RNA–Protein interactions for RNA: ENST00000573360.5

TVP23A-207, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 3,677 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-207ENST00000573360 TTC14Q96N46 770 aa16.39■□□□□ 0.21
TVP23A-207ENST00000573360 KCNQ5Q9NR82 932 aa16.39■□□□□ 0.21
TVP23A-207ENST00000573360 CPLX1O14810 134 aa16.39■□□□□ 0.21
TVP23A-207ENST00000573360 SRGNP10124 158 aa16.39■□□□□ 0.21
TVP23A-207ENST00000573360 LARP1BQ659C4 914 aaKnown RBP16.39■□□□□ 0.21
TVP23A-207ENST00000573360 KLF18A0A0U1RQI7 1052 aa16.39■□□□□ 0.21
TVP23A-207ENST00000573360 BBOX1O75936 387 aa16.39■□□□□ 0.21
TVP23A-207ENST00000573360 CD209Q9NNX6 404 aa16.39■□□□□ 0.21
TVP23A-207ENST00000573360 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.39■□□□□ 0.21
TVP23A-207ENST00000573360 USP17L12C9JPN9 530 aa16.38■□□□□ 0.21
TVP23A-207ENST00000573360 USP17L21D6R901 530 aa16.38■□□□□ 0.21
TVP23A-207ENST00000573360 RAD21O60216 631 aa16.38■□□□□ 0.21
TVP23A-207ENST00000573360 FBXO33Q7Z6M2 555 aa16.38■□□□□ 0.21
TVP23A-207ENST00000573360 NKX2-3Q8TAU0 364 aa16.38■□□□□ 0.21
TVP23A-207ENST00000573360 MCM9Q9NXL9 1143 aa16.38■□□□□ 0.21
TVP23A-207ENST00000573360 GOLGA8BA8MQT2 603 aa16.38■□□□□ 0.21
TVP23A-207ENST00000573360 TOB2Q14106 344 aaPredicted RBP16.38■□□□□ 0.21
TVP23A-207ENST00000573360 ZSCAN30Q86W11 494 aa16.38■□□□□ 0.21
TVP23A-207ENST00000573360 MAPKAPK5Q8IW41 473 aa16.38■□□□□ 0.21
TVP23A-207ENST00000573360 NCOA7Q8NI08 942 aa16.38■□□□□ 0.21
TVP23A-207ENST00000573360 EPB41L4AQ9HCS5 686 aaPredicted RBP16.38■□□□□ 0.21
TVP23A-207ENST00000573360 H3BQV1 296 aa16.38■□□□□ 0.21
TVP23A-207ENST00000573360 FOXP2O15409 715 aa16.38■□□□□ 0.21
TVP23A-207ENST00000573360 FIBPO43427 364 aa16.38■□□□□ 0.21
TVP23A-207ENST00000573360 CYP2D6P10635 497 aa16.38■□□□□ 0.21
TVP23A-207ENST00000573360 IFFO2Q5TF58 517 aa16.38■□□□□ 0.21
TVP23A-207ENST00000573360 KIAA0825Q8IV33 1275 aa16.38■□□□□ 0.21
TVP23A-207ENST00000573360 CMTR1Q8N1G2 835 aaKnown RBP16.38■□□□□ 0.21
TVP23A-207ENST00000573360 GPT2Q8TD30 523 aa16.38■□□□□ 0.21
TVP23A-207ENST00000573360 IFIT3O14879 490 aaKnown RBP16.37■□□□□ 0.21
TVP23A-207ENST00000573360 MFSD6Q6ZSS7 791 aa16.37■□□□□ 0.21
TVP23A-207ENST00000573360 R3HCC1Q9Y3T6 440 aaKnown RBP16.37■□□□□ 0.21
TVP23A-207ENST00000573360 TGFBRAP1Q8WUH2 860 aa16.37■□□□□ 0.21
TVP23A-207ENST00000573360 LEMD3Q9Y2U8 911 aa16.37■□□□□ 0.21
TVP23A-207ENST00000573360 ZDHHC9Q9Y397 364 aa16.37■□□□□ 0.21
TVP23A-207ENST00000573360 GSG1L2A8MUP6 293 aa16.36■□□□□ 0.21
TVP23A-207ENST00000573360 PATL2C9JE40 543 aaKnown RBP16.36■□□□□ 0.21
TVP23A-207ENST00000573360 NPR1P16066 1061 aa16.36■□□□□ 0.21
TVP23A-207ENST00000573360 DNTTIP2Q5QJE6 756 aaKnown RBP16.36■□□□□ 0.21
TVP23A-207ENST00000573360 OTUD7BQ6GQQ9 843 aa16.36■□□□□ 0.21
TVP23A-207ENST00000573360 SENP2Q9HC62 589 aa16.36■□□□□ 0.21
TVP23A-207ENST00000573360 FAM47AQ5JRC9 791 aa16.36■□□□□ 0.21
TVP23A-207ENST00000573360 TMEM63CQ9P1W3 806 aa16.36■□□□□ 0.21
TVP23A-207ENST00000573360 NHSQ6T4R5 1651 aa16.36■□□□□ 0.21
TVP23A-207ENST00000573360 TCRBV5S4A2TA0A5A2 114 aa16.35■□□□□ 0.21
TVP23A-207ENST00000573360 SYT1P21579 422 aa16.35■□□□□ 0.21
TVP23A-207ENST00000573360 MCM5P33992 734 aa16.35■□□□□ 0.21
TVP23A-207ENST00000573360 GLIPR1L2Q4G1C9 344 aa16.35■□□□□ 0.21
TVP23A-207ENST00000573360 TMEM67Q5HYA8 995 aa16.35■□□□□ 0.21
TVP23A-207ENST00000573360 MASTLQ96GX5 879 aa16.35■□□□□ 0.21
TVP23A-207ENST00000573360 USP17L8P0C7I0 530 aa16.35■□□□□ 0.21
TVP23A-207ENST00000573360 ATP2B4P23634 1241 aa16.35■□□□□ 0.21
TVP23A-207ENST00000573360 ALDH1B1P30837 517 aa16.35■□□□□ 0.21
TVP23A-207ENST00000573360 CACNB3P54284 484 aa16.35■□□□□ 0.21
TVP23A-207ENST00000573360 ANKRD1Q15327 319 aa16.35■□□□□ 0.21
TVP23A-207ENST00000573360 NSUN4Q96CB9 384 aaKnown RBP16.35■□□□□ 0.21
TVP23A-207ENST00000573360 RTL9Q8NET4 1388 aa16.35■□□□□ 0.21
TVP23A-207ENST00000573360 NEDD4P46934 1319 aa16.35■□□□□ 0.21
TVP23A-207ENST00000573360 POLR3DP05423 398 aaPredicted RBP16.34■□□□□ 0.21
TVP23A-207ENST00000573360 TM6SF1Q9BZW5 370 aa16.34■□□□□ 0.21
TVP23A-207ENST00000573360 RBM10P98175 930 aaKnown RBP16.34■□□□□ 0.21
TVP23A-207ENST00000573360 ZNF384Q8TF68 577 aa16.34■□□□□ 0.21
TVP23A-207ENST00000573360 GJB4Q9NTQ9 266 aa16.34■□□□□ 0.21
TVP23A-207ENST00000573360 TFIP11Q9UBB9 837 aaKnown RBP16.34■□□□□ 0.21
TVP23A-207ENST00000573360 AOC3Q16853 763 aa16.34■□□□□ 0.21
TVP23A-207ENST00000573360 CRY2Q49AN0 593 aa16.34■□□□□ 0.21
TVP23A-207ENST00000573360 CYB5R4Q7L1T6 521 aa16.34■□□□□ 0.21
TVP23A-207ENST00000573360 hCG_1642624A0A1W2PR95 340 aa16.33■□□□□ 0.21
TVP23A-207ENST00000573360 DYNLL2Q96FJ2 89 aa16.33■□□□□ 0.21
TVP23A-207ENST00000573360 UBAC1Q9BSL1 405 aa16.33■□□□□ 0.21
TVP23A-207ENST00000573360 TTF2Q9UNY4 1162 aaKnown RBP16.33■□□□□ 0.21
TVP23A-207ENST00000573360 STX6O43752 255 aa16.33■□□□□ 0.2
TVP23A-207ENST00000573360 ZSCAN31Q96LW9 406 aaPredicted RBP16.33■□□□□ 0.2
TVP23A-207ENST00000573360 SCAF8Q9UPN6 1271 aaKnown RBP16.33■□□□□ 0.2
TVP23A-207ENST00000573360 TCP10Q12799 353 aa16.33■□□□□ 0.2
TVP23A-207ENST00000573360 ILDR1Q86SU0 546 aaPredicted RBP16.33■□□□□ 0.2
TVP23A-207ENST00000573360 WDR66Q8TBY9 1149 aa16.33■□□□□ 0.2
TVP23A-207ENST00000573360 SH3RF3Q8TEJ3 882 aaPredicted RBP16.33■□□□□ 0.2
TVP23A-207ENST00000573360 ZNF512BQ96KM6 892 aaPredicted RBP16.33■□□□□ 0.2
TVP23A-207ENST00000573360 CRNKL1Q9BZJ0 848 aaKnown RBP16.33■□□□□ 0.2
TVP23A-207ENST00000573360 ATP6V0A2Q9Y487 856 aa16.33■□□□□ 0.2
TVP23A-207ENST00000573360 ERICH2A1L162 156 aa16.32■□□□□ 0.2
TVP23A-207ENST00000573360 SCRN1Q12765 414 aa16.32■□□□□ 0.2
TVP23A-207ENST00000573360 ZSCAN29Q8IWY8 852 aaPredicted RBP16.32■□□□□ 0.2
TVP23A-207ENST00000573360 SLURP2P0DP57 97 aa16.32■□□□□ 0.2
TVP23A-207ENST00000573360 ZNF445P59923 1031 aa16.32■□□□□ 0.2
TVP23A-207ENST00000573360 PPARAQ07869 468 aa16.32■□□□□ 0.2
TVP23A-207ENST00000573360 SLC44A5Q8NCS7 719 aa16.32■□□□□ 0.2
TVP23A-207ENST00000573360 SYAP1Q96A49 352 aaPredicted RBP16.32■□□□□ 0.2
TVP23A-207ENST00000573360 SH2B1Q9NRF2 756 aaPredicted RBP16.32■□□□□ 0.2
TVP23A-207ENST00000573360 ZSWIM5Q9P217 1185 aa16.32■□□□□ 0.2
TVP23A-207ENST00000573360 MBD3O95983 291 aa16.32■□□□□ 0.2
TVP23A-207ENST00000573360 ADD1P35611 737 aaKnown RBP16.32■□□□□ 0.2
TVP23A-207ENST00000573360 ATP2B2Q01814 1243 aa16.32■□□□□ 0.2
TVP23A-207ENST00000573360 PHKBQ93100 1093 aa16.32■□□□□ 0.2
TVP23A-207ENST00000573360 CCDC69A6NI79 296 aa16.31■□□□□ 0.2
TVP23A-207ENST00000573360 PPIP5K2O43314 1243 aa16.31■□□□□ 0.2
TVP23A-207ENST00000573360 RAD17O75943 681 aa16.31■□□□□ 0.2
TVP23A-207ENST00000573360 HMGB1P09429 215 aaKnown RBP16.31■□□□□ 0.2
TVP23A-207ENST00000573360 BTDP43251 543 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms