RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 CSRNP1Q96S65 589 aa10.07□□□□□ -0.8
HDGFL3-205ENST00000568129 DBNDD2Q9BQY9 259 aa10.07□□□□□ -0.8
HDGFL3-205ENST00000568129 IDI2Q9BXS1 227 aa10.07□□□□□ -0.8
HDGFL3-205ENST00000568129 MYH7P12883 1935 aa10.06□□□□□ -0.8
HDGFL3-205ENST00000568129 PPP1R12BO60237 982 aaPredicted RBP10.06□□□□□ -0.8
HDGFL3-205ENST00000568129 HMMRO75330 724 aa10.06□□□□□ -0.8
HDGFL3-205ENST00000568129 HSPA8P11142 646 aaKnown RBP10.06□□□□□ -0.8
HDGFL3-205ENST00000568129 DIXDC1Q155Q3 683 aa10.06□□□□□ -0.8
HDGFL3-205ENST00000568129 CCDC158Q5M9N0 1113 aa10.06□□□□□ -0.8
HDGFL3-205ENST00000568129 TMED8Q6PL24 325 aaPredicted RBP10.06□□□□□ -0.8
HDGFL3-205ENST00000568129 ERICH6Q7L0X2 663 aa10.06□□□□□ -0.8
HDGFL3-205ENST00000568129 SLF2Q8IX21 1173 aa10.06□□□□□ -0.8
HDGFL3-205ENST00000568129 FAM151AQ8WW52 585 aa10.06□□□□□ -0.8
HDGFL3-205ENST00000568129 NSUN4Q96CB9 384 aaKnown RBP10.06□□□□□ -0.8
HDGFL3-205ENST00000568129 TMEM39BQ9GZU3 492 aa10.06□□□□□ -0.8
HDGFL3-205ENST00000568129 VEZTQ9HBM0 779 aa10.06□□□□□ -0.8
HDGFL3-205ENST00000568129 SAGE1Q9NXZ1 904 aa10.06□□□□□ -0.8
HDGFL3-205ENST00000568129 FAM198AQ9UFP1 575 aa10.06□□□□□ -0.8
HDGFL3-205ENST00000568129 EXOC6BQ9Y2D4 811 aa10.06□□□□□ -0.8
HDGFL3-205ENST00000568129 TCP10L2B9ZVM9 353 aa10.05□□□□□ -0.8
HDGFL3-205ENST00000568129 CYP2E1P05181 493 aaPredicted RBP10.05□□□□□ -0.8
HDGFL3-205ENST00000568129 PPP4CP60510 307 aa10.05□□□□□ -0.8
HDGFL3-205ENST00000568129 KIF23Q02241 960 aaPredicted RBP10.05□□□□□ -0.8
HDGFL3-205ENST00000568129 MECOMQ03112 1051 aa10.05□□□□□ -0.8
HDGFL3-205ENST00000568129 OS9Q13438 667 aaPredicted RBP10.05□□□□□ -0.8
HDGFL3-205ENST00000568129 GORABQ5T7V8 394 aa10.05□□□□□ -0.8
HDGFL3-205ENST00000568129 COL13A1Q5TAT6 717 aaPredicted RBP10.05□□□□□ -0.8
HDGFL3-205ENST00000568129 SPRYD7Q5W111 196 aa10.05□□□□□ -0.8
HDGFL3-205ENST00000568129 PI16Q6UXB8 463 aa10.05□□□□□ -0.8
HDGFL3-205ENST00000568129 CDAN1Q8IWY9 1227 aa10.05□□□□□ -0.8
HDGFL3-205ENST00000568129 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.05□□□□□ -0.8
HDGFL3-205ENST00000568129 KIF1BPQ96EK5 621 aa10.05□□□□□ -0.8
HDGFL3-205ENST00000568129 CFHR5Q9BXR6 569 aa10.05□□□□□ -0.8
HDGFL3-205ENST00000568129 ZNF112Q9UJU3 913 aa10.05□□□□□ -0.8
HDGFL3-205ENST00000568129 ANGEL1Q9UNK9 670 aaKnown RBP10.05□□□□□ -0.8
HDGFL3-205ENST00000568129 PHIPQ8WWQ0 1821 aa10.05□□□□□ -0.8
HDGFL3-205ENST00000568129 MROH7-TTC4A0A0A0MT08 1334 aa10.05□□□□□ -0.8
HDGFL3-205ENST00000568129 ATRNL1Q5VV63 1379 aa10.04□□□□□ -0.8
HDGFL3-205ENST00000568129 MYH1P12882 1939 aa10.04□□□□□ -0.8
HDGFL3-205ENST00000568129 TESPA1A2RU30 521 aaPredicted RBP10.04□□□□□ -0.8
HDGFL3-205ENST00000568129 ENTPD3O75355 529 aa10.04□□□□□ -0.8
HDGFL3-205ENST00000568129 WDHD1O75717 1129 aaPredicted RBP10.04□□□□□ -0.8
HDGFL3-205ENST00000568129 LDHCP07864 332 aa10.04□□□□□ -0.8
HDGFL3-205ENST00000568129 ZBTB48P10074 688 aaPredicted RBP10.04□□□□□ -0.8
HDGFL3-205ENST00000568129 IREB2P48200 963 aaKnown RBP10.04□□□□□ -0.8
HDGFL3-205ENST00000568129 CACNB3P54284 484 aa10.04□□□□□ -0.8
HDGFL3-205ENST00000568129 RRP1P56182 461 aaKnown RBP10.04□□□□□ -0.8
HDGFL3-205ENST00000568129 INHBEP58166 350 aa10.04□□□□□ -0.8
HDGFL3-205ENST00000568129 RHBDL3P58872 404 aa10.04□□□□□ -0.8
HDGFL3-205ENST00000568129 NOM1Q5C9Z4 860 aaKnown RBP10.04□□□□□ -0.8
HDGFL3-205ENST00000568129 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.04□□□□□ -0.8
HDGFL3-205ENST00000568129 PAXIP1Q6ZW49 1069 aaPredicted RBP10.04□□□□□ -0.8
HDGFL3-205ENST00000568129 ANKRD13AQ8IZ07 590 aa10.04□□□□□ -0.8
HDGFL3-205ENST00000568129 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.04□□□□□ -0.8
HDGFL3-205ENST00000568129 AIDAQ96BJ3 306 aa10.04□□□□□ -0.8
HDGFL3-205ENST00000568129 HOOK2Q96ED9 719 aa10.04□□□□□ -0.8
HDGFL3-205ENST00000568129 CCDC8Q9H0W5 538 aaPredicted RBP10.04□□□□□ -0.8
HDGFL3-205ENST00000568129 DCTPP1Q9H773 170 aa10.04□□□□□ -0.8
HDGFL3-205ENST00000568129 USP40Q9NVE5 1235 aa10.04□□□□□ -0.8
HDGFL3-205ENST00000568129 TLR7Q9NYK1 1049 aaKnown RBP10.04□□□□□ -0.8
HDGFL3-205ENST00000568129 TMOD2Q9NZR1 351 aa10.04□□□□□ -0.8
HDGFL3-205ENST00000568129 ABCF2Q9UG63 623 aa10.04□□□□□ -0.8
HDGFL3-205ENST00000568129 COL2A1P02458 1487 aaPredicted RBP10.04□□□□□ -0.8
HDGFL3-205ENST00000568129 PTPRFP10586 1907 aa10.03□□□□□ -0.8
HDGFL3-205ENST00000568129 SIPA1L1O43166 1804 aa10.03□□□□□ -0.8
HDGFL3-205ENST00000568129 GSTO1P78417 241 aa10.03□□□□□ -0.8
HDGFL3-205ENST00000568129 MAP3K9P80192 1104 aa10.03□□□□□ -0.8
HDGFL3-205ENST00000568129 NFIAQ12857 509 aa10.03□□□□□ -0.8
HDGFL3-205ENST00000568129 TTC39AQ5SRH9 613 aa10.03□□□□□ -0.8
HDGFL3-205ENST00000568129 TBC1D9Q6ZT07 1266 aa10.03□□□□□ -0.8
HDGFL3-205ENST00000568129 DZIP1Q86YF9 867 aaKnown RBP10.03□□□□□ -0.8
HDGFL3-205ENST00000568129 CLASRPQ8N2M8 674 aaKnown RBP10.03□□□□□ -0.8
HDGFL3-205ENST00000568129 SLC10A4Q96EP9 437 aa10.03□□□□□ -0.8
HDGFL3-205ENST00000568129 RNF186Q9NXI6 227 aa10.03□□□□□ -0.8
HDGFL3-205ENST00000568129 FZD1Q9UP38 647 aa10.03□□□□□ -0.8
HDGFL3-205ENST00000568129 TBC1D12O60347 775 aa10.02□□□□□ -0.81
HDGFL3-205ENST00000568129 GJA5P36382 358 aa10.02□□□□□ -0.81
HDGFL3-205ENST00000568129 BTDP43251 543 aa10.02□□□□□ -0.81
HDGFL3-205ENST00000568129 ZAP70P43403 619 aa10.02□□□□□ -0.81
HDGFL3-205ENST00000568129 LBX1P52954 281 aa10.02□□□□□ -0.81
HDGFL3-205ENST00000568129 AAMPQ13685 434 aa10.02□□□□□ -0.81
HDGFL3-205ENST00000568129 TTLL12Q14166 644 aaPredicted RBP10.02□□□□□ -0.81
HDGFL3-205ENST00000568129 SH3BP5LQ7L8J4 393 aa10.02□□□□□ -0.81
HDGFL3-205ENST00000568129 AACSQ86V21 672 aa10.02□□□□□ -0.81
HDGFL3-205ENST00000568129 ZFPM1Q8IX07 1006 aa10.02□□□□□ -0.81
HDGFL3-205ENST00000568129 WNK4Q96J92 1243 aa10.02□□□□□ -0.81
HDGFL3-205ENST00000568129 CLMNQ96JQ2 1002 aa10.02□□□□□ -0.81
HDGFL3-205ENST00000568129 BEGAINQ9BUH8 593 aa10.02□□□□□ -0.81
HDGFL3-205ENST00000568129 PCDHB15Q9Y5E8 787 aa10.02□□□□□ -0.81
HDGFL3-205ENST00000568129 ATAD5Q96QE3 1844 aa10.01□□□□□ -0.81
HDGFL3-205ENST00000568129 MANSC4A6NHS7 340 aaPredicted RBP10.01□□□□□ -0.81
HDGFL3-205ENST00000568129 PHF20L1A8MW92 1017 aa10.01□□□□□ -0.81
HDGFL3-205ENST00000568129 GRM1Q13255 1194 aa10.01□□□□□ -0.81
HDGFL3-205ENST00000568129 PRKG1Q13976 671 aa10.01□□□□□ -0.81
HDGFL3-205ENST00000568129 NOL9Q5SY16 702 aaKnown RBP10.01□□□□□ -0.81
HDGFL3-205ENST00000568129 DCAF15Q66K64 600 aa10.01□□□□□ -0.81
HDGFL3-205ENST00000568129 METTL16Q86W50 562 aaKnown RBP10.01□□□□□ -0.81
HDGFL3-205ENST00000568129 MS4A4AQ96JQ5 239 aa10.01□□□□□ -0.81
HDGFL3-205ENST00000568129 IL1RAPL2Q9NP60 686 aa10.01□□□□□ -0.81
HDGFL3-205ENST00000568129 DDX4Q9NQI0 724 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms