RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 XRN1Q8IZH2 1706 aaKnown RBP17.61■□□□□ 0.41
USP43-202ENST00000570475 SART3Q15020 963 aaKnown RBP17.61■□□□□ 0.41
USP43-202ENST00000570475 SARM1Q6SZW1 724 aa17.61■□□□□ 0.41
USP43-202ENST00000570475 ASAP1Q9ULH1 1129 aa17.61■□□□□ 0.41
USP43-202ENST00000570475 KIF2AO00139 706 aaPredicted RBP17.61■□□□□ 0.41
USP43-202ENST00000570475 YEATS4O95619 227 aa17.61■□□□□ 0.41
USP43-202ENST00000570475 LONRF3Q496Y0 759 aa17.61■□□□□ 0.41
USP43-202ENST00000570475 UBAC1Q9BSL1 405 aa17.61■□□□□ 0.41
USP43-202ENST00000570475 PRDM1O75626 825 aa17.6■□□□□ 0.41
USP43-202ENST00000570475 SEC31AO94979 1220 aaKnown RBP17.6■□□□□ 0.41
USP43-202ENST00000570475 CYB5R4Q7L1T6 521 aa17.6■□□□□ 0.41
USP43-202ENST00000570475 WWC3Q9ULE0 1092 aa17.6■□□□□ 0.41
USP43-202ENST00000570475 GTF2E1P29083 439 aaPredicted RBP17.6■□□□□ 0.41
USP43-202ENST00000570475 CDC25BP30305 580 aa17.6■□□□□ 0.41
USP43-202ENST00000570475 CASQ1P31415 396 aa17.6■□□□□ 0.41
USP43-202ENST00000570475 ATL3Q6DD88 541 aa17.6■□□□□ 0.41
USP43-202ENST00000570475 TBC1D10CQ8IV04 446 aa17.6■□□□□ 0.41
USP43-202ENST00000570475 CABP5Q9NP86 173 aa17.6■□□□□ 0.41
USP43-202ENST00000570475 RAI14Q9P0K7 980 aa17.6■□□□□ 0.41
USP43-202ENST00000570475 NFE2L3Q9Y4A8 694 aa17.6■□□□□ 0.41
USP43-202ENST00000570475 IRS4O14654 1257 aaPredicted RBP17.6■□□□□ 0.41
USP43-202ENST00000570475 CDC27P30260 824 aa17.6■□□□□ 0.41
USP43-202ENST00000570475 MFSD6Q6ZSS7 791 aa17.6■□□□□ 0.41
USP43-202ENST00000570475 CCDC12Q8WUD4 166 aaPredicted RBP17.6■□□□□ 0.41
USP43-202ENST00000570475 NOL10Q9BSC4 688 aaKnown RBP17.6■□□□□ 0.41
USP43-202ENST00000570475 RANBP6O60518 1105 aaKnown RBP17.59■□□□□ 0.41
USP43-202ENST00000570475 MCAMP43121 646 aa17.59■□□□□ 0.41
USP43-202ENST00000570475 DIS3L2Q8IYB7 885 aaKnown RBP17.59■□□□□ 0.41
USP43-202ENST00000570475 SMARCE1Q969G3 411 aa17.59■□□□□ 0.41
USP43-202ENST00000570475 FAM208AQ9UK61 1670 aaKnown RBP17.59■□□□□ 0.41
USP43-202ENST00000570475 STARD3NLO95772 234 aa17.59■□□□□ 0.41
USP43-202ENST00000570475 CMA1P23946 247 aa17.59■□□□□ 0.41
USP43-202ENST00000570475 CASP1P29466 404 aa17.59■□□□□ 0.41
USP43-202ENST00000570475 ANTXR2P58335 489 aa17.59■□□□□ 0.41
USP43-202ENST00000570475 PUF60Q9UHX1 559 aaKnown RBP17.59■□□□□ 0.41
USP43-202ENST00000570475 PRKAB2O43741 272 aa17.59■□□□□ 0.41
USP43-202ENST00000570475 NR5A1Q13285 461 aa17.59■□□□□ 0.41
USP43-202ENST00000570475 PPFIBP1Q86W92 1011 aa17.59■□□□□ 0.41
USP43-202ENST00000570475 TCIRG1Q13488 830 aa17.58■□□□□ 0.41
USP43-202ENST00000570475 APOA5Q6Q788 366 aa17.58■□□□□ 0.41
USP43-202ENST00000570475 NBPF11Q86T75 865 aa17.58■□□□□ 0.41
USP43-202ENST00000570475 POLR3EQ9NVU0 708 aa17.58■□□□□ 0.41
USP43-202ENST00000570475 SERTAD1Q9UHV2 236 aa17.58■□□□□ 0.41
USP43-202ENST00000570475 DDX41Q9UJV9 622 aaKnown RBP17.58■□□□□ 0.41
USP43-202ENST00000570475 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.58■□□□□ 0.41
USP43-202ENST00000570475 SLC4A4Q9Y6R1 1079 aa17.58■□□□□ 0.41
USP43-202ENST00000570475 NWD1Q149M9 1564 aa17.58■□□□□ 0.4
USP43-202ENST00000570475 EVCP57679 992 aa17.58■□□□□ 0.4
USP43-202ENST00000570475 BMS1Q14692 1282 aaKnown RBP17.58■□□□□ 0.4
USP43-202ENST00000570475 SLC39A14Q15043 492 aa17.58■□□□□ 0.4
USP43-202ENST00000570475 PIH1D3Q9NQM4 214 aaKnown RBP17.58■□□□□ 0.4
USP43-202ENST00000570475 MAPK8IP1Q9UQF2 711 aa17.58■□□□□ 0.4
USP43-202ENST00000570475 MROH7-TTC4A0A0A0MT08 1334 aa17.58■□□□□ 0.4
USP43-202ENST00000570475 A0A1W2PQ27 194 aa17.58■□□□□ 0.4
USP43-202ENST00000570475 A0A1W2PQ64 194 aa17.58■□□□□ 0.4
USP43-202ENST00000570475 A0A1W2PQD8 194 aa17.58■□□□□ 0.4
USP43-202ENST00000570475 HSPA2P54652 639 aa17.58■□□□□ 0.4
USP43-202ENST00000570475 ZSCAN12O43309 604 aa17.57■□□□□ 0.4
USP43-202ENST00000570475 MAP3K12Q12852 859 aa17.57■□□□□ 0.4
USP43-202ENST00000570475 HLFQ16534 295 aa17.57■□□□□ 0.4
USP43-202ENST00000570475 HPS5Q9UPZ3 1129 aa17.57■□□□□ 0.4
USP43-202ENST00000570475 UBR1Q8IWV7 1749 aa17.57■□□□□ 0.4
USP43-202ENST00000570475 ETF1P62495 437 aaKnown RBP17.57■□□□□ 0.4
USP43-202ENST00000570475 WTAPQ15007 396 aa17.57■□□□□ 0.4
USP43-202ENST00000570475 RTN1Q16799 776 aa17.57■□□□□ 0.4
USP43-202ENST00000570475 BAG1Q99933 345 aaPredicted RBP17.57■□□□□ 0.4
USP43-202ENST00000570475 NACAP1Q9BZK3 213 aa17.57■□□□□ 0.4
USP43-202ENST00000570475 RGPD1P0DJD0 1748 aa17.56■□□□□ 0.4
USP43-202ENST00000570475 BICDL1Q6ZP65 573 aa17.56■□□□□ 0.4
USP43-202ENST00000570475 MB21D2Q8IYB1 491 aaPredicted RBP17.56■□□□□ 0.4
USP43-202ENST00000570475 SMYD4Q8IYR2 804 aaPredicted RBP17.56■□□□□ 0.4
USP43-202ENST00000570475 KRI1Q8N9T8 703 aaKnown RBP17.56■□□□□ 0.4
USP43-202ENST00000570475 JAG2Q9Y219 1238 aa17.56■□□□□ 0.4
USP43-202ENST00000570475 RBM6P78332 1123 aaKnown RBP17.56■□□□□ 0.4
USP43-202ENST00000570475 SHC4Q6S5L8 630 aa17.56■□□□□ 0.4
USP43-202ENST00000570475 KDM6AO15550 1401 aaPredicted RBP17.56■□□□□ 0.4
USP43-202ENST00000570475 PDE6AP16499 860 aa17.56■□□□□ 0.4
USP43-202ENST00000570475 IMPACTQ9P2X3 320 aa17.56■□□□□ 0.4
USP43-202ENST00000570475 GUCY1A2P33402 732 aa17.55■□□□□ 0.4
USP43-202ENST00000570475 CCP110O43303 1012 aa17.55■□□□□ 0.4
USP43-202ENST00000570475 CCT6AP40227 531 aaKnown RBP17.55■□□□□ 0.4
USP43-202ENST00000570475 CASP7P55210 303 aa17.55■□□□□ 0.4
USP43-202ENST00000570475 GRIN1Q05586 938 aa17.55■□□□□ 0.4
USP43-202ENST00000570475 ZSWIM5Q9P217 1185 aa17.55■□□□□ 0.4
USP43-202ENST00000570475 TULP1O00294 542 aaPredicted RBP17.55■□□□□ 0.4
USP43-202ENST00000570475 IL2RBP14784 551 aa17.55■□□□□ 0.4
USP43-202ENST00000570475 MCM6Q14566 821 aa17.55■□□□□ 0.4
USP43-202ENST00000570475 KIF4BQ2VIQ3 1234 aa17.55■□□□□ 0.4
USP43-202ENST00000570475 NYAP1Q6ZVC0 841 aa17.55■□□□□ 0.4
USP43-202ENST00000570475 EEF2KMTQ96G04 330 aa17.55■□□□□ 0.4
USP43-202ENST00000570475 CLCN6P51797 869 aa17.54■□□□□ 0.4
USP43-202ENST00000570475 GPIHBP1Q8IV16 184 aa17.54■□□□□ 0.4
USP43-202ENST00000570475 PCMTD1Q96MG8 357 aaPredicted RBP17.54■□□□□ 0.4
USP43-202ENST00000570475 IRX2Q9BZI1 471 aaPredicted RBP17.54■□□□□ 0.4
USP43-202ENST00000570475 SAMSN1Q9NSI8 373 aaKnown RBP17.54■□□□□ 0.4
USP43-202ENST00000570475 HEG1Q9ULI3 1381 aa17.54■□□□□ 0.4
USP43-202ENST00000570475 NCAPD2Q15021 1401 aa17.54■□□□□ 0.4
USP43-202ENST00000570475 ZBTB22O15209 634 aa17.54■□□□□ 0.4
USP43-202ENST00000570475 ZCCHC17Q9NP64 241 aaKnown RBP17.54■□□□□ 0.4
USP43-202ENST00000570475 VPS54Q9P1Q0 977 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms