RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 GPR75-ASB3A0A0A6YYF3 556 aa18.43■□□□□ 0.54
HERPUD1-219ENST00000570273 APPP05067 770 aa18.43■□□□□ 0.54
HERPUD1-219ENST00000570273 RPS12P25398 132 aaKnown RBP18.43■□□□□ 0.54
HERPUD1-219ENST00000570273 RBM5P52756 815 aaKnown RBP eCLIP18.43■□□□□ 0.54
HERPUD1-219ENST00000570273 CERS3Q8IU89 383 aa18.43■□□□□ 0.54
HERPUD1-219ENST00000570273 SERPINA10Q9UK55 444 aa18.43■□□□□ 0.54
HERPUD1-219ENST00000570273 MYH2Q9UKX2 1941 aa18.43■□□□□ 0.54
HERPUD1-219ENST00000570273 DICER1Q9UPY3 1922 aaKnown RBP18.43■□□□□ 0.54
HERPUD1-219ENST00000570273 ADAMTSL1Q8N6G6 1762 aa18.43■□□□□ 0.54
HERPUD1-219ENST00000570273 FOXP2O15409 715 aa18.42■□□□□ 0.54
HERPUD1-219ENST00000570273 PRKAB2O43741 272 aa18.42■□□□□ 0.54
HERPUD1-219ENST00000570273 PLCG2P16885 1265 aa18.42■□□□□ 0.54
HERPUD1-219ENST00000570273 GMPSP49915 693 aaPredicted RBP18.42■□□□□ 0.54
HERPUD1-219ENST00000570273 PPP4CP60510 307 aa18.42■□□□□ 0.54
HERPUD1-219ENST00000570273 OGFOD1Q8N543 542 aa18.42■□□□□ 0.54
HERPUD1-219ENST00000570273 SH3RF3Q8TEJ3 882 aaPredicted RBP18.42■□□□□ 0.54
HERPUD1-219ENST00000570273 MRIQ9BWK5 157 aa18.42■□□□□ 0.54
HERPUD1-219ENST00000570273 USP17L8P0C7I0 530 aa18.41■□□□□ 0.54
HERPUD1-219ENST00000570273 RBM25P49756 843 aaKnown RBP18.41■□□□□ 0.54
HERPUD1-219ENST00000570273 CFAP100Q494V2 611 aa18.41■□□□□ 0.54
HERPUD1-219ENST00000570273 TEX11Q8IYF3 940 aa18.41■□□□□ 0.54
HERPUD1-219ENST00000570273 ZDHHC15Q96MV8 337 aa18.41■□□□□ 0.54
HERPUD1-219ENST00000570273 NACAP1Q9BZK3 213 aa18.41■□□□□ 0.54
HERPUD1-219ENST00000570273 EPB41L4AQ9HCS5 686 aaPredicted RBP18.41■□□□□ 0.54
HERPUD1-219ENST00000570273 RPAP1Q9BWH6 1393 aaPredicted RBP18.41■□□□□ 0.54
HERPUD1-219ENST00000570273 PATL2C9JE40 543 aaKnown RBP18.4■□□□□ 0.54
HERPUD1-219ENST00000570273 HSPA4P34932 840 aa18.4■□□□□ 0.54
HERPUD1-219ENST00000570273 TDO2P48775 406 aa18.4■□□□□ 0.54
HERPUD1-219ENST00000570273 SDR42E1Q8WUS8 393 aa18.4■□□□□ 0.54
HERPUD1-219ENST00000570273 CTNNA3Q9UI47 895 aa18.4■□□□□ 0.54
HERPUD1-219ENST00000570273 GSG1L2A8MUP6 293 aa18.4■□□□□ 0.54
HERPUD1-219ENST00000570273 USP5P45974 858 aa18.4■□□□□ 0.54
HERPUD1-219ENST00000570273 RNF20Q5VTR2 975 aa18.4■□□□□ 0.54
HERPUD1-219ENST00000570273 CREB3L3Q68CJ9 461 aa18.4■□□□□ 0.54
HERPUD1-219ENST00000570273 APOBEC3HQ6NTF7 200 aaKnown RBP18.4■□□□□ 0.54
HERPUD1-219ENST00000570273 IFNL3Q8IZI9 196 aa18.4■□□□□ 0.54
HERPUD1-219ENST00000570273 NAPBQ9H115 298 aa18.4■□□□□ 0.54
HERPUD1-219ENST00000570273 PCDHAC2Q9Y5I4 1007 aa18.4■□□□□ 0.54
HERPUD1-219ENST00000570273 ZMYM6O95789 1325 aa18.39■□□□□ 0.53
HERPUD1-219ENST00000570273 SLC27A2O14975 620 aa18.39■□□□□ 0.53
HERPUD1-219ENST00000570273 RHBDL3P58872 404 aa18.39■□□□□ 0.53
HERPUD1-219ENST00000570273 ALX1Q15699 326 aa18.39■□□□□ 0.53
HERPUD1-219ENST00000570273 GPC2Q8N158 579 aa18.39■□□□□ 0.53
HERPUD1-219ENST00000570273 DPF2Q92785 391 aa18.39■□□□□ 0.53
HERPUD1-219ENST00000570273 DDRGK1Q96HY6 314 aa18.39■□□□□ 0.53
HERPUD1-219ENST00000570273 USP40Q9NVE5 1235 aa18.39■□□□□ 0.53
HERPUD1-219ENST00000570273 PALD1Q9ULE6 856 aa18.39■□□□□ 0.53
HERPUD1-219ENST00000570273 FGAP02671 866 aa18.38■□□□□ 0.53
HERPUD1-219ENST00000570273 NECTIN1Q15223 517 aa18.38■□□□□ 0.53
HERPUD1-219ENST00000570273 DLGAP5Q15398 846 aa18.38■□□□□ 0.53
HERPUD1-219ENST00000570273 MICALL2Q8IY33 904 aa18.38■□□□□ 0.53
HERPUD1-219ENST00000570273 SHTN1A0MZ66 631 aa18.37■□□□□ 0.53
HERPUD1-219ENST00000570273 ZKSCAN1P17029 563 aaPredicted RBP18.37■□□□□ 0.53
HERPUD1-219ENST00000570273 MMP14P50281 582 aa18.37■□□□□ 0.53
HERPUD1-219ENST00000570273 ZNF280AP59817 542 aaPredicted RBP18.37■□□□□ 0.53
HERPUD1-219ENST00000570273 IMMTQ16891 758 aaKnown RBP18.37■□□□□ 0.53
HERPUD1-219ENST00000570273 CDC42EP5Q6NZY7 148 aa18.37■□□□□ 0.53
HERPUD1-219ENST00000570273 GIMAP6Q6P9H5 292 aa18.37■□□□□ 0.53
HERPUD1-219ENST00000570273 TGFBRAP1Q8WUH2 860 aa18.37■□□□□ 0.53
HERPUD1-219ENST00000570273 ATP8A2Q9NTI2 1148 aa18.37■□□□□ 0.53
HERPUD1-219ENST00000570273 ZC3H4Q9UPT8 1303 aaKnown RBP18.36■□□□□ 0.53
HERPUD1-219ENST00000570273 SPDYE2BA6NHP3 402 aa18.36■□□□□ 0.53
HERPUD1-219ENST00000570273 SPDYE6P0CI01 402 aa18.36■□□□□ 0.53
HERPUD1-219ENST00000570273 ANAPC15P60006 121 aa18.36■□□□□ 0.53
HERPUD1-219ENST00000570273 MAPKAPK5Q8IW41 473 aa18.36■□□□□ 0.53
HERPUD1-219ENST00000570273 MYOZ2Q9NPC6 264 aa18.36■□□□□ 0.53
HERPUD1-219ENST00000570273 DCP1AQ9NPI6 582 aaPredicted RBP18.36■□□□□ 0.53
HERPUD1-219ENST00000570273 SNX14Q9Y5W7 946 aa18.36■□□□□ 0.53
HERPUD1-219ENST00000570273 CYP21A2P08686 494 aa18.35■□□□□ 0.53
HERPUD1-219ENST00000570273 HAND2P61296 217 aa18.35■□□□□ 0.53
HERPUD1-219ENST00000570273 PICALMQ13492 652 aa18.35■□□□□ 0.53
HERPUD1-219ENST00000570273 RASEFQ8IZ41 740 aa18.35■□□□□ 0.53
HERPUD1-219ENST00000570273 MTMR14Q8NCE2 650 aa18.35■□□□□ 0.53
HERPUD1-219ENST00000570273 KCNB2Q92953 911 aa18.35■□□□□ 0.53
HERPUD1-219ENST00000570273 TMOD2Q9NZR1 351 aa18.35■□□□□ 0.53
HERPUD1-219ENST00000570273 CNOT7Q9UIV1 285 aaKnown RBP18.35■□□□□ 0.53
HERPUD1-219ENST00000570273 FLT1P17948 1338 aa18.35■□□□□ 0.53
HERPUD1-219ENST00000570273 WDHD1O75717 1129 aaPredicted RBP18.34■□□□□ 0.53
HERPUD1-219ENST00000570273 DDNO94850 711 aaPredicted RBP18.34■□□□□ 0.53
HERPUD1-219ENST00000570273 YY1P25490 414 aa18.34■□□□□ 0.53
HERPUD1-219ENST00000570273 PRMT6Q96LA8 375 aaPredicted RBP18.34■□□□□ 0.53
HERPUD1-219ENST00000570273 TDRD3Q9H7E2 651 aaKnown RBP18.34■□□□□ 0.53
HERPUD1-219ENST00000570273 MCM9Q9NXL9 1143 aa18.34■□□□□ 0.53
HERPUD1-219ENST00000570273 RBM19Q9Y4C8 960 aaKnown RBP18.34■□□□□ 0.53
HERPUD1-219ENST00000570273 NAV1Q8NEY1 1877 aa18.34■□□□□ 0.53
HERPUD1-219ENST00000570273 H7C1D1 291 aa18.33■□□□□ 0.53
HERPUD1-219ENST00000570273 ZNF213O14771 459 aa18.33■□□□□ 0.53
HERPUD1-219ENST00000570273 LMOD1P29536 600 aaPredicted RBP18.33■□□□□ 0.53
HERPUD1-219ENST00000570273 RBM26Q5T8P6 1007 aaKnown RBP18.33■□□□□ 0.53
HERPUD1-219ENST00000570273 AMOTL1Q8IY63 956 aa18.33■□□□□ 0.53
HERPUD1-219ENST00000570273 GPRC5DQ9NZD1 345 aa18.33■□□□□ 0.53
HERPUD1-219ENST00000570273 ARPP21Q9UBL0 812 aaPredicted RBP18.33■□□□□ 0.53
HERPUD1-219ENST00000570273 TAF6LQ9Y6J9 622 aa18.33■□□□□ 0.53
HERPUD1-219ENST00000570273 CLRN2A0PK11 232 aa18.32■□□□□ 0.52
HERPUD1-219ENST00000570273 MINDY4BA8MYZ0 360 aa18.32■□□□□ 0.52
HERPUD1-219ENST00000570273 CACNB3P54284 484 aa18.32■□□□□ 0.52
HERPUD1-219ENST00000570273 KRT32Q14532 448 aa18.32■□□□□ 0.52
HERPUD1-219ENST00000570273 TBC1D10BQ4KMP7 808 aaPredicted RBP18.32■□□□□ 0.52
HERPUD1-219ENST00000570273 DPY19L2Q6NUT2 758 aa18.32■□□□□ 0.52
HERPUD1-219ENST00000570273 ZBED3Q96IU2 234 aaPredicted RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms