RNA–Protein interactions for RNA: ENST00000569357.4

TCF4-243, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-243ENST00000569357 PDHXO00330 501 aa11.67□□□□□ -0.54
TCF4-243ENST00000569357 DDX58O95786 925 aaKnown RBP11.67□□□□□ -0.54
TCF4-243ENST00000569357 ELNP15502 786 aa11.67□□□□□ -0.54
TCF4-243ENST00000569357 ITGA6P23229 1130 aa11.67□□□□□ -0.54
TCF4-243ENST00000569357 FCGRTP55899 365 aa11.67□□□□□ -0.54
TCF4-243ENST00000569357 ZNF804AQ7Z570 1209 aa11.67□□□□□ -0.54
TCF4-243ENST00000569357 TDHQ8IZJ6 230 aa11.67□□□□□ -0.54
TCF4-243ENST00000569357 CCER1Q8TC90 406 aaPredicted RBP11.67□□□□□ -0.54
TCF4-243ENST00000569357 TEPSINQ96N21 525 aa11.67□□□□□ -0.54
TCF4-243ENST00000569357 WRNIP1Q96S55 665 aa11.67□□□□□ -0.54
TCF4-243ENST00000569357 PRDM6Q9NQX0 595 aa11.67□□□□□ -0.54
TCF4-243ENST00000569357 TTF2Q9UNY4 1162 aaKnown RBP11.67□□□□□ -0.54
TCF4-243ENST00000569357 MAP3K2Q9Y2U5 619 aa11.67□□□□□ -0.54
TCF4-243ENST00000569357 SNCAIPQ9Y6H5 919 aa11.67□□□□□ -0.54
TCF4-243ENST00000569357 IRS2Q9Y4H2 1338 aa11.66□□□□□ -0.54
TCF4-243ENST00000569357 ADCY3O60266 1144 aa11.66□□□□□ -0.54
TCF4-243ENST00000569357 INHAP05111 366 aa11.66□□□□□ -0.54
TCF4-243ENST00000569357 IRX5P78411 483 aaPredicted RBP11.66□□□□□ -0.54
TCF4-243ENST00000569357 LRIT3Q3SXY7 679 aa11.66□□□□□ -0.54
TCF4-243ENST00000569357 NECAB2Q7Z6G3 386 aa11.66□□□□□ -0.54
TCF4-243ENST00000569357 CCDC146Q8IYE0 955 aa11.66□□□□□ -0.54
TCF4-243ENST00000569357 DIS3LQ8TF46 1054 aaKnown RBP11.66□□□□□ -0.54
TCF4-243ENST00000569357 MARVELD3Q96A59 401 aa11.66□□□□□ -0.54
TCF4-243ENST00000569357 FAM161BQ96MY7 647 aa11.66□□□□□ -0.54
TCF4-243ENST00000569357 UBE2OQ9C0C9 1292 aaKnown RBP11.66□□□□□ -0.54
TCF4-243ENST00000569357 GABRQQ9UN88 632 aa11.66□□□□□ -0.54
TCF4-243ENST00000569357 A0A0C4DFX4 3053 aa11.66□□□□□ -0.54
TCF4-243ENST00000569357 CUL9Q8IWT3 2517 aa11.66□□□□□ -0.54
TCF4-243ENST00000569357 OTOFQ9HC10 1997 aa11.66□□□□□ -0.54
TCF4-243ENST00000569357 RANBP2P49792 3224 aaKnown RBP11.65□□□□□ -0.54
TCF4-243ENST00000569357 SPEF2Q9C093 1822 aa11.65□□□□□ -0.54
TCF4-243ENST00000569357 RPTORQ8N122 1335 aa11.65□□□□□ -0.54
TCF4-243ENST00000569357 MAGEA10P43363 369 aaPredicted RBP11.65□□□□□ -0.54
TCF4-243ENST00000569357 NUBP1P53384 320 aa11.65□□□□□ -0.54
TCF4-243ENST00000569357 PPIL2Q13356 520 aa11.65□□□□□ -0.54
TCF4-243ENST00000569357 UBE3BQ7Z3V4 1068 aa11.65□□□□□ -0.54
TCF4-243ENST00000569357 DZIP1LQ8IYY4 767 aaKnown RBP11.65□□□□□ -0.54
TCF4-243ENST00000569357 IL1R1P14778 569 aa11.64□□□□□ -0.55
TCF4-243ENST00000569357 FLT3LGP49771 235 aa11.64□□□□□ -0.55
TCF4-243ENST00000569357 CACNB3P54284 484 aa11.64□□□□□ -0.55
TCF4-243ENST00000569357 FKBP1AP62942 108 aaKnown RBP11.64□□□□□ -0.55
TCF4-243ENST00000569357 NEXNQ0ZGT2 675 aa11.64□□□□□ -0.55
TCF4-243ENST00000569357 CWF19L2Q2TBE0 894 aaKnown RBP11.64□□□□□ -0.55
TCF4-243ENST00000569357 MFSD14BQ5SR56 506 aa11.64□□□□□ -0.55
TCF4-243ENST00000569357 ANKRD23Q86SG2 305 aa11.64□□□□□ -0.55
TCF4-243ENST00000569357 PLIN1O60240 522 aa11.63□□□□□ -0.55
TCF4-243ENST00000569357 IGKV5-2P06315 115 aa11.63□□□□□ -0.55
TCF4-243ENST00000569357 CYP2C8P10632 490 aa11.63□□□□□ -0.55
TCF4-243ENST00000569357 COL9A1P20849 921 aa11.63□□□□□ -0.55
TCF4-243ENST00000569357 MIGA2Q7L4E1 593 aa11.63□□□□□ -0.55
TCF4-243ENST00000569357 PARK7Q99497 189 aaKnown RBP11.63□□□□□ -0.55
TCF4-243ENST00000569357 MBIPQ9NS73 344 aa11.63□□□□□ -0.55
TCF4-243ENST00000569357 SERPINA10Q9UK55 444 aa11.63□□□□□ -0.55
TCF4-243ENST00000569357 ECM29Q5VYK3 1845 aa11.63□□□□□ -0.55
TCF4-243ENST00000569357 PI4KAP2A4QPH2 592 aa11.62□□□□□ -0.55
TCF4-243ENST00000569357 TNPO2O14787 897 aaKnown RBP11.62□□□□□ -0.55
TCF4-243ENST00000569357 CRKP46108 304 aa11.62□□□□□ -0.55
TCF4-243ENST00000569357 PPATQ06203 517 aa11.62□□□□□ -0.55
TCF4-243ENST00000569357 PLCD3Q8N3E9 789 aa11.62□□□□□ -0.55
TCF4-243ENST00000569357 PI4KAP1Q8N8J0 262 aa11.62□□□□□ -0.55
TCF4-243ENST00000569357 GUCD1Q96NT3 240 aa11.62□□□□□ -0.55
TCF4-243ENST00000569357 TMOD2Q9NZR1 351 aa11.62□□□□□ -0.55
TCF4-243ENST00000569357 CHMP3Q9Y3E7 222 aa11.62□□□□□ -0.55
TCF4-243ENST00000569357 ADGRA2Q96PE1 1338 aa11.61□□□□□ -0.55
TCF4-243ENST00000569357 ANKRD18BA2A2Z9 1011 aa11.61□□□□□ -0.55
TCF4-243ENST00000569357 CAPN2P17655 700 aa11.61□□□□□ -0.55
TCF4-243ENST00000569357 INPP5BP32019 993 aa11.61□□□□□ -0.55
TCF4-243ENST00000569357 DCAF15Q66K64 600 aa11.61□□□□□ -0.55
TCF4-243ENST00000569357 KSR2Q6VAB6 950 aa11.61□□□□□ -0.55
TCF4-243ENST00000569357 C15orf52Q6ZUT6 534 aaKnown RBP11.61□□□□□ -0.55
TCF4-243ENST00000569357 NBPF3Q9H094 633 aa11.61□□□□□ -0.55
TCF4-243ENST00000569357 CRISPLD2Q9H0B8 497 aa11.61□□□□□ -0.55
TCF4-243ENST00000569357 PAK6Q9NQU5 681 aaPredicted RBP11.61□□□□□ -0.55
TCF4-243ENST00000569357 NEURL1BA8MQ27 555 aa11.6□□□□□ -0.55
TCF4-243ENST00000569357 BCRP11274 1271 aa11.6□□□□□ -0.55
TCF4-243ENST00000569357 MDM2Q00987 491 aaPredicted RBP11.6□□□□□ -0.55
TCF4-243ENST00000569357 PXYLP1Q8TE99 480 aa11.6□□□□□ -0.55
TCF4-243ENST00000569357 HOOK2Q96ED9 719 aa11.6□□□□□ -0.55
TCF4-243ENST00000569357 ZNF341Q9BYN7 854 aa11.6□□□□□ -0.55
TCF4-243ENST00000569357 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.6□□□□□ -0.55
TCF4-243ENST00000569357 H7C1W4 665 aa11.59□□□□□ -0.55
TCF4-243ENST00000569357 ZNF697Q5TEC3 545 aa11.59□□□□□ -0.55
TCF4-243ENST00000569357 TMEM121BQ9BXQ6 578 aaPredicted RBP11.59□□□□□ -0.55
TCF4-243ENST00000569357 C11orf49Q9H6J7 331 aa11.59□□□□□ -0.55
TCF4-243ENST00000569357 RAPGEFL1Q9UHV5 662 aa11.59□□□□□ -0.55
TCF4-243ENST00000569357 GYG1P46976 350 aa11.58□□□□□ -0.56
TCF4-243ENST00000569357 CHAF1AQ13111 956 aaPredicted RBP11.58□□□□□ -0.56
TCF4-243ENST00000569357 IFIT5Q13325 482 aaKnown RBP11.58□□□□□ -0.56
TCF4-243ENST00000569357 CCDC30Q5VVM6 783 aa11.58□□□□□ -0.56
TCF4-243ENST00000569357 ANKLE1Q8NAG6 615 aa11.58□□□□□ -0.56
TCF4-243ENST00000569357 SMCR8Q8TEV9 937 aaPredicted RBP11.58□□□□□ -0.56
TCF4-243ENST00000569357 COA7Q96BR5 231 aa11.58□□□□□ -0.56
TCF4-243ENST00000569357 IQSEC3Q9UPP2 1182 aaPredicted RBP11.58□□□□□ -0.56
TCF4-243ENST00000569357 LAMA3Q16787 3333 aa11.58□□□□□ -0.56
TCF4-243ENST00000569357 FAM205AQ6ZU69 1335 aa11.58□□□□□ -0.56
TCF4-243ENST00000569357 CSF1RP07333 972 aa11.57□□□□□ -0.56
TCF4-243ENST00000569357 HIBADHP31937 336 aaKnown RBP11.57□□□□□ -0.56
TCF4-243ENST00000569357 IRF5Q13568 498 aa11.57□□□□□ -0.56
TCF4-243ENST00000569357 MOGSQ13724 837 aa11.57□□□□□ -0.56
TCF4-243ENST00000569357 GRIK5Q16478 980 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms