RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 AXIN2Q9Y2T1 843 aa7.76□□□□□ -1.17
SMG1-217ENST00000569764 PDE4AP27815 886 aa7.75□□□□□ -1.17
SMG1-217ENST00000569764 ADD2P35612 726 aa7.75□□□□□ -1.17
SMG1-217ENST00000569764 DLGAP5Q15398 846 aa7.75□□□□□ -1.17
SMG1-217ENST00000569764 SLC4A10Q6U841 1118 aa7.75□□□□□ -1.17
SMG1-217ENST00000569764 NOP9Q86U38 636 aaKnown RBP7.75□□□□□ -1.17
SMG1-217ENST00000569764 APOBEC3FQ8IUX4 373 aaKnown RBP7.75□□□□□ -1.17
SMG1-217ENST00000569764 TMEM57Q8N5G2 664 aa7.75□□□□□ -1.17
SMG1-217ENST00000569764 TAF4BQ92750 862 aa7.75□□□□□ -1.17
SMG1-217ENST00000569764 MAP7D2Q96T17 732 aa7.75□□□□□ -1.17
SMG1-217ENST00000569764 SEZ6LQ9BYH1 1024 aa7.75□□□□□ -1.17
SMG1-217ENST00000569764 KDRP35968 1356 aa7.75□□□□□ -1.17
SMG1-217ENST00000569764 SLC5A1P13866 664 aa7.75□□□□□ -1.17
SMG1-217ENST00000569764 ZBED6P86452 979 aa7.75□□□□□ -1.17
SMG1-217ENST00000569764 WASHC4Q2M389 1173 aa7.75□□□□□ -1.17
SMG1-217ENST00000569764 ANKRD13DQ6ZTN6 518 aa7.75□□□□□ -1.17
SMG1-217ENST00000569764 USP48Q86UV5 1035 aa7.75□□□□□ -1.17
SMG1-217ENST00000569764 ITFG2Q969R8 447 aa7.75□□□□□ -1.17
SMG1-217ENST00000569764 BACH2Q9BYV9 841 aa7.75□□□□□ -1.17
SMG1-217ENST00000569764 ALDH8A1Q9H2A2 487 aaPredicted RBP7.75□□□□□ -1.17
SMG1-217ENST00000569764 CAPN10Q9HC96 672 aa7.75□□□□□ -1.17
SMG1-217ENST00000569764 CD248Q9HCU0 757 aa7.75□□□□□ -1.17
SMG1-217ENST00000569764 NOL7Q9UMY1 257 aaKnown RBP7.75□□□□□ -1.17
SMG1-217ENST00000569764 BCL9LQ86UU0 1499 aa7.75□□□□□ -1.17
SMG1-217ENST00000569764 VIRMAQ69YN4 1812 aaKnown RBP7.75□□□□□ -1.17
SMG1-217ENST00000569764 PPEF1O14829 653 aaPredicted RBP7.75□□□□□ -1.17
SMG1-217ENST00000569764 KCNA2P16389 499 aa7.75□□□□□ -1.17
SMG1-217ENST00000569764 NYAP1Q6ZVC0 841 aa7.75□□□□□ -1.17
SMG1-217ENST00000569764 COL23A1Q86Y22 540 aaPredicted RBP7.75□□□□□ -1.17
SMG1-217ENST00000569764 LRRFIP2Q9Y608 721 aaKnown RBP7.75□□□□□ -1.17
SMG1-217ENST00000569764 PXDNQ92626 1479 aa7.75□□□□□ -1.17
SMG1-217ENST00000569764 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.74□□□□□ -1.17
SMG1-217ENST00000569764 TPM3P06753 285 aa7.74□□□□□ -1.17
SMG1-217ENST00000569764 TRIM29Q14134 588 aa7.74□□□□□ -1.17
SMG1-217ENST00000569764 LCA5Q86VQ0 697 aa7.74□□□□□ -1.17
SMG1-217ENST00000569764 TSC1Q92574 1164 aa7.74□□□□□ -1.17
SMG1-217ENST00000569764 SENP7Q9BQF6 1050 aa7.74□□□□□ -1.17
SMG1-217ENST00000569764 YY1AP1Q9H869 796 aa7.74□□□□□ -1.17
SMG1-217ENST00000569764 USTQ9Y2C2 406 aa7.74□□□□□ -1.17
SMG1-217ENST00000569764 BAG3O95817 575 aa7.74□□□□□ -1.17
SMG1-217ENST00000569764 HLA-DOAP06340 250 aa7.74□□□□□ -1.17
SMG1-217ENST00000569764 DPEP1P16444 411 aa7.74□□□□□ -1.17
SMG1-217ENST00000569764 ATP2B1P20020 1258 aa7.74□□□□□ -1.17
SMG1-217ENST00000569764 INHBEP58166 350 aa7.74□□□□□ -1.17
SMG1-217ENST00000569764 PSMC1P62191 440 aaKnown RBP7.74□□□□□ -1.17
SMG1-217ENST00000569764 ALDH1L2Q3SY69 923 aa7.74□□□□□ -1.17
SMG1-217ENST00000569764 C8orf34Q49A92 452 aa7.74□□□□□ -1.17
SMG1-217ENST00000569764 MRPL50Q8N5N7 158 aaKnown RBP7.74□□□□□ -1.17
SMG1-217ENST00000569764 CEP63Q96MT8 703 aa7.74□□□□□ -1.17
SMG1-217ENST00000569764 MUC3BQ9H195 1237 aa7.74□□□□□ -1.17
SMG1-217ENST00000569764 VDRP11473 427 aa7.74□□□□□ -1.17
SMG1-217ENST00000569764 GPTP24298 496 aa7.74□□□□□ -1.17
SMG1-217ENST00000569764 UBXN2AP68543 259 aa7.74□□□□□ -1.17
SMG1-217ENST00000569764 HDLBPQ00341 1268 aaKnown RBP7.74□□□□□ -1.17
SMG1-217ENST00000569764 FKBP4Q02790 459 aaKnown RBP eCLIP7.74□□□□□ -1.17
SMG1-217ENST00000569764 TRAF1Q13077 416 aa7.74□□□□□ -1.17
SMG1-217ENST00000569764 MKRN4PQ13434 485 aaPredicted RBP7.74□□□□□ -1.17
SMG1-217ENST00000569764 MVPQ14764 893 aaKnown RBP7.74□□□□□ -1.17
SMG1-217ENST00000569764 SEPT2Q15019 361 aa7.74□□□□□ -1.17
SMG1-217ENST00000569764 CABP5Q9NP86 173 aa7.74□□□□□ -1.17
SMG1-217ENST00000569764 DISP2A7MBM2 1401 aa7.74□□□□□ -1.17
SMG1-217ENST00000569764 COL5A2P05997 1499 aaPredicted RBP7.74□□□□□ -1.17
SMG1-217ENST00000569764 TMEM88BA6NKF7 163 aa7.74□□□□□ -1.17
SMG1-217ENST00000569764 SEC24BO95487 1268 aa7.74□□□□□ -1.17
SMG1-217ENST00000569764 EIF5P55010 431 aaKnown RBP7.74□□□□□ -1.17
SMG1-217ENST00000569764 USP50Q70EL3 339 aaPredicted RBP7.74□□□□□ -1.17
SMG1-217ENST00000569764 RPUSD2Q8IZ73 545 aaKnown RBP7.74□□□□□ -1.17
SMG1-217ENST00000569764 CRAMP1Q96RY5 1269 aa7.74□□□□□ -1.17
SMG1-217ENST00000569764 ZBTB3Q9H5J0 574 aa7.74□□□□□ -1.17
SMG1-217ENST00000569764 PICK1Q9NRD5 415 aa7.74□□□□□ -1.17
SMG1-217ENST00000569764 IARSP41252 1262 aaKnown RBP7.73□□□□□ -1.17
SMG1-217ENST00000569764 SLC10A4Q96EP9 437 aa7.73□□□□□ -1.17
SMG1-217ENST00000569764 DDX56Q9NY93 547 aaKnown RBP7.73□□□□□ -1.17
SMG1-217ENST00000569764 SLC26A4O43511 780 aa7.73□□□□□ -1.17
SMG1-217ENST00000569764 TIMM44O43615 452 aa7.73□□□□□ -1.17
SMG1-217ENST00000569764 NBPF7P0C2Y1 421 aaPredicted RBP7.73□□□□□ -1.17
SMG1-217ENST00000569764 ABCD1P33897 745 aa7.73□□□□□ -1.17
SMG1-217ENST00000569764 MARSP56192 900 aaKnown RBP7.73□□□□□ -1.17
SMG1-217ENST00000569764 LARP1BQ659C4 914 aaKnown RBP7.73□□□□□ -1.17
SMG1-217ENST00000569764 ZSCAN25Q6NSZ9 544 aa7.73□□□□□ -1.17
SMG1-217ENST00000569764 CENPQQ7L2Z9 268 aaPredicted RBP7.73□□□□□ -1.17
SMG1-217ENST00000569764 ERC1Q8IUD2 1116 aa7.73□□□□□ -1.17
SMG1-217ENST00000569764 DZIP1LQ8IYY4 767 aaKnown RBP7.73□□□□□ -1.17
SMG1-217ENST00000569764 BORCS6Q96GS4 357 aa7.73□□□□□ -1.17
SMG1-217ENST00000569764 RABL2AQ9UBK7 228 aaPredicted RBP7.73□□□□□ -1.17
SMG1-217ENST00000569764 TTF2Q9UNY4 1162 aaKnown RBP7.73□□□□□ -1.17
SMG1-217ENST00000569764 SCINQ9Y6U3 715 aa7.73□□□□□ -1.17
SMG1-217ENST00000569764 ALS2Q96Q42 1657 aa7.73□□□□□ -1.17
SMG1-217ENST00000569764 CHL1O00533 1208 aa7.73□□□□□ -1.17
SMG1-217ENST00000569764 SERPINB4P48594 390 aa7.73□□□□□ -1.17
SMG1-217ENST00000569764 CCDC158Q5M9N0 1113 aa7.73□□□□□ -1.17
SMG1-217ENST00000569764 TRIML1Q8N9V2 468 aa7.73□□□□□ -1.17
SMG1-217ENST00000569764 AGBL1Q96MI9 1066 aa7.73□□□□□ -1.17
SMG1-217ENST00000569764 SRCIN1Q9C0H9 1055 aa7.73□□□□□ -1.17
SMG1-217ENST00000569764 ADARB2Q9NS39 739 aaKnown RBP7.73□□□□□ -1.17
SMG1-217ENST00000569764 ASAP1Q9ULH1 1129 aa7.73□□□□□ -1.17
SMG1-217ENST00000569764 LRRC37A3O60309 1634 aa7.73□□□□□ -1.17
SMG1-217ENST00000569764 ABCC6O95255 1503 aa7.72□□□□□ -1.17
SMG1-217ENST00000569764 FKBP1BP68106 108 aa7.72□□□□□ -1.17
SMG1-217ENST00000569764 SNX32Q86XE0 403 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms