RNA–Protein interactions for RNA: ENST00000573325.1

ABR-220, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 471 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-220ENST00000573325 KCNH4Q9UQ05 1017 aa13.79□□□□□ -0.2
ABR-220ENST00000573325 PHF20L1A8MW92 1017 aa13.78□□□□□ -0.2
ABR-220ENST00000573325 TLR2O60603 784 aa13.78□□□□□ -0.2
ABR-220ENST00000573325 CIAO1O76071 339 aa13.78□□□□□ -0.2
ABR-220ENST00000573325 DIXDC1Q155Q3 683 aa13.78□□□□□ -0.2
ABR-220ENST00000573325 CAVIN4Q5BKX8 364 aa13.78□□□□□ -0.2
ABR-220ENST00000573325 C17orf99Q6UX52 265 aa13.78□□□□□ -0.2
ABR-220ENST00000573325 SH3BP5LQ7L8J4 393 aa13.78□□□□□ -0.2
ABR-220ENST00000573325 ERO1BQ86YB8 467 aa13.78□□□□□ -0.2
ABR-220ENST00000573325 EFCC1Q9HA90 598 aa13.78□□□□□ -0.2
ABR-220ENST00000573325 PTCH2Q9Y6C5 1203 aa13.78□□□□□ -0.2
ABR-220ENST00000573325 SALL1Q9NSC2 1324 aa13.78□□□□□ -0.2
ABR-220ENST00000573325 LAMA3Q16787 3333 aa13.77□□□□□ -0.2
ABR-220ENST00000573325 SLURP2P0DP57 97 aa13.77□□□□□ -0.21
ABR-220ENST00000573325 PHKA1P46020 1223 aa13.77□□□□□ -0.21
ABR-220ENST00000573325 PPIL2Q13356 520 aa13.77□□□□□ -0.21
ABR-220ENST00000573325 FAM151AQ8WW52 585 aa13.77□□□□□ -0.21
ABR-220ENST00000573325 WRNIP1Q96S55 665 aa13.77□□□□□ -0.21
ABR-220ENST00000573325 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.77□□□□□ -0.21
ABR-220ENST00000573325 FBXO3Q9UK99 471 aa13.77□□□□□ -0.21
ABR-220ENST00000573325 GAKO14976 1311 aa13.76□□□□□ -0.21
ABR-220ENST00000573325 ADORA1P30542 326 aa13.76□□□□□ -0.21
ABR-220ENST00000573325 ZEB1P37275 1124 aaPredicted RBP13.76□□□□□ -0.21
ABR-220ENST00000573325 TNNI2P48788 182 aa13.76□□□□□ -0.21
ABR-220ENST00000573325 NOL9Q5SY16 702 aaKnown RBP13.76□□□□□ -0.21
ABR-220ENST00000573325 OTUD7BQ6GQQ9 843 aa13.76□□□□□ -0.21
ABR-220ENST00000573325 GPAT2Q6NUI2 795 aa13.76□□□□□ -0.21
ABR-220ENST00000573325 UBE2Q1Q7Z7E8 422 aa13.76□□□□□ -0.21
ABR-220ENST00000573325 COPRSQ9NQ92 184 aa13.76□□□□□ -0.21
ABR-220ENST00000573325 PA2G4Q9UQ80 394 aaKnown RBP13.76□□□□□ -0.21
ABR-220ENST00000573325 TRIOBPQ9H2D6 2365 aa13.75□□□□□ -0.21
ABR-220ENST00000573325 IFIT1P09914 478 aaKnown RBP13.75□□□□□ -0.21
ABR-220ENST00000573325 LACTBP83111 547 aaPredicted RBP13.75□□□□□ -0.21
ABR-220ENST00000573325 PPATQ06203 517 aa13.75□□□□□ -0.21
ABR-220ENST00000573325 MTX1Q13505 466 aa13.75□□□□□ -0.21
ABR-220ENST00000573325 TAF1CQ15572 869 aaPredicted RBP13.75□□□□□ -0.21
ABR-220ENST00000573325 MIGA2Q7L4E1 593 aa13.75□□□□□ -0.21
ABR-220ENST00000573325 VPS37DQ86XT2 251 aa13.75□□□□□ -0.21
ABR-220ENST00000573325 WDR66Q8TBY9 1149 aa13.75□□□□□ -0.21
ABR-220ENST00000573325 FAM163AQ96GL9 167 aaPredicted RBP13.75□□□□□ -0.21
ABR-220ENST00000573325 MAST3O60307 1309 aa13.74□□□□□ -0.21
ABR-220ENST00000573325 CETPP11597 493 aa13.74□□□□□ -0.21
ABR-220ENST00000573325 RASGRF1Q13972 1273 aa13.74□□□□□ -0.21
ABR-220ENST00000573325 SHISA4Q96DD7 197 aa13.74□□□□□ -0.21
ABR-220ENST00000573325 MEIS3Q99687 375 aa13.74□□□□□ -0.21
ABR-220ENST00000573325 IDI2Q9BXS1 227 aa13.74□□□□□ -0.21
ABR-220ENST00000573325 ZFYVE28Q9HCC9 887 aa13.74□□□□□ -0.21
ABR-220ENST00000573325 DDX4Q9NQI0 724 aaKnown RBP13.74□□□□□ -0.21
ABR-220ENST00000573325 NOB1Q9ULX3 412 aaKnown RBP13.74□□□□□ -0.21
ABR-220ENST00000573325 CSADQ9Y600 493 aa13.74□□□□□ -0.21
ABR-220ENST00000573325 PDS5AQ29RF7 1337 aaKnown RBP13.73□□□□□ -0.21
ABR-220ENST00000573325 WDHD1O75717 1129 aaPredicted RBP13.73□□□□□ -0.21
ABR-220ENST00000573325 SLC5A1P13866 664 aa13.73□□□□□ -0.21
ABR-220ENST00000573325 RARSP54136 660 aaKnown RBP13.73□□□□□ -0.21
ABR-220ENST00000573325 SNAPC2Q13487 334 aa13.73□□□□□ -0.21
ABR-220ENST00000573325 ATP2B3Q16720 1220 aa13.73□□□□□ -0.21
ABR-220ENST00000573325 ANKRD23Q86SG2 305 aa13.73□□□□□ -0.21
ABR-220ENST00000573325 TRIM47Q96LD4 638 aa13.73□□□□□ -0.21
ABR-220ENST00000573325 LRRFIP2Q9Y608 721 aaKnown RBP13.73□□□□□ -0.21
ABR-220ENST00000573325 SEMA3EO15041 775 aa13.72□□□□□ -0.21
ABR-220ENST00000573325 CT47B1P0C2W7 299 aaPredicted RBP13.72□□□□□ -0.21
ABR-220ENST00000573325 BCRP11274 1271 aa13.72□□□□□ -0.21
ABR-220ENST00000573325 RHBDL3P58872 404 aa13.72□□□□□ -0.21
ABR-220ENST00000573325 HABP4Q5JVS0 413 aaKnown RBP13.72□□□□□ -0.21
ABR-220ENST00000573325 CCDC102BQ68D86 513 aa13.72□□□□□ -0.21
ABR-220ENST00000573325 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.72□□□□□ -0.21
ABR-220ENST00000573325 ZNF341Q9BYN7 854 aa13.72□□□□□ -0.21
ABR-220ENST00000573325 SIL1Q9H173 461 aa13.72□□□□□ -0.21
ABR-220ENST00000573325 SMC4Q9NTJ3 1288 aa13.72□□□□□ -0.21
ABR-220ENST00000573325 TNNQ9UQP3 1299 aa13.72□□□□□ -0.21
ABR-220ENST00000573325 IL15P40933 162 aaPredicted RBP13.71□□□□□ -0.21
ABR-220ENST00000573325 TIMM10P62072 90 aa13.71□□□□□ -0.21
ABR-220ENST00000573325 TCP10Q12799 353 aa13.71□□□□□ -0.21
ABR-220ENST00000573325 SH3TC2Q8TF17 1288 aa13.71□□□□□ -0.21
ABR-220ENST00000573325 DDTLA6NHG4 134 aaPredicted RBP13.7□□□□□ -0.22
ABR-220ENST00000573325 FRAT2O75474 233 aaPredicted RBP13.7□□□□□ -0.22
ABR-220ENST00000573325 UBTFL1P0CB47 393 aaPredicted RBP13.7□□□□□ -0.22
ABR-220ENST00000573325 DCAF15Q66K64 600 aa13.7□□□□□ -0.22
ABR-220ENST00000573325 ARHGAP45Q92619 1136 aa13.7□□□□□ -0.22
ABR-220ENST00000573325 USP40Q9NVE5 1235 aa13.7□□□□□ -0.22
ABR-220ENST00000573325 CEP126Q9P2H0 1117 aa13.7□□□□□ -0.22
ABR-220ENST00000573325 A0A0C4DFX4 3053 aa13.7□□□□□ -0.22
ABR-220ENST00000573325 PDHXO00330 501 aa13.69□□□□□ -0.22
ABR-220ENST00000573325 CXCL11O14625 94 aa13.69□□□□□ -0.22
ABR-220ENST00000573325 ENTPD3O75355 529 aa13.69□□□□□ -0.22
ABR-220ENST00000573325 RGS3P49796 1198 aa13.69□□□□□ -0.22
ABR-220ENST00000573325 RRP1BQ14684 758 aaKnown RBP13.69□□□□□ -0.22
ABR-220ENST00000573325 MTFR1Q15390 333 aa13.69□□□□□ -0.22
ABR-220ENST00000573325 HOOK2Q96ED9 719 aa13.69□□□□□ -0.22
ABR-220ENST00000573325 SRRDQ9UH36 339 aa13.69□□□□□ -0.22
ABR-220ENST00000573325 CPA4Q9UI42 421 aa13.69□□□□□ -0.22
ABR-220ENST00000573325 AFG3L2Q9Y4W6 797 aa13.69□□□□□ -0.22
ABR-220ENST00000573325 GPR75-ASB3A0A0A6YYF3 556 aa13.68□□□□□ -0.22
ABR-220ENST00000573325 A0A0G2JLL6 359 aaPredicted RBP13.68□□□□□ -0.22
ABR-220ENST00000573325 NPM3O75607 178 aaKnown RBP13.68□□□□□ -0.22
ABR-220ENST00000573325 GNRH1P01148 92 aa13.68□□□□□ -0.22
ABR-220ENST00000573325 LDHBP07195 334 aaKnown RBP13.68□□□□□ -0.22
ABR-220ENST00000573325 PTPRAP18433 802 aa13.68□□□□□ -0.22
ABR-220ENST00000573325 OSBPP22059 807 aa13.68□□□□□ -0.22
ABR-220ENST00000573325 FXR1P51114 621 aaKnown RBP eCLIP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 168.8 ms