RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 ECM29Q5VYK3 1845 aa5.84□□□□□ -1.47
HERPUD1-213ENST00000568358 SPDYE16A6NNV3 312 aaPredicted RBP5.84□□□□□ -1.47
HERPUD1-213ENST00000568358 F8W031 263 aaPredicted RBP5.84□□□□□ -1.47
HERPUD1-213ENST00000568358 UBE2Q2LH0YL09 131 aa5.84□□□□□ -1.47
HERPUD1-213ENST00000568358 SASH1O94885 1247 aa5.84□□□□□ -1.47
HERPUD1-213ENST00000568358 BRD1O95696 1058 aa5.84□□□□□ -1.47
HERPUD1-213ENST00000568358 IL1R1P14778 569 aa5.84□□□□□ -1.47
HERPUD1-213ENST00000568358 HIBADHP31937 336 aaKnown RBP5.84□□□□□ -1.47
HERPUD1-213ENST00000568358 FKBP1AP62942 108 aaKnown RBP5.84□□□□□ -1.47
HERPUD1-213ENST00000568358 SREBF2Q12772 1141 aa5.84□□□□□ -1.47
HERPUD1-213ENST00000568358 TNFAIP1Q13829 316 aa5.84□□□□□ -1.47
HERPUD1-213ENST00000568358 PRAMEF18Q5VWM3 479 aa5.84□□□□□ -1.47
HERPUD1-213ENST00000568358 EFCAB3Q8N7B9 438 aa5.84□□□□□ -1.47
HERPUD1-213ENST00000568358 MARVELD3Q96A59 401 aa5.84□□□□□ -1.47
HERPUD1-213ENST00000568358 SLC10A4Q96EP9 437 aa5.84□□□□□ -1.47
HERPUD1-213ENST00000568358 ZNF594Q96JF6 807 aaPredicted RBP5.84□□□□□ -1.47
HERPUD1-213ENST00000568358 CSRNP1Q96S65 589 aa5.84□□□□□ -1.47
HERPUD1-213ENST00000568358 RNF186Q9NXI6 227 aa5.84□□□□□ -1.47
HERPUD1-213ENST00000568358 SCAF8Q9UPN6 1271 aaKnown RBP5.84□□□□□ -1.47
HERPUD1-213ENST00000568358 PPP2R3BQ9Y5P8 575 aa5.84□□□□□ -1.47
HERPUD1-213ENST00000568358 PAPPA2Q9BXP8 1791 aa5.84□□□□□ -1.47
HERPUD1-213ENST00000568358 THSD7BQ9C0I4 1608 aa5.84□□□□□ -1.47
HERPUD1-213ENST00000568358 KLRK1P26718 216 aa5.83□□□□□ -1.48
HERPUD1-213ENST00000568358 IREB2P48200 963 aaKnown RBP5.83□□□□□ -1.48
HERPUD1-213ENST00000568358 TNNI2P48788 182 aa5.83□□□□□ -1.48
HERPUD1-213ENST00000568358 INHBEP58166 350 aa5.83□□□□□ -1.48
HERPUD1-213ENST00000568358 MLLT1Q03111 559 aaPredicted RBP5.83□□□□□ -1.48
HERPUD1-213ENST00000568358 PRKG1Q13976 671 aa5.83□□□□□ -1.48
HERPUD1-213ENST00000568358 ALDH1L2Q3SY69 923 aa5.83□□□□□ -1.48
HERPUD1-213ENST00000568358 CFAP100Q494V2 611 aa5.83□□□□□ -1.48
HERPUD1-213ENST00000568358 METTL24Q5JXM2 366 aa5.83□□□□□ -1.48
HERPUD1-213ENST00000568358 MFSD14BQ5SR56 506 aa5.83□□□□□ -1.48
HERPUD1-213ENST00000568358 OTUD7BQ6GQQ9 843 aa5.83□□□□□ -1.48
HERPUD1-213ENST00000568358 RASAL3Q86YV0 1011 aa5.83□□□□□ -1.48
HERPUD1-213ENST00000568358 MRPL50Q8N5N7 158 aaKnown RBP5.83□□□□□ -1.48
HERPUD1-213ENST00000568358 MTMR14Q8NCE2 650 aa5.83□□□□□ -1.48
HERPUD1-213ENST00000568358 ZIC5Q96T25 663 aa5.83□□□□□ -1.48
HERPUD1-213ENST00000568358 MCOLN1Q9GZU1 580 aa5.83□□□□□ -1.48
HERPUD1-213ENST00000568358 DEFB129Q9H1M3 183 aa5.83□□□□□ -1.48
HERPUD1-213ENST00000568358 VEZTQ9HBM0 779 aa5.83□□□□□ -1.48
HERPUD1-213ENST00000568358 ANGEL1Q9UNK9 670 aaKnown RBP5.83□□□□□ -1.48
HERPUD1-213ENST00000568358 COG6Q9Y2V7 657 aa5.83□□□□□ -1.48
HERPUD1-213ENST00000568358 SPDYE5A6NIY4 337 aa5.82□□□□□ -1.48
HERPUD1-213ENST00000568358 UNCXA6NJT0 531 aa5.82□□□□□ -1.48
HERPUD1-213ENST00000568358 SNAP23O00161 211 aa5.82□□□□□ -1.48
HERPUD1-213ENST00000568358 ALDH1A1P00352 501 aa5.82□□□□□ -1.48
HERPUD1-213ENST00000568358 IFIT1P09914 478 aaKnown RBP5.82□□□□□ -1.48
HERPUD1-213ENST00000568358 CT47B1P0C2W7 299 aaPredicted RBP5.82□□□□□ -1.48
HERPUD1-213ENST00000568358 NBPF7P0C2Y1 421 aaPredicted RBP5.82□□□□□ -1.48
HERPUD1-213ENST00000568358 GYG1P46976 350 aa5.82□□□□□ -1.48
HERPUD1-213ENST00000568358 TM4SF4P48230 202 aa5.82□□□□□ -1.48
HERPUD1-213ENST00000568358 PTPN12Q05209 780 aaKnown RBP5.82□□□□□ -1.48
HERPUD1-213ENST00000568358 SLFN5Q08AF3 891 aa5.82□□□□□ -1.48
HERPUD1-213ENST00000568358 PKN2Q16513 984 aaKnown RBP5.82□□□□□ -1.48
HERPUD1-213ENST00000568358 EPHA10Q5JZY3 1008 aa5.82□□□□□ -1.48
HERPUD1-213ENST00000568358 MOB2Q70IA6 237 aa5.82□□□□□ -1.48
HERPUD1-213ENST00000568358 TDRD7Q8NHU6 1098 aaKnown RBP5.82□□□□□ -1.48
HERPUD1-213ENST00000568358 TBC1D22AQ8WUA7 517 aa5.82□□□□□ -1.48
HERPUD1-213ENST00000568358 SUCLG2Q96I99 432 aa5.82□□□□□ -1.48
HERPUD1-213ENST00000568358 BICC1Q9H694 974 aaKnown RBP5.82□□□□□ -1.48
HERPUD1-213ENST00000568358 SMC4Q9NTJ3 1288 aa5.82□□□□□ -1.48
HERPUD1-213ENST00000568358 TMOD2Q9NZR1 351 aa5.82□□□□□ -1.48
HERPUD1-213ENST00000568358 TTF2Q9UNY4 1162 aaKnown RBP5.82□□□□□ -1.48
HERPUD1-213ENST00000568358 JAG2Q9Y219 1238 aa5.82□□□□□ -1.48
HERPUD1-213ENST00000568358 RIPOR2Q9Y4F9 1068 aa5.82□□□□□ -1.48
HERPUD1-213ENST00000568358 UTYO14607 1347 aa5.81□□□□□ -1.48
HERPUD1-213ENST00000568358 FAM205AQ6ZU69 1335 aa5.81□□□□□ -1.48
HERPUD1-213ENST00000568358 A0A1B0GUL6 1792 aa5.81□□□□□ -1.48
HERPUD1-213ENST00000568358 CLRN2A0PK11 232 aa5.81□□□□□ -1.48
HERPUD1-213ENST00000568358 MANSC4A6NHS7 340 aaPredicted RBP5.81□□□□□ -1.48
HERPUD1-213ENST00000568358 WDHD1O75717 1129 aaPredicted RBP5.81□□□□□ -1.48
HERPUD1-213ENST00000568358 PDE8BO95263 885 aa5.81□□□□□ -1.48
HERPUD1-213ENST00000568358 TBC1D8O95759 1140 aa5.81□□□□□ -1.48
HERPUD1-213ENST00000568358 UBTFL1P0CB47 393 aaPredicted RBP5.81□□□□□ -1.48
HERPUD1-213ENST00000568358 MS4A1P11836 297 aa5.81□□□□□ -1.48
HERPUD1-213ENST00000568358 SLC5A1P13866 664 aa5.81□□□□□ -1.48
HERPUD1-213ENST00000568358 CHAF1AQ13111 956 aaPredicted RBP5.81□□□□□ -1.48
HERPUD1-213ENST00000568358 CTU1Q7Z7A3 348 aaKnown RBP5.81□□□□□ -1.48
HERPUD1-213ENST00000568358 ZNF710Q8N1W2 664 aa5.81□□□□□ -1.48
HERPUD1-213ENST00000568358 SSH1Q8WYL5 1049 aa5.81□□□□□ -1.48
HERPUD1-213ENST00000568358 TEKT1Q969V4 418 aa5.81□□□□□ -1.48
HERPUD1-213ENST00000568358 HOOK2Q96ED9 719 aa5.81□□□□□ -1.48
HERPUD1-213ENST00000568358 ZBED3Q96IU2 234 aaPredicted RBP5.81□□□□□ -1.48
HERPUD1-213ENST00000568358 FAM84BQ96KN1 310 aaPredicted RBP5.81□□□□□ -1.48
HERPUD1-213ENST00000568358 PRMT6Q96LA8 375 aaPredicted RBP5.81□□□□□ -1.48
HERPUD1-213ENST00000568358 TMUB1Q9BVT8 246 aa5.81□□□□□ -1.48
HERPUD1-213ENST00000568358 PUS3Q9BZE2 481 aaKnown RBP5.81□□□□□ -1.48
HERPUD1-213ENST00000568358 GNL3LQ9NVN8 582 aaKnown RBP5.81□□□□□ -1.48
HERPUD1-213ENST00000568358 USTQ9Y2C2 406 aa5.81□□□□□ -1.48
HERPUD1-213ENST00000568358 COL1A1P02452 1464 aaPredicted RBP5.81□□□□□ -1.48
HERPUD1-213ENST00000568358 MYH13Q9UKX3 1938 aa5.81□□□□□ -1.48
HERPUD1-213ENST00000568358 MAST3O60307 1309 aa5.8□□□□□ -1.48
HERPUD1-213ENST00000568358 ZNF521Q96K83 1311 aa5.8□□□□□ -1.48
HERPUD1-213ENST00000568358 IPO8O15397 1037 aaKnown RBP5.8□□□□□ -1.48
HERPUD1-213ENST00000568358 FKTNO75072 461 aa5.8□□□□□ -1.48
HERPUD1-213ENST00000568358 ZBTB48P10074 688 aaPredicted RBP5.8□□□□□ -1.48
HERPUD1-213ENST00000568358 CRKP46108 304 aa5.8□□□□□ -1.48
HERPUD1-213ENST00000568358 HDLBPQ00341 1268 aaKnown RBP5.8□□□□□ -1.48
HERPUD1-213ENST00000568358 RASA3Q14644 834 aa5.8□□□□□ -1.48
HERPUD1-213ENST00000568358 ARHGEF6Q15052 776 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms