RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 CHRDQ9H2X0 955 aa10.76□□□□□ -0.69
CDH11-216ENST00000569128 PANK3Q9H999 370 aa10.76□□□□□ -0.69
CDH11-216ENST00000569128 ADGRB2O60241 1585 aa10.76□□□□□ -0.69
CDH11-216ENST00000569128 LTBP4Q8N2S1 1624 aa10.76□□□□□ -0.69
CDH11-216ENST00000569128 H3BM21 787 aa10.75□□□□□ -0.69
CDH11-216ENST00000569128 EREGO14944 169 aa10.75□□□□□ -0.69
CDH11-216ENST00000569128 PRPF40AO75400 957 aaKnown RBP10.75□□□□□ -0.69
CDH11-216ENST00000569128 CYP2E1P05181 493 aaPredicted RBP10.75□□□□□ -0.69
CDH11-216ENST00000569128 GPR161Q8N6U8 529 aaKnown RBP10.75□□□□□ -0.69
CDH11-216ENST00000569128 DUSP9Q99956 384 aaKnown RBP10.75□□□□□ -0.69
CDH11-216ENST00000569128 C19orf44Q9H6X5 657 aa10.75□□□□□ -0.69
CDH11-216ENST00000569128 RNF19AQ9NV58 838 aa10.75□□□□□ -0.69
CDH11-216ENST00000569128 PRR12Q9ULL5 1215 aa10.75□□□□□ -0.69
CDH11-216ENST00000569128 USP32Q8NFA0 1604 aa10.74□□□□□ -0.69
CDH11-216ENST00000569128 MYOM1P52179 1685 aa10.74□□□□□ -0.69
CDH11-216ENST00000569128 C2CD2LO14523 706 aa10.74□□□□□ -0.69
CDH11-216ENST00000569128 POLR3DP05423 398 aaPredicted RBP10.74□□□□□ -0.69
CDH11-216ENST00000569128 GAS6Q14393 721 aa10.74□□□□□ -0.69
CDH11-216ENST00000569128 SF3A1Q15459 793 aaKnown RBP10.74□□□□□ -0.69
CDH11-216ENST00000569128 DIEXFQ68CQ4 756 aaKnown RBP10.74□□□□□ -0.69
CDH11-216ENST00000569128 ALG1LQ6GMV1 187 aa10.74□□□□□ -0.69
CDH11-216ENST00000569128 ATP7BP35670 1465 aa10.74□□□□□ -0.69
CDH11-216ENST00000569128 RGPD8O14715 1765 aaPredicted RBP10.73□□□□□ -0.69
CDH11-216ENST00000569128 BMP4P12644 408 aa10.73□□□□□ -0.69
CDH11-216ENST00000569128 CES1P23141 567 aa10.73□□□□□ -0.69
CDH11-216ENST00000569128 CNGB1Q14028 1251 aaPredicted RBP10.73□□□□□ -0.69
CDH11-216ENST00000569128 NPAS3Q8IXF0 933 aa10.73□□□□□ -0.69
CDH11-216ENST00000569128 PMFBP1Q8TBY8 1022 aa10.73□□□□□ -0.69
CDH11-216ENST00000569128 UBXN4Q92575 508 aa10.73□□□□□ -0.69
CDH11-216ENST00000569128 KANSL3Q9P2N6 904 aa10.73□□□□□ -0.69
CDH11-216ENST00000569128 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.73□□□□□ -0.69
CDH11-216ENST00000569128 FMN2Q9NZ56 1722 aa10.72□□□□□ -0.69
CDH11-216ENST00000569128 ATF3P18847 181 aa10.72□□□□□ -0.69
CDH11-216ENST00000569128 MX2P20592 715 aa10.72□□□□□ -0.69
CDH11-216ENST00000569128 NAALADL2Q58DX5 795 aa10.72□□□□□ -0.69
CDH11-216ENST00000569128 OR13H1Q8NG92 308 aa10.72□□□□□ -0.69
CDH11-216ENST00000569128 CCDC74AQ96AQ1 378 aa10.72□□□□□ -0.69
CDH11-216ENST00000569128 ORAI2Q96SN7 254 aa10.72□□□□□ -0.69
CDH11-216ENST00000569128 EFCC1Q9HA90 598 aa10.72□□□□□ -0.69
CDH11-216ENST00000569128 TLR7Q9NYK1 1049 aaKnown RBP10.72□□□□□ -0.69
CDH11-216ENST00000569128 PARP2Q9UGN5 583 aa10.72□□□□□ -0.69
CDH11-216ENST00000569128 PPIP5K1Q6PFW1 1433 aa10.72□□□□□ -0.69
CDH11-216ENST00000569128 NCOA3Q9Y6Q9 1424 aa10.72□□□□□ -0.69
CDH11-216ENST00000569128 CDC42BPGQ6DT37 1551 aa10.72□□□□□ -0.69
CDH11-216ENST00000569128 TERTO14746 1132 aaKnown RBP10.71□□□□□ -0.69
CDH11-216ENST00000569128 MAP3K6O95382 1288 aa10.71□□□□□ -0.69
CDH11-216ENST00000569128 PSAPP07602 524 aa10.71□□□□□ -0.69
CDH11-216ENST00000569128 MSH6P52701 1360 aa10.71□□□□□ -0.69
CDH11-216ENST00000569128 FGD1P98174 961 aa10.71□□□□□ -0.69
CDH11-216ENST00000569128 XPCQ01831 940 aaPredicted RBP10.71□□□□□ -0.69
CDH11-216ENST00000569128 FAM161BQ96MY7 647 aa10.71□□□□□ -0.69
CDH11-216ENST00000569128 CD163L1Q9NR16 1453 aa10.71□□□□□ -0.69
CDH11-216ENST00000569128 ACEP12821 1306 aa10.7□□□□□ -0.7
CDH11-216ENST00000569128 PHF20L1A8MW92 1017 aa10.7□□□□□ -0.7
CDH11-216ENST00000569128 IRS1P35568 1242 aa10.7□□□□□ -0.7
CDH11-216ENST00000569128 DHX32Q7L7V1 743 aaKnown RBP10.7□□□□□ -0.7
CDH11-216ENST00000569128 SYT9Q86SS6 491 aa10.7□□□□□ -0.7
CDH11-216ENST00000569128 EPS8L3Q8TE67 593 aaKnown RBP10.7□□□□□ -0.7
CDH11-216ENST00000569128 FBF1Q8TES7 1133 aa10.7□□□□□ -0.7
CDH11-216ENST00000569128 PMEPA1Q969W9 287 aa10.7□□□□□ -0.7
CDH11-216ENST00000569128 IGFLR1Q9H665 355 aa10.7□□□□□ -0.7
CDH11-216ENST00000569128 C1orf167Q5SNV9 1468 aa10.69□□□□□ -0.7
CDH11-216ENST00000569128 MST1RQ04912 1400 aa10.69□□□□□ -0.7
CDH11-216ENST00000569128 A0A1W2PP64 1363 aa10.69□□□□□ -0.7
CDH11-216ENST00000569128 PCBP4P57723 403 aaKnown RBP10.69□□□□□ -0.7
CDH11-216ENST00000569128 TBC1D8BQ0IIM8 1120 aa10.69□□□□□ -0.7
CDH11-216ENST00000569128 TSNAXIP1Q2TAA8 658 aa10.69□□□□□ -0.7
CDH11-216ENST00000569128 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.69□□□□□ -0.7
CDH11-216ENST00000569128 ZNF468Q5VIY5 522 aaPredicted RBP10.69□□□□□ -0.7
CDH11-216ENST00000569128 PI16Q6UXB8 463 aa10.69□□□□□ -0.7
CDH11-216ENST00000569128 NPHS2Q9NP85 383 aa10.69□□□□□ -0.7
CDH11-216ENST00000569128 ANKARQ7Z5J8 1434 aa10.68□□□□□ -0.7
CDH11-216ENST00000569128 ERBB4Q15303 1308 aa10.68□□□□□ -0.7
CDH11-216ENST00000569128 VSIG8P0DPA2 414 aa10.68□□□□□ -0.7
CDH11-216ENST00000569128 PLAURQ03405 335 aa10.68□□□□□ -0.7
CDH11-216ENST00000569128 COL13A1Q5TAT6 717 aaPredicted RBP10.68□□□□□ -0.7
CDH11-216ENST00000569128 GALNT12Q8IXK2 581 aa10.68□□□□□ -0.7
CDH11-216ENST00000569128 SLC16A10Q8TF71 515 aa10.68□□□□□ -0.7
CDH11-216ENST00000569128 DDX17Q92841 729 aaKnown RBP10.68□□□□□ -0.7
CDH11-216ENST00000569128 SPATA32Q96LK8 384 aa10.68□□□□□ -0.7
CDH11-216ENST00000569128 NSUN5Q96P11 429 aaKnown RBP10.68□□□□□ -0.7
CDH11-216ENST00000569128 COL25A1Q9BXS0 654 aaPredicted RBP10.68□□□□□ -0.7
CDH11-216ENST00000569128 TOPAZ1Q8N9V7 1692 aa10.68□□□□□ -0.7
CDH11-216ENST00000569128 NSD3Q9BZ95 1437 aa10.67□□□□□ -0.7
CDH11-216ENST00000569128 ANKRD36BQ8N2N9 1353 aa10.67□□□□□ -0.7
CDH11-216ENST00000569128 MLLT1Q03111 559 aaPredicted RBP10.67□□□□□ -0.7
CDH11-216ENST00000569128 PSMD2Q13200 908 aa10.67□□□□□ -0.7
CDH11-216ENST00000569128 RNFT1Q5M7Z0 435 aa10.67□□□□□ -0.7
CDH11-216ENST00000569128 HDGFL2Q7Z4V5 671 aaPredicted RBP10.67□□□□□ -0.7
CDH11-216ENST00000569128 NGDNQ8NEJ9 315 aaKnown RBP10.67□□□□□ -0.7
CDH11-216ENST00000569128 MBIPQ9NS73 344 aa10.67□□□□□ -0.7
CDH11-216ENST00000569128 TERF2IPQ9NYB0 399 aa10.67□□□□□ -0.7
CDH11-216ENST00000569128 DCCP43146 1447 aa10.67□□□□□ -0.7
CDH11-216ENST00000569128 CPSF1Q10570 1443 aaKnown RBP10.67□□□□□ -0.7
CDH11-216ENST00000569128 NINLQ9Y2I6 1382 aa10.66□□□□□ -0.7
CDH11-216ENST00000569128 SOX18P35713 384 aa10.66□□□□□ -0.7
CDH11-216ENST00000569128 CC2D1BQ5T0F9 858 aaKnown RBP10.66□□□□□ -0.7
CDH11-216ENST00000569128 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.66□□□□□ -0.7
CDH11-216ENST00000569128 LATS2Q9NRM7 1088 aa10.66□□□□□ -0.7
CDH11-216ENST00000569128 NLRP2Q9NX02 1062 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms