RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 SVOPQ8N4V2 548 aa7.85□□□□□ -1.15
CAPN3-218ENST00000568153 USHBP1Q8N6Y0 703 aa7.85□□□□□ -1.15
CAPN3-218ENST00000568153 LRRC59Q96AG4 307 aaKnown RBP7.85□□□□□ -1.15
CAPN3-218ENST00000568153 CCDC136Q96JN2 1154 aa7.85□□□□□ -1.15
CAPN3-218ENST00000568153 PHF24Q9UPV7 400 aa7.85□□□□□ -1.15
CAPN3-218ENST00000568153 MAP2P11137 1827 aaKnown RBP7.85□□□□□ -1.15
CAPN3-218ENST00000568153 KDRP35968 1356 aa7.84□□□□□ -1.15
CAPN3-218ENST00000568153 NRKQ7Z2Y5 1582 aa7.84□□□□□ -1.15
CAPN3-218ENST00000568153 IPO8O15397 1037 aaKnown RBP7.84□□□□□ -1.15
CAPN3-218ENST00000568153 VAMP4O75379 141 aa7.84□□□□□ -1.15
CAPN3-218ENST00000568153 BRD1O95696 1058 aa7.84□□□□□ -1.15
CAPN3-218ENST00000568153 CELA2BP08218 269 aaPredicted RBP7.84□□□□□ -1.15
CAPN3-218ENST00000568153 PDIA4P13667 645 aaKnown RBP7.84□□□□□ -1.15
CAPN3-218ENST00000568153 ALDH1L2Q3SY69 923 aa7.84□□□□□ -1.15
CAPN3-218ENST00000568153 FRAT1Q92837 279 aaPredicted RBP7.84□□□□□ -1.15
CAPN3-218ENST00000568153 ACDQ96AP0 544 aa7.84□□□□□ -1.15
CAPN3-218ENST00000568153 CRBNQ96SW2 442 aa7.84□□□□□ -1.15
CAPN3-218ENST00000568153 NEUROD4Q9HD90 331 aa7.84□□□□□ -1.15
CAPN3-218ENST00000568153 NLRP2Q9NX02 1062 aa7.84□□□□□ -1.15
CAPN3-218ENST00000568153 PCDHGC4Q9Y5F7 938 aa7.84□□□□□ -1.15
CAPN3-218ENST00000568153 GJA3Q9Y6H8 435 aa7.84□□□□□ -1.15
CAPN3-218ENST00000568153 TNFRSF10BO14763 440 aa7.83□□□□□ -1.16
CAPN3-218ENST00000568153 TOM1O60784 492 aa7.83□□□□□ -1.16
CAPN3-218ENST00000568153 FGFR3P22607 806 aa7.83□□□□□ -1.16
CAPN3-218ENST00000568153 TAF7Q15545 349 aaPredicted RBP7.83□□□□□ -1.16
CAPN3-218ENST00000568153 CHRNA2Q15822 529 aa7.83□□□□□ -1.16
CAPN3-218ENST00000568153 C11orf91Q3C1V1 193 aa7.83□□□□□ -1.16
CAPN3-218ENST00000568153 FAM26DQ5JW98 314 aa7.83□□□□□ -1.16
CAPN3-218ENST00000568153 C20orf194Q5TEA3 1177 aa7.83□□□□□ -1.16
CAPN3-218ENST00000568153 SAMD5Q5TGI4 173 aa7.83□□□□□ -1.16
CAPN3-218ENST00000568153 GTF3C2Q8WUA4 911 aaPredicted RBP7.83□□□□□ -1.16
CAPN3-218ENST00000568153 BABAM1Q9NWV8 329 aa7.83□□□□□ -1.16
CAPN3-218ENST00000568153 PIK3C2AO00443 1686 aa7.83□□□□□ -1.16
CAPN3-218ENST00000568153 STRCP1A6NGW2 1772 aa7.82□□□□□ -1.16
CAPN3-218ENST00000568153 ELL2O00472 640 aaPredicted RBP7.82□□□□□ -1.16
CAPN3-218ENST00000568153 C2CD2LO14523 706 aa7.82□□□□□ -1.16
CAPN3-218ENST00000568153 ATXN7O15265 892 aaPredicted RBP7.82□□□□□ -1.16
CAPN3-218ENST00000568153 ARID4AP29374 1257 aaPredicted RBP7.82□□□□□ -1.16
CAPN3-218ENST00000568153 MAP2K3P46734 347 aa7.82□□□□□ -1.16
CAPN3-218ENST00000568153 EVA1CP58658 441 aa7.82□□□□□ -1.16
CAPN3-218ENST00000568153 AAMPQ13685 434 aa7.82□□□□□ -1.16
CAPN3-218ENST00000568153 AKAP4Q5JQC9 854 aa7.82□□□□□ -1.16
CAPN3-218ENST00000568153 ZKSCAN2Q63HK3 967 aa7.82□□□□□ -1.16
CAPN3-218ENST00000568153 TNS3Q68CZ2 1445 aa7.82□□□□□ -1.16
CAPN3-218ENST00000568153 HOMEZQ8IX15 550 aa7.82□□□□□ -1.16
CAPN3-218ENST00000568153 C8orf58Q8NAV2 365 aa7.82□□□□□ -1.16
CAPN3-218ENST00000568153 IL17REQ8NFR9 667 aa7.82□□□□□ -1.16
CAPN3-218ENST00000568153 SSH1Q8WYL5 1049 aa7.82□□□□□ -1.16
CAPN3-218ENST00000568153 RAPGEF4Q8WZA2 1011 aa7.82□□□□□ -1.16
CAPN3-218ENST00000568153 SMC4Q9NTJ3 1288 aa7.82□□□□□ -1.16
CAPN3-218ENST00000568153 ANKIB1Q9P2G1 1089 aa7.82□□□□□ -1.16
CAPN3-218ENST00000568153 DMGDHQ9UI17 866 aaKnown RBP7.82□□□□□ -1.16
CAPN3-218ENST00000568153 NSFL1CQ9UNZ2 370 aaKnown RBP7.82□□□□□ -1.16
CAPN3-218ENST00000568153 DNMT3AQ9Y6K1 912 aaPredicted RBP7.82□□□□□ -1.16
CAPN3-218ENST00000568153 DCDC2BA2VCK2 349 aa7.81□□□□□ -1.16
CAPN3-218ENST00000568153 TGFBR3LH3BV60 316 aa7.81□□□□□ -1.16
CAPN3-218ENST00000568153 FAM157BP0CG42 384 aa7.81□□□□□ -1.16
CAPN3-218ENST00000568153 SERPINB4P48594 390 aa7.81□□□□□ -1.16
CAPN3-218ENST00000568153 CTBSQ01459 385 aa7.81□□□□□ -1.16
CAPN3-218ENST00000568153 TNP2Q05952 138 aa7.81□□□□□ -1.16
CAPN3-218ENST00000568153 MTMR3Q13615 1198 aa7.81□□□□□ -1.16
CAPN3-218ENST00000568153 HIF1AQ16665 826 aa7.81□□□□□ -1.16
CAPN3-218ENST00000568153 TWISTNBQ3B726 338 aaPredicted RBP7.81□□□□□ -1.16
CAPN3-218ENST00000568153 C1orf141Q5JVX7 400 aa7.81□□□□□ -1.16
CAPN3-218ENST00000568153 ZNF530Q6P9A1 599 aaPredicted RBP7.81□□□□□ -1.16
CAPN3-218ENST00000568153 TSPYL6Q8N831 410 aa7.81□□□□□ -1.16
CAPN3-218ENST00000568153 HELQQ8TDG4 1101 aa7.81□□□□□ -1.16
CAPN3-218ENST00000568153 ARHGAP45Q92619 1136 aa7.81□□□□□ -1.16
CAPN3-218ENST00000568153 IFT43Q96FT9 208 aa7.81□□□□□ -1.16
CAPN3-218ENST00000568153 PRDM11Q9NQV5 511 aa7.81□□□□□ -1.16
CAPN3-218ENST00000568153 MIS18AQ9NYP9 233 aa7.81□□□□□ -1.16
CAPN3-218ENST00000568153 TSPYL4Q9UJ04 414 aa7.81□□□□□ -1.16
CAPN3-218ENST00000568153 NOB1Q9ULX3 412 aaKnown RBP7.81□□□□□ -1.16
CAPN3-218ENST00000568153 SPG7Q9UQ90 795 aa7.81□□□□□ -1.16
CAPN3-218ENST00000568153 KIF1AQ12756 1690 aa7.81□□□□□ -1.16
CAPN3-218ENST00000568153 CPDO75976 1380 aa7.81□□□□□ -1.16
CAPN3-218ENST00000568153 PXDNQ92626 1479 aa7.81□□□□□ -1.16
CAPN3-218ENST00000568153 SLIT3O75094 1523 aa7.8□□□□□ -1.16
CAPN3-218ENST00000568153 NFAT5O94916 1531 aa7.8□□□□□ -1.16
CAPN3-218ENST00000568153 EFSO43281 561 aa7.8□□□□□ -1.16
CAPN3-218ENST00000568153 MAPTP10636 758 aaKnown RBP7.8□□□□□ -1.16
CAPN3-218ENST00000568153 TYRO3Q06418 890 aa7.8□□□□□ -1.16
CAPN3-218ENST00000568153 IER5Q5VY09 327 aa7.8□□□□□ -1.16
CAPN3-218ENST00000568153 BTLAQ7Z6A9 289 aa7.8□□□□□ -1.16
CAPN3-218ENST00000568153 ETFBKMTQ8IXQ9 262 aa7.8□□□□□ -1.16
CAPN3-218ENST00000568153 DZIP1LQ8IYY4 767 aaKnown RBP7.8□□□□□ -1.16
CAPN3-218ENST00000568153 BCL2L13Q9BXK5 485 aa7.8□□□□□ -1.16
CAPN3-218ENST00000568153 CHMP4AQ9BY43 222 aa7.8□□□□□ -1.16
CAPN3-218ENST00000568153 LGR6Q9HBX8 967 aa7.8□□□□□ -1.16
CAPN3-218ENST00000568153 MTMR7Q9Y216 660 aa7.8□□□□□ -1.16
CAPN3-218ENST00000568153 KIAA0232Q92628 1395 aa7.8□□□□□ -1.16
CAPN3-218ENST00000568153 PEAK1Q9H792 1746 aa7.8□□□□□ -1.16
CAPN3-218ENST00000568153 CRB1P82279 1406 aa7.79□□□□□ -1.16
CAPN3-218ENST00000568153 KHNYNO15037 678 aaKnown RBP7.79□□□□□ -1.16
CAPN3-218ENST00000568153 ABL1P00519 1130 aa7.79□□□□□ -1.16
CAPN3-218ENST00000568153 BCRP11274 1271 aa7.79□□□□□ -1.16
CAPN3-218ENST00000568153 BRD2P25440 801 aaKnown RBP7.79□□□□□ -1.16
CAPN3-218ENST00000568153 ZNF211Q13398 564 aaPredicted RBP7.79□□□□□ -1.16
CAPN3-218ENST00000568153 ATF7IPQ6VMQ6 1270 aa7.79□□□□□ -1.16
CAPN3-218ENST00000568153 TOM1L2Q6ZVM7 507 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms