RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 HVCN1Q96D96 273 aa7.95□□□□□ -1.14
CNOT1-216ENST00000569240 KDM5DQ9BY66 1539 aa7.95□□□□□ -1.14
CNOT1-216ENST00000569240 FAM135AQ9P2D6 1515 aa7.95□□□□□ -1.14
CNOT1-216ENST00000569240 ZNF213O14771 459 aa7.95□□□□□ -1.14
CNOT1-216ENST00000569240 CFAP157Q5JU67 520 aa7.95□□□□□ -1.14
CNOT1-216ENST00000569240 ST13P4Q8IZP2 240 aaPredicted RBP7.95□□□□□ -1.14
CNOT1-216ENST00000569240 BRF1Q92994 677 aa7.95□□□□□ -1.14
CNOT1-216ENST00000569240 ANGPTL2Q9UKU9 493 aa7.95□□□□□ -1.14
CNOT1-216ENST00000569240 AFAP1L2Q8N4X5 818 aa7.95□□□□□ -1.14
CNOT1-216ENST00000569240 GGNBP2Q9H3C7 697 aa7.95□□□□□ -1.14
CNOT1-216ENST00000569240 SCINQ9Y6U3 715 aa7.95□□□□□ -1.14
CNOT1-216ENST00000569240 A0A1W2PQ27 194 aa7.95□□□□□ -1.14
CNOT1-216ENST00000569240 A0A1W2PQ64 194 aa7.95□□□□□ -1.14
CNOT1-216ENST00000569240 A0A1W2PQD8 194 aa7.95□□□□□ -1.14
CNOT1-216ENST00000569240 MATR3P43243 847 aaKnown RBP eCLIP7.95□□□□□ -1.14
CNOT1-216ENST00000569240 ESRRGP62508 458 aa7.95□□□□□ -1.14
CNOT1-216ENST00000569240 ANKRD20A3Q5VUR7 823 aa7.95□□□□□ -1.14
CNOT1-216ENST00000569240 DDX23Q9BUQ8 820 aaKnown RBP7.95□□□□□ -1.14
CNOT1-216ENST00000569240 FAM204AQ9H8W3 233 aa7.95□□□□□ -1.14
CNOT1-216ENST00000569240 LZTFL1Q9NQ48 299 aa7.95□□□□□ -1.14
CNOT1-216ENST00000569240 SOX12O15370 315 aa7.95□□□□□ -1.14
CNOT1-216ENST00000569240 TRIM42Q8IWZ5 723 aa7.95□□□□□ -1.14
CNOT1-216ENST00000569240 KRT23Q9C075 422 aa7.95□□□□□ -1.14
CNOT1-216ENST00000569240 MIS18AQ9NYP9 233 aa7.95□□□□□ -1.14
CNOT1-216ENST00000569240 FAM135BQ49AJ0 1406 aa7.94□□□□□ -1.14
CNOT1-216ENST00000569240 TRIM75PA6NK02 468 aa7.94□□□□□ -1.14
CNOT1-216ENST00000569240 SEL1L2Q5TEA6 688 aa7.94□□□□□ -1.14
CNOT1-216ENST00000569240 RUFY3Q7L099 469 aa7.94□□□□□ -1.14
CNOT1-216ENST00000569240 SPZ1Q9BXG8 430 aa7.94□□□□□ -1.14
CNOT1-216ENST00000569240 TMX1Q9H3N1 280 aa7.94□□□□□ -1.14
CNOT1-216ENST00000569240 RASSF10A6NK89 507 aa7.94□□□□□ -1.14
CNOT1-216ENST00000569240 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.94□□□□□ -1.14
CNOT1-216ENST00000569240 TTC21BQ7Z4L5 1316 aa7.94□□□□□ -1.14
CNOT1-216ENST00000569240 BIN1O00499 593 aa7.94□□□□□ -1.14
CNOT1-216ENST00000569240 MGEA5O60502 916 aa7.94□□□□□ -1.14
CNOT1-216ENST00000569240 HSPA6P17066 643 aa7.94□□□□□ -1.14
CNOT1-216ENST00000569240 ATP8B2P98198 1209 aa7.94□□□□□ -1.14
CNOT1-216ENST00000569240 CCDC14Q49A88 953 aa7.94□□□□□ -1.14
CNOT1-216ENST00000569240 RETREG2Q8NC44 543 aa7.94□□□□□ -1.14
CNOT1-216ENST00000569240 EXOC6BQ9Y2D4 811 aa7.94□□□□□ -1.14
CNOT1-216ENST00000569240 ARHGAP10A1A4S6 786 aa7.94□□□□□ -1.14
CNOT1-216ENST00000569240 E7ENQ6 273 aa7.94□□□□□ -1.14
CNOT1-216ENST00000569240 CTNNA2P26232 953 aa7.94□□□□□ -1.14
CNOT1-216ENST00000569240 UBLCP1Q8WVY7 318 aaPredicted RBP7.94□□□□□ -1.14
CNOT1-216ENST00000569240 ANKRD7Q92527 254 aa7.94□□□□□ -1.14
CNOT1-216ENST00000569240 NDUFA13Q9P0J0 144 aa7.94□□□□□ -1.14
CNOT1-216ENST00000569240 G3V3G9 751 aa7.94□□□□□ -1.14
CNOT1-216ENST00000569240 GCFC2P16383 781 aaKnown RBP7.94□□□□□ -1.14
CNOT1-216ENST00000569240 LMNB1P20700 586 aa7.94□□□□□ -1.14
CNOT1-216ENST00000569240 TNIP1Q15025 636 aa7.94□□□□□ -1.14
CNOT1-216ENST00000569240 DCAF8Q5TAQ9 597 aa7.94□□□□□ -1.14
CNOT1-216ENST00000569240 PPP1R21Q6ZMI0 780 aa7.94□□□□□ -1.14
CNOT1-216ENST00000569240 RAPGEF4Q8WZA2 1011 aa7.94□□□□□ -1.14
CNOT1-216ENST00000569240 EHMT1Q9H9B1 1298 aa7.94□□□□□ -1.14
CNOT1-216ENST00000569240 RGS12O14924 1447 aa7.94□□□□□ -1.14
CNOT1-216ENST00000569240 METAP2P50579 478 aaKnown RBP eCLIP7.94□□□□□ -1.143e-6■□□□□ 10.8
CNOT1-216ENST00000569240 SLC8A3P57103 927 aa7.94□□□□□ -1.14
CNOT1-216ENST00000569240 BIRC3Q13489 604 aa7.94□□□□□ -1.14
CNOT1-216ENST00000569240 CATIPQ7Z7H3 387 aa7.94□□□□□ -1.14
CNOT1-216ENST00000569240 CALR3Q96L12 384 aaKnown RBP7.94□□□□□ -1.14
CNOT1-216ENST00000569240 HAUS8Q9BT25 410 aa7.94□□□□□ -1.14
CNOT1-216ENST00000569240 SLC52A1Q9NWF4 448 aa7.94□□□□□ -1.14
CNOT1-216ENST00000569240 BABAM1Q9NWV8 329 aa7.94□□□□□ -1.14
CNOT1-216ENST00000569240 STOML1Q9UBI4 398 aa7.94□□□□□ -1.14
CNOT1-216ENST00000569240 SUFUQ9UMX1 484 aa7.94□□□□□ -1.14
CNOT1-216ENST00000569240 PPP2R2CQ9Y2T4 447 aa7.94□□□□□ -1.14
CNOT1-216ENST00000569240 CCT5P48643 541 aa7.93□□□□□ -1.14
CNOT1-216ENST00000569240 VTI1AQ96AJ9 217 aa7.93□□□□□ -1.14
CNOT1-216ENST00000569240 ADAM21Q9UKJ8 722 aa7.93□□□□□ -1.14
CNOT1-216ENST00000569240 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.93□□□□□ -1.14
CNOT1-216ENST00000569240 SSBP05455 408 aaKnown RBP eCLIP7.93□□□□□ -1.14
CNOT1-216ENST00000569240 HMOX1P09601 288 aa7.93□□□□□ -1.14
CNOT1-216ENST00000569240 ELF1P32519 619 aa7.93□□□□□ -1.14
CNOT1-216ENST00000569240 MAN1A1P33908 653 aa7.93□□□□□ -1.14
CNOT1-216ENST00000569240 BIRC2Q13490 618 aa7.93□□□□□ -1.14
CNOT1-216ENST00000569240 TTC19Q6DKK2 380 aaPredicted RBP7.93□□□□□ -1.14
CNOT1-216ENST00000569240 UBL4BQ8N7F7 174 aa7.93□□□□□ -1.14
CNOT1-216ENST00000569240 AIDAQ96BJ3 306 aa7.93□□□□□ -1.14
CNOT1-216ENST00000569240 NCBP1Q09161 790 aaKnown RBP7.93□□□□□ -1.14
CNOT1-216ENST00000569240 CUL3Q13618 768 aa7.93□□□□□ -1.14
CNOT1-216ENST00000569240 CAPRIN2Q6IMN6 1127 aaKnown RBP7.93□□□□□ -1.14
CNOT1-216ENST00000569240 PLEKHM2Q8IWE5 1019 aa7.93□□□□□ -1.14
CNOT1-216ENST00000569240 ERMNQ8TAM6 284 aa7.93□□□□□ -1.14
CNOT1-216ENST00000569240 JPH2Q9BR39 696 aaPredicted RBP7.93□□□□□ -1.14
CNOT1-216ENST00000569240 TMEM232C9JQI7 657 aa7.93□□□□□ -1.14
CNOT1-216ENST00000569240 ZSCAN20P17040 1043 aaPredicted RBP7.93□□□□□ -1.14
CNOT1-216ENST00000569240 CLCN6P51797 869 aa7.93□□□□□ -1.14
CNOT1-216ENST00000569240 MRPS25P82663 173 aaKnown RBP7.93□□□□□ -1.14
CNOT1-216ENST00000569240 KARSQ15046 597 aaKnown RBP7.93□□□□□ -1.14
CNOT1-216ENST00000569240 DENND2CQ68D51 928 aa7.93□□□□□ -1.14
CNOT1-216ENST00000569240 IFT81Q8WYA0 676 aa7.93□□□□□ -1.14
CNOT1-216ENST00000569240 MINK1Q8N4C8 1332 aaPredicted RBP7.93□□□□□ -1.14
CNOT1-216ENST00000569240 KRT71Q3SY84 523 aa7.93□□□□□ -1.14
CNOT1-216ENST00000569240 ENAHQ8N8S7 591 aaPredicted RBP7.93□□□□□ -1.14
CNOT1-216ENST00000569240 ARHGEF2Q92974 986 aaKnown RBP7.93□□□□□ -1.14
CNOT1-216ENST00000569240 HOOK2Q96ED9 719 aa7.93□□□□□ -1.14
CNOT1-216ENST00000569240 SYNCQ9H7C4 482 aa7.93□□□□□ -1.14
CNOT1-216ENST00000569240 PDE11AQ9HCR9 933 aa7.93□□□□□ -1.14
CNOT1-216ENST00000569240 TYW1Q9NV66 732 aaKnown RBP7.93□□□□□ -1.14
CNOT1-216ENST00000569240 SEC63Q9UGP8 760 aaKnown RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms