RNA–Protein interactions for RNA: ENST00000569895.3

RBFOX1-219, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-219ENST00000569895 DIXDC1Q155Q3 683 aa27.88■■■□□ 2.05
RBFOX1-219ENST00000569895 SLF2Q8IX21 1173 aa27.88■■■□□ 2.05
RBFOX1-219ENST00000569895 FAM151AQ8WW52 585 aa27.88■■■□□ 2.05
RBFOX1-219ENST00000569895 R3HDMLQ9H3Y0 253 aa27.88■■■□□ 2.05
RBFOX1-219ENST00000569895 SPTY2D1Q68D10 685 aaPredicted RBP27.87■■■□□ 2.05
RBFOX1-219ENST00000569895 CDC42EP5Q6NZY7 148 aa27.87■■■□□ 2.05
RBFOX1-219ENST00000569895 XAGE2Q96GT9 111 aa27.87■■■□□ 2.05
RBFOX1-219ENST00000569895 PDS5AQ29RF7 1337 aaKnown RBP27.87■■■□□ 2.05
RBFOX1-219ENST00000569895 RPAP1Q9BWH6 1393 aaPredicted RBP27.86■■■□□ 2.05
RBFOX1-219ENST00000569895 NEUROD6Q96NK8 337 aa27.86■■■□□ 2.05
RBFOX1-219ENST00000569895 WRNIP1Q96S55 665 aa27.86■■■□□ 2.05
RBFOX1-219ENST00000569895 USP40Q9NVE5 1235 aa27.86■■■□□ 2.05
RBFOX1-219ENST00000569895 HPS5Q9UPZ3 1129 aa27.86■■■□□ 2.05
RBFOX1-219ENST00000569895 TNNQ9UQP3 1299 aa27.86■■■□□ 2.05
RBFOX1-219ENST00000569895 GORABQ5T7V8 394 aa27.85■■■□□ 2.05
RBFOX1-219ENST00000569895 ERO1BQ86YB8 467 aa27.85■■■□□ 2.05
RBFOX1-219ENST00000569895 TMEM57Q8N5G2 664 aa27.85■■■□□ 2.05
RBFOX1-219ENST00000569895 MS4A4AQ96JQ5 239 aa27.85■■■□□ 2.05
RBFOX1-219ENST00000569895 ZNF341Q9BYN7 854 aa27.85■■■□□ 2.05
RBFOX1-219ENST00000569895 RASGRF1Q13972 1273 aa27.84■■■□□ 2.05
RBFOX1-219ENST00000569895 FBXO46Q6PJ61 603 aaPredicted RBP27.84■■■□□ 2.05
RBFOX1-219ENST00000569895 DZIP1Q86YF9 867 aaKnown RBP27.84■■■□□ 2.05
RBFOX1-219ENST00000569895 FTSJ3Q8IY81 847 aaKnown RBP27.84■■■□□ 2.05
RBFOX1-219ENST00000569895 OTUD5Q96G74 571 aa27.84■■■□□ 2.05
RBFOX1-219ENST00000569895 PTPN18Q99952 460 aa27.84■■■□□ 2.05
RBFOX1-219ENST00000569895 ABCF2Q9UG63 623 aa27.84■■■□□ 2.05
RBFOX1-219ENST00000569895 SPDYE5A6NIY4 337 aa27.83■■■□□ 2.05
RBFOX1-219ENST00000569895 WDHD1O75717 1129 aaPredicted RBP27.83■■■□□ 2.05
RBFOX1-219ENST00000569895 TCP10Q12799 353 aa27.83■■■□□ 2.05
RBFOX1-219ENST00000569895 CCL15-CCL14A0A0B4J2E2 113 aa27.82■■■□□ 2.04
RBFOX1-219ENST00000569895 PNMA6EA0A0J9YXQ4 647 aa27.82■■■□□ 2.04
RBFOX1-219ENST00000569895 CRHR2Q13324 411 aa27.82■■■□□ 2.04
RBFOX1-219ENST00000569895 CCL15Q16663 113 aa27.82■■■□□ 2.04
RBFOX1-219ENST00000569895 MIGA2Q7L4E1 593 aa27.82■■■□□ 2.04
RBFOX1-219ENST00000569895 CNKSR2Q8WXI2 1034 aa27.82■■■□□ 2.04
RBFOX1-219ENST00000569895 ERO1AQ96HE7 468 aa27.82■■■□□ 2.04
RBFOX1-219ENST00000569895 MYH13Q9UKX3 1938 aa27.82■■■□□ 2.04
RBFOX1-219ENST00000569895 ZKSCAN4Q969J2 545 aaPredicted RBP27.81■■■□□ 2.04
RBFOX1-219ENST00000569895 SNCAIPQ9Y6H5 919 aa27.81■■■□□ 2.04
RBFOX1-219ENST00000569895 CETPP11597 493 aa27.8■■■□□ 2.04
RBFOX1-219ENST00000569895 ERICH6Q7L0X2 663 aa27.8■■■□□ 2.04
RBFOX1-219ENST00000569895 BRI3BPQ8WY22 251 aa27.8■■■□□ 2.04
RBFOX1-219ENST00000569895 FAM163AQ96GL9 167 aaPredicted RBP27.8■■■□□ 2.04
RBFOX1-219ENST00000569895 ZFYVE28Q9HCC9 887 aa27.8■■■□□ 2.04
RBFOX1-219ENST00000569895 NFIAQ12857 509 aa27.79■■■□□ 2.04
RBFOX1-219ENST00000569895 SNAPC2Q13487 334 aa27.79■■■□□ 2.04
RBFOX1-219ENST00000569895 TRIM17Q9Y577 477 aa27.79■■■□□ 2.04
RBFOX1-219ENST00000569895 GAKO14976 1311 aa27.78■■■□□ 2.04
RBFOX1-219ENST00000569895 SOX10P56693 466 aa27.78■■■□□ 2.04
RBFOX1-219ENST00000569895 SP3Q02447 781 aa27.78■■■□□ 2.04
RBFOX1-219ENST00000569895 PPIL2Q13356 520 aa27.78■■■□□ 2.04
RBFOX1-219ENST00000569895 IDI2Q9BXS1 227 aa27.78■■■□□ 2.04
RBFOX1-219ENST00000569895 FAM198AQ9UFP1 575 aa27.78■■■□□ 2.04
RBFOX1-219ENST00000569895 ENTPD3O75355 529 aa27.77■■■□□ 2.04
RBFOX1-219ENST00000569895 ATP8B2P98198 1209 aa27.77■■■□□ 2.04
RBFOX1-219ENST00000569895 PPATQ06203 517 aa27.77■■■□□ 2.04
RBFOX1-219ENST00000569895 OS9Q13438 667 aaPredicted RBP27.77■■■□□ 2.04
RBFOX1-219ENST00000569895 ARHGEF6Q15052 776 aa27.77■■■□□ 2.04
RBFOX1-219ENST00000569895 TAF1CQ15572 869 aaPredicted RBP27.77■■■□□ 2.04
RBFOX1-219ENST00000569895 ZNF112Q9UJU3 913 aa27.77■■■□□ 2.04
RBFOX1-219ENST00000569895 ZBED9Q6R2W3 1325 aa27.76■■■□□ 2.03
RBFOX1-219ENST00000569895 UQCRFS1P1P0C7P4 283 aa27.76■■■□□ 2.03
RBFOX1-219ENST00000569895 GSTO1P78417 241 aa27.76■■■□□ 2.03
RBFOX1-219ENST00000569895 POLA2Q14181 598 aa27.76■■■□□ 2.03
RBFOX1-219ENST00000569895 ITPRIPQ8IWB1 547 aa27.76■■■□□ 2.03
RBFOX1-219ENST00000569895 SPATA5Q8NB90 893 aa27.76■■■□□ 2.03
RBFOX1-219ENST00000569895 ZCCHC17Q9NP64 241 aaKnown RBP27.76■■■□□ 2.03
RBFOX1-219ENST00000569895 OTOFQ9HC10 1997 aa27.76■■■□□ 2.03
RBFOX1-219ENST00000569895 LAMB1P07942 1786 aa27.76■■■□□ 2.03
RBFOX1-219ENST00000569895 IRF6O14896 467 aa27.75■■■□□ 2.03
RBFOX1-219ENST00000569895 LDHCP07864 332 aa27.75■■■□□ 2.03
RBFOX1-219ENST00000569895 RGS3P49796 1198 aa27.75■■■□□ 2.03
RBFOX1-219ENST00000569895 OTOP1Q7RTM1 612 aa27.75■■■□□ 2.03
RBFOX1-219ENST00000569895 SSH3Q8TE77 659 aa27.75■■■□□ 2.03
RBFOX1-219ENST00000569895 HMG20BQ9P0W2 317 aa27.75■■■□□ 2.03
RBFOX1-219ENST00000569895 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.75■■■□□ 2.03
RBFOX1-219ENST00000569895 INPP5BP32019 993 aa27.74■■■□□ 2.03
RBFOX1-219ENST00000569895 MECOMQ03112 1051 aa27.74■■■□□ 2.03
RBFOX1-219ENST00000569895 ZSCAN29Q8IWY8 852 aaPredicted RBP27.74■■■□□ 2.03
RBFOX1-219ENST00000569895 GPR108Q9NPR9 543 aa27.74■■■□□ 2.03
RBFOX1-219ENST00000569895 MROH7-TTC4A0A0A0MT08 1334 aa27.73■■■□□ 2.03
RBFOX1-219ENST00000569895 SURF6O75683 361 aaKnown RBP27.73■■■□□ 2.03
RBFOX1-219ENST00000569895 ARID4AP29374 1257 aaPredicted RBP27.73■■■□□ 2.03
RBFOX1-219ENST00000569895 BTDP43251 543 aa27.73■■■□□ 2.03
RBFOX1-219ENST00000569895 FAM43AQ8N2R8 423 aa27.73■■■□□ 2.03
RBFOX1-219ENST00000569895 CD99L2Q8TCZ2 262 aa27.73■■■□□ 2.03
RBFOX1-219ENST00000569895 EFCC1Q9HA90 598 aa27.73■■■□□ 2.03
RBFOX1-219ENST00000569895 ZBTB7BO15156 539 aaPredicted RBP27.72■■■□□ 2.03
RBFOX1-219ENST00000569895 MAP4K4O95819 1239 aaPredicted RBP27.72■■■□□ 2.03
RBFOX1-219ENST00000569895 CCDC158Q5M9N0 1113 aa27.72■■■□□ 2.03
RBFOX1-219ENST00000569895 ZFPM1Q8IX07 1006 aa27.72■■■□□ 2.03
RBFOX1-219ENST00000569895 GPR75-ASB3A0A0A6YYF3 556 aa27.71■■■□□ 2.03
RBFOX1-219ENST00000569895 NOL9Q5SY16 702 aaKnown RBP27.71■■■□□ 2.03
RBFOX1-219ENST00000569895 RAI14Q9P0K7 980 aa27.71■■■□□ 2.03
RBFOX1-219ENST00000569895 BTBD19C9JJ37 291 aa27.7■■■□□ 2.02
RBFOX1-219ENST00000569895 LRP2BPQ9P2M1 347 aa27.7■■■□□ 2.02
RBFOX1-219ENST00000569895 PTPN22Q9Y2R2 807 aa27.7■■■□□ 2.02
RBFOX1-219ENST00000569895 MS4A1P11836 297 aa27.69■■■□□ 2.02
RBFOX1-219ENST00000569895 TNNI3KQ59H18 835 aa27.69■■■□□ 2.02
RBFOX1-219ENST00000569895 TTC39AQ5SRH9 613 aa27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms