RNA–Protein interactions for RNA: ENST00000568691.5

VPS9D1-207, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-207ENST00000568691 MPHOSPH8Q99549 860 aa15.14■□□□□ 0.01
VPS9D1-207ENST00000568691 TTF2Q9UNY4 1162 aaKnown RBP15.14■□□□□ 0.01
VPS9D1-207ENST00000568691 MUC3AQ02505 3323 aa15.14■□□□□ 0.01
VPS9D1-207ENST00000568691 INHAP05111 366 aa15.13■□□□□ 0.01
VPS9D1-207ENST00000568691 INPP5BP32019 993 aa15.13■□□□□ 0.01
VPS9D1-207ENST00000568691 MAGEA10P43363 369 aaPredicted RBP15.13■□□□□ 0.01
VPS9D1-207ENST00000568691 CRKP46108 304 aa15.13■□□□□ 0.01
VPS9D1-207ENST00000568691 CCDC27Q2M243 656 aa15.13■□□□□ 0.01
VPS9D1-207ENST00000568691 MFSD14BQ5SR56 506 aa15.13■□□□□ 0.01
VPS9D1-207ENST00000568691 ZNF804AQ7Z570 1209 aa15.13■□□□□ 0.01
VPS9D1-207ENST00000568691 C7orf61Q8IZ16 206 aa15.13■□□□□ 0.01
VPS9D1-207ENST00000568691 TSPYL6Q8N831 410 aa15.13■□□□□ 0.01
VPS9D1-207ENST00000568691 TDRD7Q8NHU6 1098 aaKnown RBP15.13■□□□□ 0.01
VPS9D1-207ENST00000568691 KCNH4Q9UQ05 1017 aa15.13■□□□□ 0.01
VPS9D1-207ENST00000568691 ADCY3O60266 1144 aa15.12■□□□□ 0.01
VPS9D1-207ENST00000568691 WDHD1O75717 1129 aaPredicted RBP15.12■□□□□ 0.01
VPS9D1-207ENST00000568691 TFRCP02786 760 aaKnown RBP15.12■□□□□ 0.01
VPS9D1-207ENST00000568691 CYP2C8P10632 490 aa15.12■□□□□ 0.01
VPS9D1-207ENST00000568691 SYN1P17600 705 aa15.12■□□□□ 0.01
VPS9D1-207ENST00000568691 G2E3Q7L622 706 aa15.12■□□□□ 0.01
VPS9D1-207ENST00000568691 PRDM6Q9NQX0 595 aa15.12■□□□□ 0.01
VPS9D1-207ENST00000568691 FLT3LGP49771 235 aa15.11■□□□□ 0.01
VPS9D1-207ENST00000568691 PPATQ06203 517 aa15.11■□□□□ 0.01
VPS9D1-207ENST00000568691 GCKRQ14397 625 aa15.11■□□□□ 0.01
VPS9D1-207ENST00000568691 TDHQ8IZJ6 230 aa15.11■□□□□ 0.01
VPS9D1-207ENST00000568691 POTEB2H3BUK9 544 aa15.1■□□□□ 0.01
VPS9D1-207ENST00000568691 APAF1O14727 1248 aa15.1■□□□□ 0.01
VPS9D1-207ENST00000568691 DDX58O95786 925 aaKnown RBP15.1■□□□□ 0.01
VPS9D1-207ENST00000568691 FCGRTP55899 365 aa15.1■□□□□ 0.01
VPS9D1-207ENST00000568691 FOXO4P98177 505 aa15.1■□□□□ 0.01
VPS9D1-207ENST00000568691 RPTORQ8N122 1335 aa15.1■□□□□ 0.01
VPS9D1-207ENST00000568691 GYG1P46976 350 aa15.09■□□□□ 0.01
VPS9D1-207ENST00000568691 MIGA2Q7L4E1 593 aa15.09■□□□□ 0.01
VPS9D1-207ENST00000568691 PXYLP1Q8TE99 480 aa15.09■□□□□ 0.01
VPS9D1-207ENST00000568691 FAM84BQ96KN1 310 aaPredicted RBP15.09■□□□□ 0.01
VPS9D1-207ENST00000568691 ZNF112Q9UJU3 913 aa15.09■□□□□ 0.01
VPS9D1-207ENST00000568691 MGAMO43451 1857 aa15.09■□□□□ 0.01
VPS9D1-207ENST00000568691 COL2A1P02458 1487 aaPredicted RBP15.08■□□□□ 0.01
VPS9D1-207ENST00000568691 TNNI2P48788 182 aa15.08■□□□□ 0
VPS9D1-207ENST00000568691 IRF5Q13568 498 aa15.08■□□□□ 0
VPS9D1-207ENST00000568691 APOBEC3HQ6NTF7 200 aaKnown RBP15.08■□□□□ 0
VPS9D1-207ENST00000568691 NECAB2Q7Z6G3 386 aa15.08■□□□□ 0
VPS9D1-207ENST00000568691 ZNF594Q96JF6 807 aaPredicted RBP15.08■□□□□ 0
VPS9D1-207ENST00000568691 ANKRD18BA2A2Z9 1011 aa15.07■□□□□ 0
VPS9D1-207ENST00000568691 EPHA10Q5JZY3 1008 aa15.07■□□□□ 0
VPS9D1-207ENST00000568691 IFT57Q9NWB7 429 aa15.07■□□□□ 0
VPS9D1-207ENST00000568691 GTF3C3Q9Y5Q9 886 aa15.07■□□□□ 0
VPS9D1-207ENST00000568691 CDH23Q9H251 3354 aa15.06■□□□□ 0
VPS9D1-207ENST00000568691 CACNA1FO60840 1977 aa15.06■□□□□ 0
VPS9D1-207ENST00000568691 NEFLP07196 543 aa15.06■□□□□ 0
VPS9D1-207ENST00000568691 TRIM32Q13049 653 aa15.06■□□□□ 0
VPS9D1-207ENST00000568691 CCDC30Q5VVM6 783 aa15.06■□□□□ 0
VPS9D1-207ENST00000568691 FAM83AQ86UY5 434 aa15.06■□□□□ 0
VPS9D1-207ENST00000568691 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.06■□□□□ 0
VPS9D1-207ENST00000568691 RAPGEFL1Q9UHV5 662 aa15.06■□□□□ 0
VPS9D1-207ENST00000568691 RPAP1Q9BWH6 1393 aaPredicted RBP15.06■□□□□ 0
VPS9D1-207ENST00000568691 E9PSI1 815 aa15.05■□□□□ -0
VPS9D1-207ENST00000568691 PLIN1O60240 522 aa15.05■□□□□ -0
VPS9D1-207ENST00000568691 NEXNQ0ZGT2 675 aa15.05■□□□□ -0
VPS9D1-207ENST00000568691 FAM109BQ6ICB4 259 aaPredicted RBP15.05■□□□□ -0
VPS9D1-207ENST00000568691 WDR63Q8IWG1 891 aa15.05■□□□□ -0
VPS9D1-207ENST00000568691 FAM161BQ96MY7 647 aa15.05■□□□□ -0
VPS9D1-207ENST00000568691 PARK7Q99497 189 aaKnown RBP15.05■□□□□ -0
VPS9D1-207ENST00000568691 ZNF341Q9BYN7 854 aa15.05■□□□□ -0
VPS9D1-207ENST00000568691 UBE2OQ9C0C9 1292 aaKnown RBP15.05■□□□□ -0
VPS9D1-207ENST00000568691 PFASO15067 1338 aa15.05■□□□□ -0
VPS9D1-207ENST00000568691 DOCK3Q8IZD9 2030 aa15.04■□□□□ -0
VPS9D1-207ENST00000568691 IL16Q14005 1332 aa15.04■□□□□ -0
VPS9D1-207ENST00000568691 CAPN2P17655 700 aa15.04■□□□□ -0
VPS9D1-207ENST00000568691 NOL9Q5SY16 702 aaKnown RBP15.04■□□□□ -0
VPS9D1-207ENST00000568691 FKBP1CQ5VVH2 108 aa15.04■□□□□ -0
VPS9D1-207ENST00000568691 WWC1Q8IX03 1113 aa15.04■□□□□ -0
VPS9D1-207ENST00000568691 ZDHHC15Q96MV8 337 aa15.04■□□□□ -0
VPS9D1-207ENST00000568691 IQSEC3Q9UPP2 1182 aaPredicted RBP15.04■□□□□ -0
VPS9D1-207ENST00000568691 HIBADHP31937 336 aaKnown RBP15.03■□□□□ -0
VPS9D1-207ENST00000568691 HDLBPQ00341 1268 aaKnown RBP15.03■□□□□ -0
VPS9D1-207ENST00000568691 IFIT5Q13325 482 aaKnown RBP15.03■□□□□ -0
VPS9D1-207ENST00000568691 TRMT2AQ8IZ69 625 aaKnown RBP15.03■□□□□ -0
VPS9D1-207ENST00000568691 ANKLE1Q8NAG6 615 aa15.03■□□□□ -0
VPS9D1-207ENST00000568691 DDX60LQ5H9U9 1706 aaKnown RBP15.03■□□□□ -0
VPS9D1-207ENST00000568691 ATRNL1Q5VV63 1379 aa15.02■□□□□ -0
VPS9D1-207ENST00000568691 GNAI1P63096 354 aa15.02■□□□□ -0
VPS9D1-207ENST00000568691 SLFN5Q08AF3 891 aa15.02■□□□□ -0
VPS9D1-207ENST00000568691 DCAF15Q66K64 600 aa15.02■□□□□ -0
VPS9D1-207ENST00000568691 FBXO33Q7Z6M2 555 aa15.02■□□□□ -0
VPS9D1-207ENST00000568691 PUS3Q9BZE2 481 aaKnown RBP15.02■□□□□ -0
VPS9D1-207ENST00000568691 NBPF3Q9H094 633 aa15.02■□□□□ -0
VPS9D1-207ENST00000568691 A0A0G2JLL6 359 aaPredicted RBP15.01□□□□□ -0.01
VPS9D1-207ENST00000568691 CXCL11O14625 94 aa15.01□□□□□ -0.01
VPS9D1-207ENST00000568691 TNPO2O14787 897 aaKnown RBP15.01□□□□□ -0.01
VPS9D1-207ENST00000568691 SLURP2P0DP57 97 aa15.01□□□□□ -0.01
VPS9D1-207ENST00000568691 COL9A1P20849 921 aa15.01□□□□□ -0.01
VPS9D1-207ENST00000568691 UBE4AQ14139 1066 aa15.01□□□□□ -0.01
VPS9D1-207ENST00000568691 ERICH6BQ5W0A0 696 aa15.01□□□□□ -0.01
VPS9D1-207ENST00000568691 LMBR1LQ6UX01 489 aa15.01□□□□□ -0.01
VPS9D1-207ENST00000568691 PRRT2Q7Z6L0 340 aaPredicted RBP15.01□□□□□ -0.01
VPS9D1-207ENST00000568691 TEKT1Q969V4 418 aa15.01□□□□□ -0.01
VPS9D1-207ENST00000568691 C11orf49Q9H6J7 331 aa15.01□□□□□ -0.01
VPS9D1-207ENST00000568691 SALL2Q9Y467 1007 aaPredicted RBP15.01□□□□□ -0.01
VPS9D1-207ENST00000568691 PHF20L1A8MW92 1017 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms