RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 TFCP2Q12800 502 aa13.79□□□□□ -0.2
CDH3-206ENST00000567674 DCAF15Q66K64 600 aa13.79□□□□□ -0.2
CDH3-206ENST00000567674 RPAP2Q8IXW5 612 aaPredicted RBP13.79□□□□□ -0.2
CDH3-206ENST00000567674 IDI2Q9BXS1 227 aa13.79□□□□□ -0.2
CDH3-206ENST00000567674 IQSEC3Q9UPP2 1182 aaPredicted RBP13.79□□□□□ -0.2
CDH3-206ENST00000567674 JAG2Q9Y219 1238 aa13.79□□□□□ -0.2
CDH3-206ENST00000567674 GAKO14976 1311 aa13.79□□□□□ -0.2
CDH3-206ENST00000567674 PNMA6EA0A0J9YXQ4 647 aa13.78□□□□□ -0.2
CDH3-206ENST00000567674 ENTPD3O75355 529 aa13.78□□□□□ -0.2
CDH3-206ENST00000567674 PHKA1P46020 1223 aa13.78□□□□□ -0.2
CDH3-206ENST00000567674 CCDC158Q5M9N0 1113 aa13.78□□□□□ -0.2
CDH3-206ENST00000567674 MOB2Q70IA6 237 aa13.78□□□□□ -0.2
CDH3-206ENST00000567674 ITPRIPQ8IWB1 547 aa13.78□□□□□ -0.2
CDH3-206ENST00000567674 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.78□□□□□ -0.2
CDH3-206ENST00000567674 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.78□□□□□ -0.2
CDH3-206ENST00000567674 DDX19BQ9UMR2 479 aa13.78□□□□□ -0.2
CDH3-206ENST00000567674 DAGLAQ9Y4D2 1042 aa13.78□□□□□ -0.2
CDH3-206ENST00000567674 AKAP11Q9UKA4 1901 aa13.78□□□□□ -0.2
CDH3-206ENST00000567674 SSC5DA1L4H1 1573 aa13.77□□□□□ -0.21
CDH3-206ENST00000567674 LAMB1P07942 1786 aa13.77□□□□□ -0.21
CDH3-206ENST00000567674 MAP3K10Q02779 954 aa13.77□□□□□ -0.21
CDH3-206ENST00000567674 RASGRF1Q13972 1273 aa13.77□□□□□ -0.21
CDH3-206ENST00000567674 PDE3AQ14432 1141 aa13.77□□□□□ -0.21
CDH3-206ENST00000567674 GRIK5Q16478 980 aa13.77□□□□□ -0.21
CDH3-206ENST00000567674 GORABQ5T7V8 394 aa13.77□□□□□ -0.21
CDH3-206ENST00000567674 CERS3Q8IU89 383 aa13.77□□□□□ -0.21
CDH3-206ENST00000567674 WNK4Q96J92 1243 aa13.77□□□□□ -0.21
CDH3-206ENST00000567674 PCDHAC2Q9Y5I4 1007 aa13.77□□□□□ -0.21
CDH3-206ENST00000567674 CSADQ9Y600 493 aa13.77□□□□□ -0.21
CDH3-206ENST00000567674 TCP10L2B9ZVM9 353 aa13.76□□□□□ -0.21
CDH3-206ENST00000567674 PRDX5P30044 214 aa13.76□□□□□ -0.21
CDH3-206ENST00000567674 ERICH6Q7L0X2 663 aa13.76□□□□□ -0.21
CDH3-206ENST00000567674 SPATA5Q8NB90 893 aa13.76□□□□□ -0.21
CDH3-206ENST00000567674 NEUROD6Q96NK8 337 aa13.76□□□□□ -0.21
CDH3-206ENST00000567674 TMEM39BQ9GZU3 492 aa13.76□□□□□ -0.21
CDH3-206ENST00000567674 ZNF112Q9UJU3 913 aa13.76□□□□□ -0.21
CDH3-206ENST00000567674 SCAF8Q9UPN6 1271 aaKnown RBP13.76□□□□□ -0.21
CDH3-206ENST00000567674 GPR75-ASB3A0A0A6YYF3 556 aa13.75□□□□□ -0.21
CDH3-206ENST00000567674 HMMRO75330 724 aa13.75□□□□□ -0.21
CDH3-206ENST00000567674 SURF6O75683 361 aaKnown RBP13.75□□□□□ -0.21
CDH3-206ENST00000567674 WDHD1O75717 1129 aaPredicted RBP13.75□□□□□ -0.21
CDH3-206ENST00000567674 FXR1P51114 621 aaKnown RBP eCLIP13.75□□□□□ -0.21
CDH3-206ENST00000567674 GTF2A2P52657 109 aa13.75□□□□□ -0.21
CDH3-206ENST00000567674 CDC42EP5Q6NZY7 148 aa13.75□□□□□ -0.21
CDH3-206ENST00000567674 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.75□□□□□ -0.21
CDH3-206ENST00000567674 ERO1BQ86YB8 467 aa13.75□□□□□ -0.21
CDH3-206ENST00000567674 DZIP1Q86YF9 867 aaKnown RBP13.75□□□□□ -0.21
CDH3-206ENST00000567674 IFNL1Q8IU54 200 aa13.75□□□□□ -0.21
CDH3-206ENST00000567674 ZNF341Q9BYN7 854 aa13.75□□□□□ -0.21
CDH3-206ENST00000567674 RCAN3Q9UKA8 241 aa13.75□□□□□ -0.21
CDH3-206ENST00000567674 MYH13Q9UKX3 1938 aa13.74□□□□□ -0.21
CDH3-206ENST00000567674 RLBP1P12271 317 aa13.74□□□□□ -0.21
CDH3-206ENST00000567674 ADORA1P30542 326 aa13.74□□□□□ -0.21
CDH3-206ENST00000567674 PPATQ06203 517 aa13.74□□□□□ -0.21
CDH3-206ENST00000567674 TNNI3KQ59H18 835 aa13.74□□□□□ -0.21
CDH3-206ENST00000567674 CEP85Q6P2H3 762 aa13.74□□□□□ -0.21
CDH3-206ENST00000567674 USP40Q9NVE5 1235 aa13.74□□□□□ -0.21
CDH3-206ENST00000567674 HMG20BQ9P0W2 317 aa13.74□□□□□ -0.21
CDH3-206ENST00000567674 FPGT-TNNI3KV9GXZ4 949 aa13.74□□□□□ -0.21
CDH3-206ENST00000567674 AOX1Q06278 1338 aa13.73□□□□□ -0.21
CDH3-206ENST00000567674 SPDYE5A6NIY4 337 aa13.73□□□□□ -0.21
CDH3-206ENST00000567674 TBC1D12O60347 775 aa13.73□□□□□ -0.21
CDH3-206ENST00000567674 PLCG2P16885 1265 aa13.73□□□□□ -0.21
CDH3-206ENST00000567674 PRKG1Q13976 671 aa13.73□□□□□ -0.21
CDH3-206ENST00000567674 ARHGEF6Q15052 776 aa13.73□□□□□ -0.21
CDH3-206ENST00000567674 NOL9Q5SY16 702 aaKnown RBP13.73□□□□□ -0.21
CDH3-206ENST00000567674 MS4A4AQ96JQ5 239 aa13.73□□□□□ -0.21
CDH3-206ENST00000567674 ZBTB40Q9NUA8 1239 aa13.73□□□□□ -0.21
CDH3-206ENST00000567674 ABCF2Q9UG63 623 aa13.73□□□□□ -0.21
CDH3-206ENST00000567674 TNNQ9UQP3 1299 aa13.73□□□□□ -0.21
CDH3-206ENST00000567674 COL2A1P02458 1487 aaPredicted RBP13.73□□□□□ -0.21
CDH3-206ENST00000567674 MROH7-TTC4A0A0A0MT08 1334 aa13.72□□□□□ -0.21
CDH3-206ENST00000567674 GPR25O00155 361 aa13.72□□□□□ -0.21
CDH3-206ENST00000567674 RAB11FIP3O75154 756 aa13.72□□□□□ -0.21
CDH3-206ENST00000567674 BAG3O95817 575 aa13.72□□□□□ -0.21
CDH3-206ENST00000567674 PPP4CP60510 307 aa13.72□□□□□ -0.21
CDH3-206ENST00000567674 MECOMQ03112 1051 aa13.72□□□□□ -0.21
CDH3-206ENST00000567674 OS9Q13438 667 aaPredicted RBP13.72□□□□□ -0.21
CDH3-206ENST00000567674 VGLL4Q14135 290 aa13.72□□□□□ -0.21
CDH3-206ENST00000567674 NSUN4Q96CB9 384 aaKnown RBP13.72□□□□□ -0.21
CDH3-206ENST00000567674 OPTNQ96CV9 577 aa13.72□□□□□ -0.21
CDH3-206ENST00000567674 TBC1D2Q9BYX2 928 aa13.72□□□□□ -0.21
CDH3-206ENST00000567674 FKTNO75072 461 aa13.71□□□□□ -0.21
CDH3-206ENST00000567674 CETPP11597 493 aa13.71□□□□□ -0.21
CDH3-206ENST00000567674 PPIL2Q13356 520 aa13.71□□□□□ -0.21
CDH3-206ENST00000567674 DIXDC1Q155Q3 683 aa13.71□□□□□ -0.21
CDH3-206ENST00000567674 TTC39AQ5SRH9 613 aa13.71□□□□□ -0.21
CDH3-206ENST00000567674 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.71□□□□□ -0.21
CDH3-206ENST00000567674 CLMNQ96JQ2 1002 aa13.71□□□□□ -0.21
CDH3-206ENST00000567674 WRNIP1Q96S55 665 aa13.71□□□□□ -0.21
CDH3-206ENST00000567674 DHX36Q9H2U1 1008 aaKnown RBP13.71□□□□□ -0.21
CDH3-206ENST00000567674 FAM198AQ9UFP1 575 aa13.71□□□□□ -0.21
CDH3-206ENST00000567674 RFX7Q2KHR2 1363 aa13.71□□□□□ -0.22
CDH3-206ENST00000567674 ATRNL1Q5VV63 1379 aa13.71□□□□□ -0.22
CDH3-206ENST00000567674 MCAMP43121 646 aa13.7□□□□□ -0.22
CDH3-206ENST00000567674 SNAPC2Q13487 334 aa13.7□□□□□ -0.22
CDH3-206ENST00000567674 FBXO46Q6PJ61 603 aaPredicted RBP13.7□□□□□ -0.22
CDH3-206ENST00000567674 KIF1BPQ96EK5 621 aa13.7□□□□□ -0.22
CDH3-206ENST00000567674 NOL10Q9BSC4 688 aaKnown RBP13.7□□□□□ -0.22
CDH3-206ENST00000567674 GINM1Q9NU53 330 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms