RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 MPHOSPH10O00566 681 aaKnown RBP18.72■□□□□ 0.59
RAB40B-206ENST00000571995 IFIT1BQ5T764 474 aaKnown RBP18.72■□□□□ 0.59
RAB40B-206ENST00000571995 VPS54Q9P1Q0 977 aa18.72■□□□□ 0.59
RAB40B-206ENST00000571995 CYP19A1P11511 503 aaPredicted RBP18.72■□□□□ 0.59
RAB40B-206ENST00000571995 IFNL3Q8IZI9 196 aa18.72■□□□□ 0.59
RAB40B-206ENST00000571995 NCAPD2Q15021 1401 aa18.71■□□□□ 0.59
RAB40B-206ENST00000571995 NLRP5P59047 1200 aa18.71■□□□□ 0.59
RAB40B-206ENST00000571995 REREQ9P2R6 1566 aa18.71■□□□□ 0.59
RAB40B-206ENST00000571995 ERCC3P19447 782 aa18.71■□□□□ 0.59
RAB40B-206ENST00000571995 ISCA1Q9BUE6 129 aa18.71■□□□□ 0.59
RAB40B-206ENST00000571995 USP17L12C9JPN9 530 aa18.71■□□□□ 0.58
RAB40B-206ENST00000571995 USP17L21D6R901 530 aa18.71■□□□□ 0.58
RAB40B-206ENST00000571995 AP5Z1O43299 807 aa18.71■□□□□ 0.58
RAB40B-206ENST00000571995 CTDNEP1O95476 244 aa18.71■□□□□ 0.58
RAB40B-206ENST00000571995 FAM160A1Q05DH4 1040 aa18.71■□□□□ 0.58
RAB40B-206ENST00000571995 MYSM1Q5VVJ2 828 aa18.71■□□□□ 0.58
RAB40B-206ENST00000571995 TRMT44Q8IYL2 757 aaKnown RBP18.71■□□□□ 0.58
RAB40B-206ENST00000571995 CTCFLQ8NI51 663 aaPredicted RBP18.71■□□□□ 0.58
RAB40B-206ENST00000571995 RPGRQ92834 1020 aaKnown RBP18.71■□□□□ 0.58
RAB40B-206ENST00000571995 CLSTN1O94985 981 aa18.7■□□□□ 0.58
RAB40B-206ENST00000571995 SSBP05455 408 aaKnown RBP eCLIP18.7■□□□□ 0.58
RAB40B-206ENST00000571995 ANO1Q5XXA6 986 aa18.7■□□□□ 0.58
RAB40B-206ENST00000571995 DHX58Q96C10 678 aa18.7■□□□□ 0.58
RAB40B-206ENST00000571995 MED23Q9ULK4 1368 aa18.7■□□□□ 0.58
RAB40B-206ENST00000571995 PNOCQ13519 176 aa18.7■□□□□ 0.58
RAB40B-206ENST00000571995 GRAMD1CQ8IYS0 662 aa18.7■□□□□ 0.58
RAB40B-206ENST00000571995 BRMS1Q9HCU9 246 aa18.7■□□□□ 0.58
RAB40B-206ENST00000571995 ZSWIM5Q9P217 1185 aa18.7■□□□□ 0.58
RAB40B-206ENST00000571995 CARMIL3Q8ND23 1372 aa18.7■□□□□ 0.58
RAB40B-206ENST00000571995 ZNF202O95125 648 aa18.7■□□□□ 0.58
RAB40B-206ENST00000571995 CASP7P55210 303 aa18.7■□□□□ 0.58
RAB40B-206ENST00000571995 NR5A1Q13285 461 aa18.7■□□□□ 0.58
RAB40B-206ENST00000571995 ZNF174Q15697 407 aa18.7■□□□□ 0.58
RAB40B-206ENST00000571995 DIS3L2Q8IYB7 885 aaKnown RBP18.7■□□□□ 0.58
RAB40B-206ENST00000571995 CCDC112Q8NEF3 446 aa18.7■□□□□ 0.58
RAB40B-206ENST00000571995 RTCBQ9Y3I0 505 aaKnown RBP18.7■□□□□ 0.58
RAB40B-206ENST00000571995 UTYO14607 1347 aa18.69■□□□□ 0.58
RAB40B-206ENST00000571995 CATIPQ7Z7H3 387 aa18.69■□□□□ 0.58
RAB40B-206ENST00000571995 CCDC34Q96HJ3 373 aa18.69■□□□□ 0.58
RAB40B-206ENST00000571995 EPB41L2O43491 1005 aaKnown RBP18.69■□□□□ 0.58
RAB40B-206ENST00000571995 DPCR1Q3MIW9 517 aa18.69■□□□□ 0.58
RAB40B-206ENST00000571995 SLC4A9Q96Q91 983 aa18.69■□□□□ 0.58
RAB40B-206ENST00000571995 KIF13AQ9H1H9 1805 aa18.68■□□□□ 0.58
RAB40B-206ENST00000571995 ADD2P35612 726 aa18.68■□□□□ 0.58
RAB40B-206ENST00000571995 ZHX3Q9H4I2 956 aa18.68■□□□□ 0.58
RAB40B-206ENST00000571995 TOM1O60784 492 aa18.68■□□□□ 0.58
RAB40B-206ENST00000571995 ZNF75DP51815 510 aa18.68■□□□□ 0.58
RAB40B-206ENST00000571995 PTF1AQ7RTS3 328 aa18.68■□□□□ 0.58
RAB40B-206ENST00000571995 FBXO18Q8NFZ0 1043 aa18.68■□□□□ 0.58
RAB40B-206ENST00000571995 NEDD4P46934 1319 aa18.67■□□□□ 0.58
RAB40B-206ENST00000571995 GOLGB1Q14789 3259 aaKnown RBP18.67■□□□□ 0.58
RAB40B-206ENST00000571995 SFPQP23246 707 aaKnown RBP eCLIP18.67■□□□□ 0.58
RAB40B-206ENST00000571995 CDC27P30260 824 aa18.67■□□□□ 0.58
RAB40B-206ENST00000571995 APOA5Q6Q788 366 aa18.67■□□□□ 0.58
RAB40B-206ENST00000571995 TPTE2Q6XPS3 522 aa18.67■□□□□ 0.58
RAB40B-206ENST00000571995 KCNG4Q8TDN1 519 aa18.67■□□□□ 0.58
RAB40B-206ENST00000571995 ESR2Q92731 530 aa18.67■□□□□ 0.58
RAB40B-206ENST00000571995 ZNF622Q969S3 477 aaKnown RBP eCLIP18.67■□□□□ 0.58
RAB40B-206ENST00000571995 ZSWIM4Q9H7M6 989 aa18.67■□□□□ 0.58
RAB40B-206ENST00000571995 KIF28PB7ZC32 967 aa18.67■□□□□ 0.58
RAB40B-206ENST00000571995 ZNF444Q8N0Y2 327 aaPredicted RBP18.67■□□□□ 0.58
RAB40B-206ENST00000571995 CELF1Q92879 486 aaKnown RBP18.67■□□□□ 0.58
RAB40B-206ENST00000571995 MST1RQ04912 1400 aa18.66■□□□□ 0.58
RAB40B-206ENST00000571995 RIPOR2Q9Y4F9 1068 aa18.66■□□□□ 0.58
RAB40B-206ENST00000571995 PFKFB1P16118 471 aa18.66■□□□□ 0.58
RAB40B-206ENST00000571995 CDC25AP30304 524 aa18.66■□□□□ 0.58
RAB40B-206ENST00000571995 MCM7P33993 719 aa18.66■□□□□ 0.58
RAB40B-206ENST00000571995 PDLIM2Q96JY6 352 aa18.66■□□□□ 0.58
RAB40B-206ENST00000571995 TRIM34Q9BYJ4 488 aa18.66■□□□□ 0.58
RAB40B-206ENST00000571995 POLR2DO15514 142 aaKnown RBP18.66■□□□□ 0.58
RAB40B-206ENST00000571995 PTPN14Q15678 1187 aa18.66■□□□□ 0.58
RAB40B-206ENST00000571995 LRP10Q7Z4F1 713 aa18.66■□□□□ 0.58
RAB40B-206ENST00000571995 MAPKAPK5Q8IW41 473 aa18.66■□□□□ 0.58
RAB40B-206ENST00000571995 NMT2O60551 498 aa18.65■□□□□ 0.58
RAB40B-206ENST00000571995 CASP1P29466 404 aa18.65■□□□□ 0.58
RAB40B-206ENST00000571995 ZNF274Q96GC6 653 aaPredicted RBP18.65■□□□□ 0.58
RAB40B-206ENST00000571995 AKAP12Q02952 1782 aa18.65■□□□□ 0.58
RAB40B-206ENST00000571995 CIAO1O76071 339 aa18.65■□□□□ 0.58
RAB40B-206ENST00000571995 GOLGA8HP0CJ92 632 aa18.65■□□□□ 0.58
RAB40B-206ENST00000571995 DIXDC1Q155Q3 683 aa18.65■□□□□ 0.58
RAB40B-206ENST00000571995 LLPHQ9BRT6 129 aaKnown RBP18.65■□□□□ 0.58
RAB40B-206ENST00000571995 CPVLQ9H3G5 476 aa18.65■□□□□ 0.58
RAB40B-206ENST00000571995 HOOK1Q9UJC3 728 aaKnown RBP18.65■□□□□ 0.58
RAB40B-206ENST00000571995 PXDNLA1KZ92 1463 aa18.65■□□□□ 0.58
RAB40B-206ENST00000571995 FAM170AA1A519 330 aa18.65■□□□□ 0.58
RAB40B-206ENST00000571995 GUCY1A2P33402 732 aa18.65■□□□□ 0.58
RAB40B-206ENST00000571995 RPS8P62241 208 aaKnown RBP18.65■□□□□ 0.58
RAB40B-206ENST00000571995 MSL1Q68DK7 614 aa18.65■□□□□ 0.58
RAB40B-206ENST00000571995 RIOK3O14730 519 aaKnown RBP18.64■□□□□ 0.57
RAB40B-206ENST00000571995 ITPK1Q13572 414 aa18.64■□□□□ 0.57
RAB40B-206ENST00000571995 AKNAD1Q5T1N1 836 aa18.64■□□□□ 0.57
RAB40B-206ENST00000571995 RNF41Q9H4P4 317 aaPredicted RBP18.64■□□□□ 0.57
RAB40B-206ENST00000571995 UBN2Q6ZU65 1347 aa18.64■□□□□ 0.57
RAB40B-206ENST00000571995 VWA3AA6NCI4 1184 aa18.64■□□□□ 0.57
RAB40B-206ENST00000571995 FDPSP14324 419 aaKnown RBP18.64■□□□□ 0.57
RAB40B-206ENST00000571995 HEATR3Q7Z4Q2 680 aa18.64■□□□□ 0.57
RAB40B-206ENST00000571995 MARCH10Q8NA82 808 aaPredicted RBP18.64■□□□□ 0.57
RAB40B-206ENST00000571995 CACTINQ8WUQ7 758 aaKnown RBP18.64■□□□□ 0.57
RAB40B-206ENST00000571995 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.64■□□□□ 0.57
RAB40B-206ENST00000571995 SRCAPQ6ZRS2 3230 aa18.64■□□□□ 0.57
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