RNA–Protein interactions for RNA: ENST00000569801.5

SNX29-208, Transcript of sorting nexin 29, humanhuman

TSL 4

Gene SNX29, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-208ENST00000569801 COG5Q9UP83 839 aa10.72□□□□□ -0.69
SNX29-208ENST00000569801 REV3LO60673 3130 aa10.71□□□□□ -0.69
SNX29-208ENST00000569801 PRR23AA6NEV1 266 aa10.71□□□□□ -0.69
SNX29-208ENST00000569801 PROB1E7EW31 1015 aa10.71□□□□□ -0.69
SNX29-208ENST00000569801 PPP1R12BO60237 982 aaPredicted RBP10.71□□□□□ -0.69
SNX29-208ENST00000569801 ECE2O60344 883 aa10.71□□□□□ -0.69
SNX29-208ENST00000569801 HOXB7P09629 217 aa10.71□□□□□ -0.69
SNX29-208ENST00000569801 ZNF853P0CG23 659 aa10.71□□□□□ -0.69
SNX29-208ENST00000569801 FLT3LGP49771 235 aa10.71□□□□□ -0.69
SNX29-208ENST00000569801 GTF2A2P52657 109 aa10.71□□□□□ -0.69
SNX29-208ENST00000569801 DOK7Q18PE1 504 aa10.71□□□□□ -0.69
SNX29-208ENST00000569801 WASHC4Q2M389 1173 aa10.71□□□□□ -0.69
SNX29-208ENST00000569801 CCDC184Q52MB2 194 aa10.71□□□□□ -0.69
SNX29-208ENST00000569801 HSP90AB3PQ58FF7 597 aa10.71□□□□□ -0.69
SNX29-208ENST00000569801 SLC10A5Q5PT55 438 aa10.71□□□□□ -0.69
SNX29-208ENST00000569801 NLRP10Q86W26 655 aa10.71□□□□□ -0.69
SNX29-208ENST00000569801 DDX60Q8IY21 1712 aaKnown RBP10.71□□□□□ -0.69
SNX29-208ENST00000569801 UTP14AQ9BVJ6 771 aaKnown RBP10.71□□□□□ -0.69
SNX29-208ENST00000569801 MBIPQ9NS73 344 aa10.71□□□□□ -0.69
SNX29-208ENST00000569801 GVINP1Q7Z2Y8 2422 aa10.7□□□□□ -0.7
SNX29-208ENST00000569801 CACNA1HO95180 2353 aa10.7□□□□□ -0.7
SNX29-208ENST00000569801 POTEB3A0JP26 581 aa10.7□□□□□ -0.7
SNX29-208ENST00000569801 RIMBP2O15034 1052 aa10.7□□□□□ -0.7
SNX29-208ENST00000569801 USP17L8P0C7I0 530 aa10.7□□□□□ -0.7
SNX29-208ENST00000569801 FCGRTP55899 365 aa10.7□□□□□ -0.7
SNX29-208ENST00000569801 DUSP27Q5VZP5 1158 aa10.7□□□□□ -0.7
SNX29-208ENST00000569801 POTEBQ6S5H4 581 aa10.7□□□□□ -0.7
SNX29-208ENST00000569801 SP8Q8IXZ3 490 aa10.7□□□□□ -0.7
SNX29-208ENST00000569801 ELP3Q9H9T3 547 aa10.7□□□□□ -0.7
SNX29-208ENST00000569801 TAF1P21675 1872 aa10.7□□□□□ -0.7
SNX29-208ENST00000569801 COL4A6Q14031 1691 aa10.69□□□□□ -0.7
SNX29-208ENST00000569801 ABCC4O15439 1325 aa10.69□□□□□ -0.7
SNX29-208ENST00000569801 RIC3Q7Z5B4 369 aa10.69□□□□□ -0.7
SNX29-208ENST00000569801 AGBL3Q8NEM8 1001 aa10.69□□□□□ -0.7
SNX29-208ENST00000569801 NLRP3Q96P20 1036 aa10.69□□□□□ -0.7
SNX29-208ENST00000569801 IFT57Q9NWB7 429 aa10.69□□□□□ -0.7
SNX29-208ENST00000569801 USP9XQ93008 2570 aaPredicted RBP10.69□□□□□ -0.7
SNX29-208ENST00000569801 GCN1Q92616 2671 aaKnown RBP10.68□□□□□ -0.7
SNX29-208ENST00000569801 HCLS1P14317 486 aaPredicted RBP10.68□□□□□ -0.7
SNX29-208ENST00000569801 PBX2P40425 430 aa10.68□□□□□ -0.7
SNX29-208ENST00000569801 PLBD2Q8NHP8 589 aa10.68□□□□□ -0.7
SNX29-208ENST00000569801 ZNF428Q96B54 188 aa10.68□□□□□ -0.7
SNX29-208ENST00000569801 ISCA1Q9BUE6 129 aa10.68□□□□□ -0.7
SNX29-208ENST00000569801 DBF4Q9UBU7 674 aaPredicted RBP10.68□□□□□ -0.7
SNX29-208ENST00000569801 ZFYVE26Q68DK2 2539 aa10.68□□□□□ -0.7
SNX29-208ENST00000569801 SH3TC1Q8TE82 1336 aa10.67□□□□□ -0.7
SNX29-208ENST00000569801 BTBD19C9JJ37 291 aa10.67□□□□□ -0.7
SNX29-208ENST00000569801 ZEB1P37275 1124 aaPredicted RBP10.67□□□□□ -0.7
SNX29-208ENST00000569801 GNAI1P63096 354 aa10.67□□□□□ -0.7
SNX29-208ENST00000569801 IRF5Q13568 498 aa10.67□□□□□ -0.7
SNX29-208ENST00000569801 RSBN1LQ6PCB5 846 aaPredicted RBP10.67□□□□□ -0.7
SNX29-208ENST00000569801 FAM178BQ8IXR5 827 aa10.67□□□□□ -0.7
SNX29-208ENST00000569801 ANKRD13AQ8IZ07 590 aa10.67□□□□□ -0.7
SNX29-208ENST00000569801 ADSSL1Q8N142 457 aa10.67□□□□□ -0.7
SNX29-208ENST00000569801 HLA-CQ95604 372 aa10.67□□□□□ -0.7
SNX29-208ENST00000569801 CHAMP1Q96JM3 812 aa10.67□□□□□ -0.7
SNX29-208ENST00000569801 TRMT112Q9UI30 125 aaKnown RBP10.67□□□□□ -0.7
SNX29-208ENST00000569801 LRRC37A2A6NM11 1700 aa10.67□□□□□ -0.7
SNX29-208ENST00000569801 LRRC37AA6NMS7 1700 aa10.67□□□□□ -0.7
SNX29-208ENST00000569801 COL4A1P02462 1669 aa10.66□□□□□ -0.7
SNX29-208ENST00000569801 ATP5J2-PTCD1G3V325 749 aa10.66□□□□□ -0.7
SNX29-208ENST00000569801 WNT10BO00744 389 aa10.66□□□□□ -0.7
SNX29-208ENST00000569801 IREB2P48200 963 aaKnown RBP10.66□□□□□ -0.7
SNX29-208ENST00000569801 CALD1Q05682 793 aaKnown RBP10.66□□□□□ -0.7
SNX29-208ENST00000569801 C8orf58Q8NAV2 365 aa10.66□□□□□ -0.7
SNX29-208ENST00000569801 PBX4Q9BYU1 374 aa10.66□□□□□ -0.7
SNX29-208ENST00000569801 IRF2BPLQ9H1B7 796 aa10.66□□□□□ -0.7
SNX29-208ENST00000569801 HMX1Q9NP08 348 aaPredicted RBP10.66□□□□□ -0.7
SNX29-208ENST00000569801 ZCCHC17Q9NP64 241 aaKnown RBP10.66□□□□□ -0.7
SNX29-208ENST00000569801 HYPKQ9NX55 129 aa10.66□□□□□ -0.7
SNX29-208ENST00000569801 DUOX1Q9NRD9 1551 aa10.65□□□□□ -0.7
SNX29-208ENST00000569801 DDX60LQ5H9U9 1706 aaKnown RBP10.65□□□□□ -0.7
SNX29-208ENST00000569801 ELL2O00472 640 aaPredicted RBP10.65□□□□□ -0.7
SNX29-208ENST00000569801 DSG3P32926 999 aa10.65□□□□□ -0.7
SNX29-208ENST00000569801 EPHB4P54760 987 aa10.65□□□□□ -0.7
SNX29-208ENST00000569801 PUM1Q14671 1186 aaKnown RBP eCLIP10.65□□□□□ -0.7
SNX29-208ENST00000569801 CCDC129Q6ZRS4 1044 aa10.65□□□□□ -0.7
SNX29-208ENST00000569801 GMLQ99445 158 aa10.65□□□□□ -0.7
SNX29-208ENST00000569801 ALG13Q9NP73 1137 aaKnown RBP10.65□□□□□ -0.7
SNX29-208ENST00000569801 FOXD4L1Q9NU39 408 aa10.65□□□□□ -0.7
SNX29-208ENST00000569801 COL1A1P02452 1464 aaPredicted RBP10.65□□□□□ -0.7
SNX29-208ENST00000569801 USP2O75604 605 aaPredicted RBP10.64□□□□□ -0.71
SNX29-208ENST00000569801 BBOX1O75936 387 aa10.64□□□□□ -0.71
SNX29-208ENST00000569801 GRAPQ13588 217 aa10.64□□□□□ -0.71
SNX29-208ENST00000569801 DDX46Q7L014 1031 aaKnown RBP10.64□□□□□ -0.71
SNX29-208ENST00000569801 APOBEC3FQ8IUX4 373 aaKnown RBP10.64□□□□□ -0.71
SNX29-208ENST00000569801 GRAPLQ8TC17 118 aaPredicted RBP10.64□□□□□ -0.71
SNX29-208ENST00000569801 FAM89AQ96GI7 184 aa10.64□□□□□ -0.71
SNX29-208ENST00000569801 PHAXQ9H814 394 aaKnown RBP10.64□□□□□ -0.71
SNX29-208ENST00000569801 PRDM5Q9NQX1 630 aaPredicted RBP10.64□□□□□ -0.71
SNX29-208ENST00000569801 ZBTB22O15209 634 aa10.63□□□□□ -0.71
SNX29-208ENST00000569801 ATN1P54259 1190 aaPredicted RBP10.63□□□□□ -0.71
SNX29-208ENST00000569801 GOLGA2Q08379 1002 aa10.63□□□□□ -0.71
SNX29-208ENST00000569801 TRIM28Q13263 835 aaKnown RBP10.63□□□□□ -0.71
SNX29-208ENST00000569801 TSPYL6Q8N831 410 aa10.63□□□□□ -0.71
SNX29-208ENST00000569801 TSR2Q969E8 191 aaKnown RBP10.63□□□□□ -0.71
SNX29-208ENST00000569801 DEFB129Q9H1M3 183 aa10.63□□□□□ -0.71
SNX29-208ENST00000569801 LAMB1P07942 1786 aa10.62□□□□□ -0.71
SNX29-208ENST00000569801 ZNF316A6NFI3 1004 aaPredicted RBP10.62□□□□□ -0.71
SNX29-208ENST00000569801 GRXCR1A8MXD5 290 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms