RNA–Protein interactions for RNA: ENST00000568340.5

CDH11-214, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 514 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-214ENST00000568340 NKX2-3Q8TAU0 364 aa12.4□□□□□ -0.42
CDH11-214ENST00000568340 ZBED3Q96IU2 234 aaPredicted RBP12.4□□□□□ -0.42
CDH11-214ENST00000568340 UPF2Q9HAU5 1272 aaKnown RBP12.4□□□□□ -0.42
CDH11-214ENST00000568340 TACC3Q9Y6A5 838 aa12.4□□□□□ -0.42
CDH11-214ENST00000568340 U3KPZ7 1027 aaPredicted RBP12.4□□□□□ -0.42
CDH11-214ENST00000568340 UTRNP46939 3433 aa12.4□□□□□ -0.42
CDH11-214ENST00000568340 MAGEB6P1A0A0J9YX57 407 aa12.39□□□□□ -0.43
CDH11-214ENST00000568340 CD2BP2O95400 341 aaKnown RBP12.39□□□□□ -0.43
CDH11-214ENST00000568340 FGAP02671 866 aa12.39□□□□□ -0.43
CDH11-214ENST00000568340 GSTO1P78417 241 aa12.39□□□□□ -0.43
CDH11-214ENST00000568340 ADCK5Q3MIX3 580 aa12.39□□□□□ -0.43
CDH11-214ENST00000568340 HHIPL2Q6UWX4 724 aa12.39□□□□□ -0.43
CDH11-214ENST00000568340 AIDAQ96BJ3 306 aa12.39□□□□□ -0.43
CDH11-214ENST00000568340 ZDHHC15Q96MV8 337 aa12.39□□□□□ -0.43
CDH11-214ENST00000568340 AATFQ9NY61 560 aaKnown RBP eCLIP12.39□□□□□ -0.43
CDH11-214ENST00000568340 TTF2Q9UNY4 1162 aaKnown RBP12.39□□□□□ -0.43
CDH11-214ENST00000568340 PCDHAC2Q9Y5I4 1007 aa12.39□□□□□ -0.43
CDH11-214ENST00000568340 NAV1Q8NEY1 1877 aa12.39□□□□□ -0.43
CDH11-214ENST00000568340 MYO3BQ8WXR4 1341 aa12.38□□□□□ -0.43
CDH11-214ENST00000568340 SMIM22K7EJ46 135 aa12.38□□□□□ -0.43
CDH11-214ENST00000568340 RAD17O75943 681 aa12.38□□□□□ -0.43
CDH11-214ENST00000568340 GNAT2P19087 354 aa12.38□□□□□ -0.43
CDH11-214ENST00000568340 LMNB1P20700 586 aa12.38□□□□□ -0.43
CDH11-214ENST00000568340 BTDP43251 543 aa12.38□□□□□ -0.43
CDH11-214ENST00000568340 GIMAP6Q6P9H5 292 aa12.38□□□□□ -0.43
CDH11-214ENST00000568340 KIAA1211Q6ZU35 1233 aa12.38□□□□□ -0.43
CDH11-214ENST00000568340 TBC1D10CQ8IV04 446 aa12.38□□□□□ -0.43
CDH11-214ENST00000568340 IFNL3Q8IZI9 196 aa12.38□□□□□ -0.43
CDH11-214ENST00000568340 SDR42E1Q8WUS8 393 aa12.38□□□□□ -0.43
CDH11-214ENST00000568340 TTC14Q96N46 770 aa12.38□□□□□ -0.43
CDH11-214ENST00000568340 SIPA1L1O43166 1804 aa12.38□□□□□ -0.43
CDH11-214ENST00000568340 ROBO3Q96MS0 1386 aa12.38□□□□□ -0.43
CDH11-214ENST00000568340 ECM29Q5VYK3 1845 aa12.37□□□□□ -0.43
CDH11-214ENST00000568340 PATL2C9JE40 543 aaKnown RBP12.37□□□□□ -0.43
CDH11-214ENST00000568340 WDHD1O75717 1129 aaPredicted RBP12.37□□□□□ -0.43
CDH11-214ENST00000568340 CRKP46108 304 aa12.37□□□□□ -0.43
CDH11-214ENST00000568340 ZNF280AP59817 542 aaPredicted RBP12.37□□□□□ -0.43
CDH11-214ENST00000568340 EVX2Q03828 476 aa12.37□□□□□ -0.43
CDH11-214ENST00000568340 KIAA0825Q8IV33 1275 aa12.37□□□□□ -0.43
CDH11-214ENST00000568340 AGBL3Q8NEM8 1001 aa12.37□□□□□ -0.43
CDH11-214ENST00000568340 SH3RF3Q8TEJ3 882 aaPredicted RBP12.37□□□□□ -0.43
CDH11-214ENST00000568340 TM6SF1Q9BZW5 370 aa12.37□□□□□ -0.43
CDH11-214ENST00000568340 DCP1AQ9NPI6 582 aaPredicted RBP12.37□□□□□ -0.43
CDH11-214ENST00000568340 SERPINA10Q9UK55 444 aa12.37□□□□□ -0.43
CDH11-214ENST00000568340 COL2A1P02458 1487 aaPredicted RBP12.36□□□□□ -0.43
CDH11-214ENST00000568340 SHTN1A0MZ66 631 aa12.36□□□□□ -0.43
CDH11-214ENST00000568340 LDHCP07864 332 aa12.36□□□□□ -0.43
CDH11-214ENST00000568340 FGRP09769 529 aa12.36□□□□□ -0.43
CDH11-214ENST00000568340 SCNN1DP51172 638 aa12.36□□□□□ -0.43
CDH11-214ENST00000568340 RABEP1Q15276 862 aa12.36□□□□□ -0.43
CDH11-214ENST00000568340 CIAPIN1Q6FI81 312 aa12.36□□□□□ -0.43
CDH11-214ENST00000568340 CERS3Q8IU89 383 aa12.36□□□□□ -0.43
CDH11-214ENST00000568340 MTMR14Q8NCE2 650 aa12.36□□□□□ -0.43
CDH11-214ENST00000568340 ANAPC4Q9UJX5 808 aa12.36□□□□□ -0.43
CDH11-214ENST00000568340 ZBTB12Q9Y330 459 aaPredicted RBP12.36□□□□□ -0.43
CDH11-214ENST00000568340 SLC4A4Q9Y6R1 1079 aa12.36□□□□□ -0.43
CDH11-214ENST00000568340 FLT1P17948 1338 aa12.36□□□□□ -0.43
CDH11-214ENST00000568340 F8W031 263 aaPredicted RBP12.35□□□□□ -0.43
CDH11-214ENST00000568340 MCCP23508 829 aa12.35□□□□□ -0.43
CDH11-214ENST00000568340 SBK1Q52WX2 424 aa12.35□□□□□ -0.43
CDH11-214ENST00000568340 CDC42EP5Q6NZY7 148 aa12.35□□□□□ -0.43
CDH11-214ENST00000568340 FBXW7Q969H0 707 aa12.35□□□□□ -0.43
CDH11-214ENST00000568340 SNX21Q969T3 373 aa12.35□□□□□ -0.43
CDH11-214ENST00000568340 TEKT1Q969V4 418 aa12.35□□□□□ -0.43
CDH11-214ENST00000568340 ZSWIM6Q9HCJ5 1215 aa12.35□□□□□ -0.43
CDH11-214ENST00000568340 DDX4Q9NQI0 724 aaKnown RBP12.35□□□□□ -0.43
CDH11-214ENST00000568340 BAZ2AQ9UIF9 1905 aaKnown RBP12.35□□□□□ -0.43
CDH11-214ENST00000568340 SPDYE2BA6NHP3 402 aa12.34□□□□□ -0.43
CDH11-214ENST00000568340 G3V3G9 751 aa12.34□□□□□ -0.43
CDH11-214ENST00000568340 NPM3O75607 178 aaKnown RBP12.34□□□□□ -0.43
CDH11-214ENST00000568340 SPDYE6P0CI01 402 aa12.34□□□□□ -0.43
CDH11-214ENST00000568340 RPS12P25398 132 aaKnown RBP12.34□□□□□ -0.43
CDH11-214ENST00000568340 DCAF8Q5TAQ9 597 aa12.34□□□□□ -0.43
CDH11-214ENST00000568340 CTR9Q6PD62 1173 aa12.34□□□□□ -0.43
CDH11-214ENST00000568340 ARHGAP27Q6ZUM4 889 aa12.34□□□□□ -0.43
CDH11-214ENST00000568340 SLF2Q8IX21 1173 aa12.34□□□□□ -0.43
CDH11-214ENST00000568340 MB21D2Q8IYB1 491 aaPredicted RBP12.34□□□□□ -0.43
CDH11-214ENST00000568340 JDP2Q8WYK2 163 aa12.34□□□□□ -0.43
CDH11-214ENST00000568340 IDI2Q9BXS1 227 aa12.34□□□□□ -0.43
CDH11-214ENST00000568340 CRNKL1Q9BZJ0 848 aaKnown RBP12.34□□□□□ -0.43
CDH11-214ENST00000568340 ATP8A2Q9NTI2 1148 aa12.34□□□□□ -0.43
CDH11-214ENST00000568340 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.34□□□□□ -0.43
CDH11-214ENST00000568340 NEDD4P46934 1319 aa12.34□□□□□ -0.43
CDH11-214ENST00000568340 ATRNL1Q5VV63 1379 aa12.33□□□□□ -0.44
CDH11-214ENST00000568340 CYP2D7A0A087X1C5 515 aa12.33□□□□□ -0.44
CDH11-214ENST00000568340 E7EWF7 191 aa12.33□□□□□ -0.44
CDH11-214ENST00000568340 BAG3O95817 575 aa12.33□□□□□ -0.44
CDH11-214ENST00000568340 EGFRP00533 1210 aa12.33□□□□□ -0.44
CDH11-214ENST00000568340 CYP2D6P10635 497 aa12.33□□□□□ -0.44
CDH11-214ENST00000568340 ANTXR2P58335 489 aa12.33□□□□□ -0.44
CDH11-214ENST00000568340 HAND2P61296 217 aa12.33□□□□□ -0.44
CDH11-214ENST00000568340 NFIAQ12857 509 aa12.33□□□□□ -0.44
CDH11-214ENST00000568340 CFAP100Q494V2 611 aa12.33□□□□□ -0.44
CDH11-214ENST00000568340 STAG1Q8WVM7 1258 aa12.33□□□□□ -0.44
CDH11-214ENST00000568340 DPF2Q92785 391 aa12.33□□□□□ -0.44
CDH11-214ENST00000568340 PRMT6Q96LA8 375 aaPredicted RBP12.33□□□□□ -0.44
CDH11-214ENST00000568340 AGXT2Q9BYV1 514 aa12.33□□□□□ -0.44
CDH11-214ENST00000568340 TBC1D2Q9BYX2 928 aa12.33□□□□□ -0.44
CDH11-214ENST00000568340 NAPBQ9H115 298 aa12.33□□□□□ -0.44
CDH11-214ENST00000568340 FAM198AQ9UFP1 575 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms