RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 MAGEB6Q8N7X4 407 aa13.03□□□□□ -0.32
RPAIN-212ENST00000573126 LPIN2Q92539 896 aa13.03□□□□□ -0.32
RPAIN-212ENST00000573126 AKAP11Q9UKA4 1901 aa13.02□□□□□ -0.32
RPAIN-212ENST00000573126 SKILP12757 684 aa13.02□□□□□ -0.32
RPAIN-212ENST00000573126 KRT40Q6A162 431 aa13.02□□□□□ -0.32
RPAIN-212ENST00000573126 SPATA5Q8NB90 893 aa13.02□□□□□ -0.32
RPAIN-212ENST00000573126 EPB41L4AQ9HCS5 686 aaPredicted RBP13.02□□□□□ -0.32
RPAIN-212ENST00000573126 ABCA3Q99758 1704 aa13.02□□□□□ -0.33
RPAIN-212ENST00000573126 ZBTB43O43298 467 aa13.02□□□□□ -0.33
RPAIN-212ENST00000573126 MBD4O95243 580 aa13.02□□□□□ -0.33
RPAIN-212ENST00000573126 ARMT1Q9H993 441 aa13.02□□□□□ -0.33
RPAIN-212ENST00000573126 SEC31BQ9NQW1 1179 aa13.02□□□□□ -0.33
RPAIN-212ENST00000573126 ATRNO75882 1429 aa13.02□□□□□ -0.33
RPAIN-212ENST00000573126 CCDC69A6NI79 296 aa13.01□□□□□ -0.33
RPAIN-212ENST00000573126 UQCRFS1P1P0C7P4 283 aa13.01□□□□□ -0.33
RPAIN-212ENST00000573126 TMEM67Q5HYA8 995 aa13.01□□□□□ -0.33
RPAIN-212ENST00000573126 IGDCC4Q8TDY8 1250 aa13.01□□□□□ -0.33
RPAIN-212ENST00000573126 ZNF592Q92610 1267 aa13.01□□□□□ -0.33
RPAIN-212ENST00000573126 BCL11BQ9C0K0 894 aaPredicted RBP13.01□□□□□ -0.33
RPAIN-212ENST00000573126 NAPBQ9H115 298 aa13.01□□□□□ -0.33
RPAIN-212ENST00000573126 RANBP6O60518 1105 aaKnown RBP13.01□□□□□ -0.33
RPAIN-212ENST00000573126 CDKL5O76039 1030 aa13.01□□□□□ -0.33
RPAIN-212ENST00000573126 FGFR2P21802 821 aa13.01□□□□□ -0.33
RPAIN-212ENST00000573126 SLC39A14Q15043 492 aa13.01□□□□□ -0.33
RPAIN-212ENST00000573126 MPHOSPH8Q99549 860 aa13.01□□□□□ -0.33
RPAIN-212ENST00000573126 LY9Q9HBG7 655 aa13.01□□□□□ -0.33
RPAIN-212ENST00000573126 TOMM22Q9NS69 142 aa13.01□□□□□ -0.33
RPAIN-212ENST00000573126 ZSWIM5Q9P217 1185 aa13.01□□□□□ -0.33
RPAIN-212ENST00000573126 GOLGA8AA7E2F4 631 aa13□□□□□ -0.33
RPAIN-212ENST00000573126 EXOC5O00471 708 aa13□□□□□ -0.33
RPAIN-212ENST00000573126 PRKAB2O43741 272 aa13□□□□□ -0.33
RPAIN-212ENST00000573126 SMC2O95347 1197 aa13□□□□□ -0.33
RPAIN-212ENST00000573126 CMA1P23946 247 aa13□□□□□ -0.33
RPAIN-212ENST00000573126 IARSP41252 1262 aaKnown RBP13□□□□□ -0.33
RPAIN-212ENST00000573126 RRP12Q5JTH9 1297 aaKnown RBP13□□□□□ -0.33
RPAIN-212ENST00000573126 SUSD4Q5VX71 490 aa13□□□□□ -0.33
RPAIN-212ENST00000573126 CPLX2Q6PUV4 134 aaKnown RBP13□□□□□ -0.33
RPAIN-212ENST00000573126 IFNL3Q8IZI9 196 aa13□□□□□ -0.33
RPAIN-212ENST00000573126 TRMT1Q9NXH9 659 aaKnown RBP13□□□□□ -0.33
RPAIN-212ENST00000573126 TACC3Q9Y6A5 838 aa13□□□□□ -0.33
RPAIN-212ENST00000573126 MROH5Q6ZUA9 1318 aa13□□□□□ -0.33
RPAIN-212ENST00000573126 IFIT3O14879 490 aaKnown RBP13□□□□□ -0.33
RPAIN-212ENST00000573126 IL6STP40189 918 aaPredicted RBP13□□□□□ -0.33
RPAIN-212ENST00000573126 NTRK3Q16288 839 aa13□□□□□ -0.33
RPAIN-212ENST00000573126 NBPF11Q86T75 865 aa13□□□□□ -0.33
RPAIN-212ENST00000573126 ZNF34Q8IZ26 560 aa13□□□□□ -0.33
RPAIN-212ENST00000573126 TMEM87BQ96K49 555 aa13□□□□□ -0.33
RPAIN-212ENST00000573126 CLIC6Q96NY7 704 aa13□□□□□ -0.33
RPAIN-212ENST00000573126 ZKSCAN3Q9BRR0 538 aa13□□□□□ -0.33
RPAIN-212ENST00000573126 FAM217BQ9NTX9 383 aaPredicted RBP13□□□□□ -0.33
RPAIN-212ENST00000573126 MYO5AQ9Y4I1 1855 aaKnown RBP12.99□□□□□ -0.33
RPAIN-212ENST00000573126 ERVV-1B6SEH8 477 aa12.99□□□□□ -0.33
RPAIN-212ENST00000573126 SLC5A1P13866 664 aa12.99□□□□□ -0.33
RPAIN-212ENST00000573126 SYKP43405 635 aa12.99□□□□□ -0.33
RPAIN-212ENST00000573126 CCZ1BP86790 482 aa12.99□□□□□ -0.33
RPAIN-212ENST00000573126 CCZ1P86791 482 aaPredicted RBP12.99□□□□□ -0.33
RPAIN-212ENST00000573126 MAP3K12Q12852 859 aa12.99□□□□□ -0.33
RPAIN-212ENST00000573126 CCDC82Q8N4S0 544 aa12.99□□□□□ -0.33
RPAIN-212ENST00000573126 SLC26A6Q9BXS9 759 aa12.99□□□□□ -0.33
RPAIN-212ENST00000573126 XPO4Q9C0E2 1151 aaKnown RBP12.99□□□□□ -0.33
RPAIN-212ENST00000573126 SLC12A7Q9Y666 1083 aa12.99□□□□□ -0.33
RPAIN-212ENST00000573126 LRP6O75581 1613 aa12.99□□□□□ -0.33
RPAIN-212ENST00000573126 MYH7P12883 1935 aa12.99□□□□□ -0.33
RPAIN-212ENST00000573126 PATL2C9JE40 543 aaKnown RBP12.99□□□□□ -0.33
RPAIN-212ENST00000573126 BCAMP50895 628 aa12.99□□□□□ -0.33
RPAIN-212ENST00000573126 SHC4Q6S5L8 630 aa12.99□□□□□ -0.33
RPAIN-212ENST00000573126 IFNKQ9P0W0 207 aa12.99□□□□□ -0.33
RPAIN-212ENST00000573126 CTIFO43310 598 aaKnown RBP12.98□□□□□ -0.33
RPAIN-212ENST00000573126 RBM6P78332 1123 aaKnown RBP12.98□□□□□ -0.33
RPAIN-212ENST00000573126 TRIM29Q14134 588 aa12.98□□□□□ -0.33
RPAIN-212ENST00000573126 MIGA1Q8NAN2 632 aa12.98□□□□□ -0.33
RPAIN-212ENST00000573126 IQSEC3Q9UPP2 1182 aaPredicted RBP12.98□□□□□ -0.33
RPAIN-212ENST00000573126 SLIT2O94813 1529 aa12.98□□□□□ -0.33
RPAIN-212ENST00000573126 NEMFO60524 1076 aa12.98□□□□□ -0.33
RPAIN-212ENST00000573126 LMOD1P29536 600 aaPredicted RBP12.98□□□□□ -0.33
RPAIN-212ENST00000573126 GUCY1A2P33402 732 aa12.98□□□□□ -0.33
RPAIN-212ENST00000573126 PTPAQ15257 358 aa12.98□□□□□ -0.33
RPAIN-212ENST00000573126 SGMS1Q86VZ5 419 aa12.98□□□□□ -0.33
RPAIN-212ENST00000573126 LCORLQ8N3X6 602 aa12.98□□□□□ -0.33
RPAIN-212ENST00000573126 CCDC94Q9BW85 323 aaPredicted RBP12.98□□□□□ -0.33
RPAIN-212ENST00000573126 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.98□□□□□ -0.33
RPAIN-212ENST00000573126 ITGB4P16144 1822 aa12.98□□□□□ -0.33
RPAIN-212ENST00000573126 SMTNL1A8MU46 457 aa12.97□□□□□ -0.33
RPAIN-212ENST00000573126 GSG1L2A8MUP6 293 aa12.97□□□□□ -0.33
RPAIN-212ENST00000573126 TDO2P48775 406 aa12.97□□□□□ -0.33
RPAIN-212ENST00000573126 NLRP12P59046 1061 aa12.97□□□□□ -0.33
RPAIN-212ENST00000573126 CEP135Q66GS9 1140 aa12.97□□□□□ -0.33
RPAIN-212ENST00000573126 CMTR1Q8N1G2 835 aaKnown RBP12.97□□□□□ -0.33
RPAIN-212ENST00000573126 DISP2A7MBM2 1401 aa12.97□□□□□ -0.33
RPAIN-212ENST00000573126 ATP1A3P13637 1013 aa12.97□□□□□ -0.33
RPAIN-212ENST00000573126 PNOCQ13519 176 aa12.97□□□□□ -0.33
RPAIN-212ENST00000573126 NAA30Q147X3 362 aaPredicted RBP12.97□□□□□ -0.33
RPAIN-212ENST00000573126 NCAPHQ15003 741 aa12.97□□□□□ -0.33
RPAIN-212ENST00000573126 SPECC1Q5M775 1068 aa12.97□□□□□ -0.33
RPAIN-212ENST00000573126 PPP4R3BQ5MIZ7 849 aa12.97□□□□□ -0.33
RPAIN-212ENST00000573126 AKNAD1Q5T1N1 836 aa12.97□□□□□ -0.33
RPAIN-212ENST00000573126 MFSD6Q6ZSS7 791 aa12.97□□□□□ -0.33
RPAIN-212ENST00000573126 TMC6Q7Z403 805 aa12.97□□□□□ -0.33
RPAIN-212ENST00000573126 CCDC112Q8NEF3 446 aa12.97□□□□□ -0.33
RPAIN-212ENST00000573126 MAP3K14Q99558 947 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms