RNA–Protein interactions for RNA: ENST00000568515.1

DENND4A-208, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 2,655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-208ENST00000568515 TMEM232C9JQI7 657 aa24.83■■□□□ 1.57
DENND4A-208ENST00000568515 GPAA1O43292 621 aa24.83■■□□□ 1.57
DENND4A-208ENST00000568515 MYO1BO43795 1136 aa24.83■■□□□ 1.57
DENND4A-208ENST00000568515 TADA3O75528 432 aa24.83■■□□□ 1.57
DENND4A-208ENST00000568515 GOLGA8FQ08AF8 430 aa24.83■■□□□ 1.57
DENND4A-208ENST00000568515 GOLGA8DPQ0D2H9 430 aa24.83■■□□□ 1.57
DENND4A-208ENST00000568515 RESP18Q5W5W9 173 aa24.83■■□□□ 1.57
DENND4A-208ENST00000568515 FANCLQ9NW38 375 aa24.83■■□□□ 1.57
DENND4A-208ENST00000568515 MST1RQ04912 1400 aa24.82■■□□□ 1.56
DENND4A-208ENST00000568515 ZSCAN12O43309 604 aa24.82■■□□□ 1.56
DENND4A-208ENST00000568515 CCDC57Q2TAC2 916 aa24.82■■□□□ 1.56
DENND4A-208ENST00000568515 MAP3K14Q99558 947 aa24.82■■□□□ 1.56
DENND4A-208ENST00000568515 CARD6Q9BX69 1037 aa24.82■■□□□ 1.56
DENND4A-208ENST00000568515 ANGEL1Q9UNK9 670 aaKnown RBP24.82■■□□□ 1.56
DENND4A-208ENST00000568515 PARP3Q9Y6F1 533 aa24.82■■□□□ 1.56
DENND4A-208ENST00000568515 A1BGP04217 495 aa24.81■■□□□ 1.56
DENND4A-208ENST00000568515 METAP2P50579 478 aaKnown RBP eCLIP24.81■■□□□ 1.56
DENND4A-208ENST00000568515 TRDNQ13061 729 aa24.81■■□□□ 1.56
DENND4A-208ENST00000568515 METTL16Q86W50 562 aaKnown RBP24.81■■□□□ 1.56
DENND4A-208ENST00000568515 CLIC6Q96NY7 704 aa24.81■■□□□ 1.56
DENND4A-208ENST00000568515 NUP188Q5SRE5 1749 aa24.81■■□□□ 1.56
DENND4A-208ENST00000568515 ERICH4A6NGS2 130 aa24.81■■□□□ 1.56
DENND4A-208ENST00000568515 EFCAB8A8MWE9 144 aa24.81■■□□□ 1.56
DENND4A-208ENST00000568515 CDKL5O76039 1030 aa24.81■■□□□ 1.56
DENND4A-208ENST00000568515 GNL2Q13823 731 aaKnown RBP24.81■■□□□ 1.56
DENND4A-208ENST00000568515 TMEM139Q8IV31 216 aa24.81■■□□□ 1.56
DENND4A-208ENST00000568515 FOXP4Q8IVH2 680 aaPredicted RBP24.8■■□□□ 1.56
DENND4A-208ENST00000568515 ARHGAP6O43182 974 aa24.8■■□□□ 1.56
DENND4A-208ENST00000568515 TPM1P09493 284 aa24.8■■□□□ 1.56
DENND4A-208ENST00000568515 PTPN21Q16825 1174 aa24.8■■□□□ 1.56
DENND4A-208ENST00000568515 LONRF3Q496Y0 759 aa24.8■■□□□ 1.56
DENND4A-208ENST00000568515 CCDC102BQ68D86 513 aa24.8■■□□□ 1.56
DENND4A-208ENST00000568515 NBPF3Q9H094 633 aa24.8■■□□□ 1.56
DENND4A-208ENST00000568515 DENND2AQ9ULE3 1009 aa24.8■■□□□ 1.56
DENND4A-208ENST00000568515 VWA3AA6NCI4 1184 aa24.79■■□□□ 1.56
DENND4A-208ENST00000568515 PPP2R2CQ9Y2T4 447 aa24.79■■□□□ 1.56
DENND4A-208ENST00000568515 PLEKHG2Q9H7P9 1386 aa24.79■■□□□ 1.56
DENND4A-208ENST00000568515 CUTAO60888 179 aa24.79■■□□□ 1.56
DENND4A-208ENST00000568515 PI16Q6UXB8 463 aa24.79■■□□□ 1.56
DENND4A-208ENST00000568515 KRBA2Q6ZNG9 492 aa24.79■■□□□ 1.56
DENND4A-208ENST00000568515 CYB5R4Q7L1T6 521 aa24.79■■□□□ 1.56
DENND4A-208ENST00000568515 C19orf44Q9H6X5 657 aa24.79■■□□□ 1.56
DENND4A-208ENST00000568515 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.79■■□□□ 1.56
DENND4A-208ENST00000568515 INTS13Q9NVM9 706 aa24.79■■□□□ 1.56
DENND4A-208ENST00000568515 TAOK2Q9UL54 1235 aa24.79■■□□□ 1.56
DENND4A-208ENST00000568515 PCDHA5Q9Y5H7 936 aa24.79■■□□□ 1.56
DENND4A-208ENST00000568515 RXRAP19793 462 aa24.79■■□□□ 1.56
DENND4A-208ENST00000568515 CPLX2Q6PUV4 134 aaKnown RBP24.79■■□□□ 1.56
DENND4A-208ENST00000568515 CNNM3Q8NE01 707 aa24.79■■□□□ 1.56
DENND4A-208ENST00000568515 PHKBQ93100 1093 aa24.79■■□□□ 1.56
DENND4A-208ENST00000568515 FBXO3Q9UK99 471 aa24.79■■□□□ 1.56
DENND4A-208ENST00000568515 KCNH3Q9ULD8 1083 aa24.79■■□□□ 1.56
DENND4A-208ENST00000568515 SH2B2O14492 632 aaPredicted RBP24.78■■□□□ 1.56
DENND4A-208ENST00000568515 CYP2C19P33261 490 aa24.78■■□□□ 1.56
DENND4A-208ENST00000568515 NKX2-3Q8TAU0 364 aa24.78■■□□□ 1.56
DENND4A-208ENST00000568515 MPHOSPH8Q99549 860 aa24.78■■□□□ 1.56
DENND4A-208ENST00000568515 CDC27P30260 824 aa24.78■■□□□ 1.56
DENND4A-208ENST00000568515 PDE4BQ07343 736 aa24.77■■□□□ 1.56
DENND4A-208ENST00000568515 TBX2Q13207 712 aaPredicted RBP24.77■■□□□ 1.56
DENND4A-208ENST00000568515 ALS2Q96Q42 1657 aa24.77■■□□□ 1.56
DENND4A-208ENST00000568515 ABCC12Q96J65 1359 aa24.77■■□□□ 1.56
DENND4A-208ENST00000568515 BMP6P22004 513 aa24.77■■□□□ 1.56
DENND4A-208ENST00000568515 APOA5Q6Q788 366 aa24.77■■□□□ 1.56
DENND4A-208ENST00000568515 TBC1D10CQ8IV04 446 aa24.77■■□□□ 1.56
DENND4A-208ENST00000568515 FAM177A1Q8N128 213 aaPredicted RBP24.77■■□□□ 1.56
DENND4A-208ENST00000568515 C1orf167Q5SNV9 1468 aa24.77■■□□□ 1.56
DENND4A-208ENST00000568515 PKD1L3Q7Z443 1732 aa24.76■■□□□ 1.55
DENND4A-208ENST00000568515 BAG1Q99933 345 aaPredicted RBP24.76■■□□□ 1.55
DENND4A-208ENST00000568515 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.76■■□□□ 1.55
DENND4A-208ENST00000568515 COL18A1P39060 1754 aa24.76■■□□□ 1.55
DENND4A-208ENST00000568515 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.76■■□□□ 1.552e-6■□□□□ 11.3
DENND4A-208ENST00000568515 CALCOCO1Q9P1Z2 691 aa24.76■■□□□ 1.55
DENND4A-208ENST00000568515 ATP8B1O43520 1251 aa24.75■■□□□ 1.55
DENND4A-208ENST00000568515 CASQ1P31415 396 aa24.75■■□□□ 1.55
DENND4A-208ENST00000568515 TRIM29Q14134 588 aa24.75■■□□□ 1.55
DENND4A-208ENST00000568515 CHRNA2Q15822 529 aa24.75■■□□□ 1.55
DENND4A-208ENST00000568515 GOLGA6L9A6NEM1 432 aa24.75■■□□□ 1.55
DENND4A-208ENST00000568515 SENP2Q9HC62 589 aa24.75■■□□□ 1.55
DENND4A-208ENST00000568515 MYH7P12883 1935 aa24.74■■□□□ 1.55
DENND4A-208ENST00000568515 SEC31AO94979 1220 aaKnown RBP24.74■■□□□ 1.55
DENND4A-208ENST00000568515 IARSP41252 1262 aaKnown RBP24.74■■□□□ 1.55
DENND4A-208ENST00000568515 MAP3K9P80192 1104 aa24.74■■□□□ 1.55
DENND4A-208ENST00000568515 MDM2Q00987 491 aaPredicted RBP24.74■■□□□ 1.55
DENND4A-208ENST00000568515 MICU3Q86XE3 530 aa24.74■■□□□ 1.55
DENND4A-208ENST00000568515 CCDC85AQ96PX6 553 aaPredicted RBP24.74■■□□□ 1.55
DENND4A-208ENST00000568515 FOXN1O15353 648 aa24.74■■□□□ 1.55
DENND4A-208ENST00000568515 GNG11P61952 73 aa24.74■■□□□ 1.55
DENND4A-208ENST00000568515 NTRK3Q16288 839 aa24.74■■□□□ 1.55
DENND4A-208ENST00000568515 TAF7LQ5H9L4 462 aa24.74■■□□□ 1.55
DENND4A-208ENST00000568515 ELOA2Q8IYF1 753 aaPredicted RBP24.74■■□□□ 1.55
DENND4A-208ENST00000568515 PDILTQ8N807 584 aa24.74■■□□□ 1.55
DENND4A-208ENST00000568515 WDR24Q96S15 920 aa24.74■■□□□ 1.55
DENND4A-208ENST00000568515 ISCA1Q9BUE6 129 aa24.74■■□□□ 1.55
DENND4A-208ENST00000568515 ZBTB43O43298 467 aa24.73■■□□□ 1.55
DENND4A-208ENST00000568515 STX10O60499 249 aa24.73■■□□□ 1.55
DENND4A-208ENST00000568515 ADD2P35612 726 aa24.73■■□□□ 1.55
DENND4A-208ENST00000568515 ZKSCAN7Q9P0L1 754 aaPredicted RBP24.73■■□□□ 1.55
DENND4A-208ENST00000568515 HSP90AA4PQ58FG1 418 aa24.73■■□□□ 1.55
DENND4A-208ENST00000568515 KRI1Q8N9T8 703 aaKnown RBP24.73■■□□□ 1.55
DENND4A-208ENST00000568515 RANBP6O60518 1105 aaKnown RBP24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms