RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 PPP6R2O75170 966 aa17.68■□□□□ 0.42
SMG6-207ENST00000570756 RFX5P48382 616 aaPredicted RBP17.68■□□□□ 0.42
SMG6-207ENST00000570756 KIF23Q02241 960 aaPredicted RBP17.68■□□□□ 0.42
SMG6-207ENST00000570756 TUBB2AQ13885 445 aa17.68■□□□□ 0.42
SMG6-207ENST00000570756 ZMYM1Q5SVZ6 1142 aa17.68■□□□□ 0.42
SMG6-207ENST00000570756 TOGARAM2Q6ZUX3 1019 aa17.68■□□□□ 0.42
SMG6-207ENST00000570756 TUBB2BQ9BVA1 445 aa17.68■□□□□ 0.42
SMG6-207ENST00000570756 PAG1Q9NWQ8 432 aa17.68■□□□□ 0.42
SMG6-207ENST00000570756 VPS18Q9P253 973 aa17.68■□□□□ 0.42
SMG6-207ENST00000570756 RPS6KA5O75582 802 aa17.67■□□□□ 0.42
SMG6-207ENST00000570756 WDHD1O75717 1129 aaPredicted RBP17.67■□□□□ 0.42
SMG6-207ENST00000570756 NOP2P46087 812 aaKnown RBP17.67■□□□□ 0.42
SMG6-207ENST00000570756 PLEKHG2Q9H7P9 1386 aa17.67■□□□□ 0.42
SMG6-207ENST00000570756 CCDC175P0C221 793 aa17.67■□□□□ 0.42
SMG6-207ENST00000570756 MARCKSP29966 332 aaPredicted RBP17.67■□□□□ 0.42
SMG6-207ENST00000570756 USP5P45974 858 aa17.67■□□□□ 0.42
SMG6-207ENST00000570756 PNOCQ13519 176 aa17.67■□□□□ 0.42
SMG6-207ENST00000570756 TC2NQ8N9U0 490 aa17.67■□□□□ 0.42
SMG6-207ENST00000570756 HOOK1Q9UJC3 728 aaKnown RBP17.67■□□□□ 0.42
SMG6-207ENST00000570756 FAM237AA0A1B0GTK4 181 aa17.66■□□□□ 0.42
SMG6-207ENST00000570756 PRAMEF22A3QJZ6 481 aa17.66■□□□□ 0.42
SMG6-207ENST00000570756 GOLIM4O00461 696 aa17.66■□□□□ 0.42
SMG6-207ENST00000570756 PDE11AQ9HCR9 933 aa17.66■□□□□ 0.42
SMG6-207ENST00000570756 INTS13Q9NVM9 706 aa17.66■□□□□ 0.42
SMG6-207ENST00000570756 GOLGA8BA8MQT2 603 aa17.66■□□□□ 0.42
SMG6-207ENST00000570756 CUTAO60888 179 aa17.66■□□□□ 0.42
SMG6-207ENST00000570756 MCM6Q14566 821 aa17.66■□□□□ 0.42
SMG6-207ENST00000570756 BEND6Q5SZJ8 279 aaPredicted RBP17.66■□□□□ 0.42
SMG6-207ENST00000570756 CCDC102BQ68D86 513 aa17.66■□□□□ 0.42
SMG6-207ENST00000570756 METTL22Q9BUU2 404 aaPredicted RBP17.66■□□□□ 0.42
SMG6-207ENST00000570756 MKRN1Q9UHC7 482 aaKnown RBP17.66■□□□□ 0.42
SMG6-207ENST00000570756 RAB21Q9UL25 225 aa17.66■□□□□ 0.42
SMG6-207ENST00000570756 A0A1B0GUL7 405 aa17.65■□□□□ 0.42
SMG6-207ENST00000570756 KIF28PB7ZC32 967 aa17.65■□□□□ 0.42
SMG6-207ENST00000570756 MYD88Q99836 296 aa17.65■□□□□ 0.42
SMG6-207ENST00000570756 DACH1Q9UI36 760 aa17.65■□□□□ 0.42
SMG6-207ENST00000570756 KLF18A0A0U1RQI7 1052 aa17.64■□□□□ 0.42
SMG6-207ENST00000570756 PDIA6Q15084 440 aa17.64■□□□□ 0.42
SMG6-207ENST00000570756 RABL6Q3YEC7 729 aaPredicted RBP17.64■□□□□ 0.42
SMG6-207ENST00000570756 GBP3Q9H0R5 595 aa17.64■□□□□ 0.42
SMG6-207ENST00000570756 YY1AP1Q9H869 796 aa17.64■□□□□ 0.42
SMG6-207ENST00000570756 MST1RQ04912 1400 aa17.64■□□□□ 0.41
SMG6-207ENST00000570756 TUBBP07437 444 aa17.64■□□□□ 0.41
SMG6-207ENST00000570756 HSP90B2PQ58FF3 399 aa17.64■□□□□ 0.41
SMG6-207ENST00000570756 MSANTD4Q8NCY6 345 aa17.64■□□□□ 0.41
SMG6-207ENST00000570756 CNNM3Q8NE01 707 aa17.64■□□□□ 0.41
SMG6-207ENST00000570756 ACBD3Q9H3P7 528 aa17.64■□□□□ 0.41
SMG6-207ENST00000570756 CDC23Q9UJX2 597 aa17.64■□□□□ 0.41
SMG6-207ENST00000570756 MAST3O60307 1309 aa17.64■□□□□ 0.41
SMG6-207ENST00000570756 KIF5CO60282 957 aa17.63■□□□□ 0.41
SMG6-207ENST00000570756 MAGEA9P43362 315 aa17.63■□□□□ 0.41
SMG6-207ENST00000570756 ADKP55263 362 aaKnown RBP17.63■□□□□ 0.41
SMG6-207ENST00000570756 KARSQ15046 597 aaKnown RBP17.63■□□□□ 0.41
SMG6-207ENST00000570756 RESP18Q5W5W9 173 aa17.63■□□□□ 0.41
SMG6-207ENST00000570756 SHC4Q6S5L8 630 aa17.63■□□□□ 0.41
SMG6-207ENST00000570756 CADPS2Q86UW7 1296 aa17.63■□□□□ 0.41
SMG6-207ENST00000570756 ANKZF1Q9H8Y5 726 aa17.63■□□□□ 0.41
SMG6-207ENST00000570756 PHF8Q9UPP1 1060 aa17.63■□□□□ 0.41
SMG6-207ENST00000570756 C1orf167Q5SNV9 1468 aa17.63■□□□□ 0.41
SMG6-207ENST00000570756 PTPN21Q16825 1174 aa17.63■□□□□ 0.41
SMG6-207ENST00000570756 METTL16Q86W50 562 aaKnown RBP17.63■□□□□ 0.41
SMG6-207ENST00000570756 ELOA2Q8IYF1 753 aaPredicted RBP17.63■□□□□ 0.41
SMG6-207ENST00000570756 A0A0G2JLW4 131 aa17.62■□□□□ 0.41
SMG6-207ENST00000570756 RNF113AO15541 343 aaKnown RBP17.62■□□□□ 0.41
SMG6-207ENST00000570756 IMMTQ16891 758 aaKnown RBP17.62■□□□□ 0.41
SMG6-207ENST00000570756 ICE2Q659A1 982 aa17.62■□□□□ 0.41
SMG6-207ENST00000570756 PANX2Q96RD6 677 aa17.62■□□□□ 0.41
SMG6-207ENST00000570756 DESI2Q9BSY9 194 aa17.62■□□□□ 0.41
SMG6-207ENST00000570756 NAA15Q9BXJ9 866 aaKnown RBP17.62■□□□□ 0.41
SMG6-207ENST00000570756 ZSWIM4Q9H7M6 989 aa17.62■□□□□ 0.41
SMG6-207ENST00000570756 PCDHA5Q9Y5H7 936 aa17.62■□□□□ 0.41
SMG6-207ENST00000570756 PRC1O43663 620 aa17.62■□□□□ 0.41
SMG6-207ENST00000570756 FAM71BQ8TC56 605 aa17.62■□□□□ 0.41
SMG6-207ENST00000570756 SLAIN2Q9P270 581 aa17.62■□□□□ 0.41
SMG6-207ENST00000570756 L1RE1Q9UN81 338 aa17.62■□□□□ 0.41
SMG6-207ENST00000570756 HPS5Q9UPZ3 1129 aa17.62■□□□□ 0.41
SMG6-207ENST00000570756 GTF2A1P52655 376 aaPredicted RBP17.61■□□□□ 0.41
SMG6-207ENST00000570756 TTC31Q49AM3 519 aaPredicted RBP17.61■□□□□ 0.41
SMG6-207ENST00000570756 NUTM2AQ8IVF1 878 aaPredicted RBP17.61■□□□□ 0.41
SMG6-207ENST00000570756 RAI14Q9P0K7 980 aa17.61■□□□□ 0.41
SMG6-207ENST00000570756 KCNH3Q9ULD8 1083 aa17.61■□□□□ 0.41
SMG6-207ENST00000570756 NFE2L3Q9Y4A8 694 aa17.61■□□□□ 0.41
SMG6-207ENST00000570756 PXDNQ92626 1479 aa17.61■□□□□ 0.41
SMG6-207ENST00000570756 ZNF18P17022 549 aa17.61■□□□□ 0.41
SMG6-207ENST00000570756 VPS37DQ86XT2 251 aa17.61■□□□□ 0.41
SMG6-207ENST00000570756 MLKLQ8NB16 471 aa17.61■□□□□ 0.41
SMG6-207ENST00000570756 ENOX1Q8TC92 643 aaKnown RBP17.61■□□□□ 0.41
SMG6-207ENST00000570756 XAGE3Q8WTP9 111 aa17.61■□□□□ 0.41
SMG6-207ENST00000570756 NEUROD6Q96NK8 337 aa17.61■□□□□ 0.41
SMG6-207ENST00000570756 MRPL44Q9H9J2 332 aaKnown RBP17.61■□□□□ 0.41
SMG6-207ENST00000570756 GPHNQ9NQX3 736 aaPredicted RBP17.61■□□□□ 0.41
SMG6-207ENST00000570756 AKR1B15C9JRZ8 316 aaPredicted RBP17.6■□□□□ 0.41
SMG6-207ENST00000570756 CDKL5O76039 1030 aa17.6■□□□□ 0.41
SMG6-207ENST00000570756 PTPAQ15257 358 aa17.6■□□□□ 0.41
SMG6-207ENST00000570756 ARHGEF25Q86VW2 580 aa17.6■□□□□ 0.41
SMG6-207ENST00000570756 BRMS1Q9HCU9 246 aa17.6■□□□□ 0.41
SMG6-207ENST00000570756 MED4Q9NPJ6 270 aa17.6■□□□□ 0.41
SMG6-207ENST00000570756 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.6■□□□□ 0.41
SMG6-207ENST00000570756 GJB4Q9NTQ9 266 aa17.6■□□□□ 0.41
SMG6-207ENST00000570756 PUF60Q9UHX1 559 aaKnown RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms