□ 0.83
TVP23B-207ENST00000574294 HMMRO75330 724 aa20.24■□□□□ 0.83
TVP23B-207ENST00000574294 NPM3O75607 178 aaKnown RBP20.24■□□□□ 0.83
TVP23B-207ENST00000574294 TBC1D8O95759 1140 aa20.24■□□□□ 0.83
TVP23B-207ENST00000574294 GTF2A2P52657 109 aa20.24■□□□□ 0.83
TVP23B-207ENST00000574294 MECOMQ03112 1051 aa20.24■□□□□ 0.83
TVP23B-207ENST00000574294 ERO1BQ86YB8 467 aa20.24■□□□□ 0.83
TVP23B-207ENST00000574294 WRNIP1Q96S55 665 aa20.24■□□□□ 0.83
TVP23B-207ENST00000574294 GPR75-ASB3A0A0A6YYF3 556 aa20.23■□□□□ 0.83
TVP23B-207ENST00000574294 SPDYE5A6NIY4 337 aa20.23■□□□□ 0.83
TVP23B-207ENST00000574294 GPR25O00155 361 aa20.23■□□□□ 0.83
TVP23B-207ENST00000574294 MCAMP43121 646 aa20.23■□□□□ 0.83
TVP23B-207ENST00000574294 TCP10Q12799 353 aa20.23■□□□□ 0.83
TVP23B-207ENST00000574294 NFIAQ12857 509 aa20.23■□□□□ 0.83
TVP23B-207ENST00000574294 PDE3AQ14432 1141 aa20.23■□□□□ 0.83
TVP23B-207ENST00000574294 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.23■□□□□ 0.83
TVP23B-207ENST00000574294 LRP2BPQ9P2M1 347 aa20.23■□□□□ 0.83
TVP23B-207ENST00000574294 FAM198AQ9UFP1 575 aa20.23■□□□□ 0.83
TVP23B-207ENST00000574294 WDHD1O75717 1129 aaPredicted RBP20.22■□□□□ 0.83
TVP23B-207ENST00000574294 GJA5P36382 358 aa20.22■□□□□ 0.83
TVP23B-207ENST00000574294 BTDP43251 543 aa20.22■□□□□ 0.83
TVP23B-207ENST00000574294 ZNF296Q8WUU4 475 aaPredicted RBP20.22■□□□□ 0.83
TVP23B-207ENST00000574294 NSUN4Q96CB9 384 aaKnown RBP20.22■□□□□ 0.83
TVP23B-207ENST00000574294 NOL10Q9BSC4 688 aaKnown RBP20.22■□□□□ 0.83
TVP23B-207ENST00000574294 RAI14Q9P0K7 980 aa20.22■□□□□ 0.83
TVP23B-207ENST00000574294 FKTNO75072 461 aa20.21■□□□□ 0.83
TVP23B-207ENST00000574294 RGS3P49796 1198 aa20.21■□□□□ 0.83
TVP23B-207ENST00000574294 TMED8Q6PL24 325 aaPredicted RBP20.21■□□□□ 0.83
TVP23B-207ENST00000574294 DBNDD2Q9BQY9 259 aa20.21■□□□□ 0.83
TVP23B-207ENST00000574294 ZBTB40Q9NUA8 1239 aa20.21■□□□□ 0.83
TVP23B-207ENST00000574294 ZNF112Q9UJU3 913 aa20.21■□□□□ 0.83
TVP23B-207ENST00000574294 SNCAIPQ9Y6H5 919 aa20.21■□□□□ 0.83
TVP23B-207ENST00000574294 RFX7Q2KHR2 1363 aa20.21■□□□□ 0.83
TVP23B-207ENST00000574294 IGF2BP3O00425 579 aaKnown RBP eCLIP20.2■□□□□ 0.82
TVP23B-207ENST00000574294 PLCG2P16885 1265 aa20.2■□□□□ 0.82
TVP23B-207ENST00000574294 PPATQ06203 517 aa20.2■□□□□ 0.82
TVP23B-207ENST00000574294 PI16Q6UXB8 463 aa20.2■□□□□ 0.82
TVP23B-207ENST00000574294 OTUD5Q96G74 571 aa20.2■□□□□ 0.82
TVP23B-207ENST00000574294 MS4A4AQ96JQ5 239 aa20.2■□□□□ 0.82
TVP23B-207ENST00000574294 ZCCHC17Q9NP64 241 aaKnown RBP20.2■□□□□ 0.82
TVP23B-207ENST00000574294 COG6Q9Y2V7 657 aa20.2■□□□□ 0.82
TVP23B-207ENST00000574294 DOCK2Q92608 1830 aa20.19■□□□□ 0.82
TVP23B-207ENST00000574294 BAG3O95817 575 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms