RNA–Protein interactions for RNA: ENST00000567638.1

SCAMP2-209, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-209ENST00000567638 PTPN18Q99952 460 aa18.68■□□□□ 0.58
SCAMP2-209ENST00000567638 CRHR2Q13324 411 aa18.67■□□□□ 0.58
SCAMP2-209ENST00000567638 CDC42EP5Q6NZY7 148 aa18.67■□□□□ 0.58
SCAMP2-209ENST00000567638 CLUAP1Q96AJ1 413 aa18.67■□□□□ 0.58
SCAMP2-209ENST00000567638 OTUD5Q96G74 571 aa18.67■□□□□ 0.58
SCAMP2-209ENST00000567638 WRNIP1Q96S55 665 aa18.67■□□□□ 0.58
SCAMP2-209ENST00000567638 SNCAIPQ9Y6H5 919 aa18.67■□□□□ 0.58
SCAMP2-209ENST00000567638 A0A1B0GUL7 405 aa18.66■□□□□ 0.58
SCAMP2-209ENST00000567638 SPDYE5A6NIY4 337 aa18.66■□□□□ 0.58
SCAMP2-209ENST00000567638 GNAI2P04899 355 aa18.66■□□□□ 0.58
SCAMP2-209ENST00000567638 TIMM10P62072 90 aa18.66■□□□□ 0.58
SCAMP2-209ENST00000567638 TFCP2Q12800 502 aa18.66■□□□□ 0.58
SCAMP2-209ENST00000567638 DCAF15Q66K64 600 aa18.66■□□□□ 0.58
SCAMP2-209ENST00000567638 MIER1Q8N108 512 aa18.66■□□□□ 0.58
SCAMP2-209ENST00000567638 ZGPATQ8N5A5 531 aaKnown RBP18.66■□□□□ 0.58
SCAMP2-209ENST00000567638 FAM151AQ8WW52 585 aa18.66■□□□□ 0.58
SCAMP2-209ENST00000567638 AKAP2Q9Y2D5 859 aa18.66■□□□□ 0.58
SCAMP2-209ENST00000567638 PDS5AQ29RF7 1337 aaKnown RBP18.66■□□□□ 0.58
SCAMP2-209ENST00000567638 GTF2A2P52657 109 aa18.65■□□□□ 0.58
SCAMP2-209ENST00000567638 HNRNPUQ00839 825 aaKnown RBP eCLIP18.65■□□□□ 0.58
SCAMP2-209ENST00000567638 RASGRF1Q13972 1273 aa18.65■□□□□ 0.58
SCAMP2-209ENST00000567638 ZKSCAN2Q63HK3 967 aa18.65■□□□□ 0.58
SCAMP2-209ENST00000567638 BRI3BPQ8WY22 251 aa18.65■□□□□ 0.58
SCAMP2-209ENST00000567638 CCL15-CCL14A0A0B4J2E2 113 aa18.64■□□□□ 0.57
SCAMP2-209ENST00000567638 NFIAQ12857 509 aa18.64■□□□□ 0.57
SCAMP2-209ENST00000567638 MVPQ14764 893 aaKnown RBP18.64■□□□□ 0.57
SCAMP2-209ENST00000567638 CCL15Q16663 113 aa18.64■□□□□ 0.57
SCAMP2-209ENST00000567638 ERO1BQ86YB8 467 aa18.64■□□□□ 0.57
SCAMP2-209ENST00000567638 ZKSCAN4Q969J2 545 aaPredicted RBP18.64■□□□□ 0.57
SCAMP2-209ENST00000567638 XAGE2Q96GT9 111 aa18.64■□□□□ 0.57
SCAMP2-209ENST00000567638 ERO1AQ96HE7 468 aa18.64■□□□□ 0.57
SCAMP2-209ENST00000567638 ZNF341Q9BYN7 854 aa18.64■□□□□ 0.57
SCAMP2-209ENST00000567638 RBBP6Q7Z6E9 1792 aaKnown RBP18.63■□□□□ 0.57
SCAMP2-209ENST00000567638 PNMA6EA0A0J9YXQ4 647 aa18.63■□□□□ 0.57
SCAMP2-209ENST00000567638 TCP10Q12799 353 aa18.63■□□□□ 0.57
SCAMP2-209ENST00000567638 OTOP1Q7RTM1 612 aa18.63■□□□□ 0.57
SCAMP2-209ENST00000567638 TMEM57Q8N5G2 664 aa18.63■□□□□ 0.57
SCAMP2-209ENST00000567638 USP40Q9NVE5 1235 aa18.63■□□□□ 0.57
SCAMP2-209ENST00000567638 FAM198AQ9UFP1 575 aa18.63■□□□□ 0.57
SCAMP2-209ENST00000567638 TRIM17Q9Y577 477 aa18.63■□□□□ 0.57
SCAMP2-209ENST00000567638 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.63■□□□□ 0.57
SCAMP2-209ENST00000567638 GAKO14976 1311 aa18.63■□□□□ 0.57
SCAMP2-209ENST00000567638 TAF1CQ15572 869 aaPredicted RBP18.62■□□□□ 0.57
SCAMP2-209ENST00000567638 DIEXFQ68CQ4 756 aaKnown RBP18.62■□□□□ 0.57
SCAMP2-209ENST00000567638 MIGA2Q7L4E1 593 aa18.62■□□□□ 0.57
SCAMP2-209ENST00000567638 DZIP1Q86YF9 867 aaKnown RBP18.62■□□□□ 0.57
SCAMP2-209ENST00000567638 ABCF2Q9UG63 623 aa18.62■□□□□ 0.57
SCAMP2-209ENST00000567638 RFX7Q2KHR2 1363 aa18.62■□□□□ 0.57
SCAMP2-209ENST00000567638 MAST2Q6P0Q8 1798 aa18.62■□□□□ 0.57
SCAMP2-209ENST00000567638 DOCK1Q14185 1865 aa18.61■□□□□ 0.57
SCAMP2-209ENST00000567638 ZSWIM8A7E2V4 1837 aa18.61■□□□□ 0.57
SCAMP2-209ENST00000567638 CETPP11597 493 aa18.61■□□□□ 0.57
SCAMP2-209ENST00000567638 INPP5BP32019 993 aa18.61■□□□□ 0.57
SCAMP2-209ENST00000567638 SP3Q02447 781 aa18.61■□□□□ 0.57
SCAMP2-209ENST00000567638 PPIL2Q13356 520 aa18.61■□□□□ 0.57
SCAMP2-209ENST00000567638 FAM43AQ8N2R8 423 aa18.61■□□□□ 0.57
SCAMP2-209ENST00000567638 CD99L2Q8TCZ2 262 aa18.61■□□□□ 0.57
SCAMP2-209ENST00000567638 NEUROD6Q96NK8 337 aa18.61■□□□□ 0.57
SCAMP2-209ENST00000567638 PTPRFP10586 1907 aa18.61■□□□□ 0.57
SCAMP2-209ENST00000567638 IRF6O14896 467 aa18.6■□□□□ 0.57
SCAMP2-209ENST00000567638 PPATQ06203 517 aa18.6■□□□□ 0.57
SCAMP2-209ENST00000567638 SPTY2D1Q68D10 685 aaPredicted RBP18.6■□□□□ 0.57
SCAMP2-209ENST00000567638 SLF2Q8IX21 1173 aa18.6■□□□□ 0.57
SCAMP2-209ENST00000567638 IDI2Q9BXS1 227 aa18.6■□□□□ 0.57
SCAMP2-209ENST00000567638 ZFYVE28Q9HCC9 887 aa18.6■□□□□ 0.57
SCAMP2-209ENST00000567638 ZNF112Q9UJU3 913 aa18.6■□□□□ 0.57
SCAMP2-209ENST00000567638 MYO5AQ9Y4I1 1855 aaKnown RBP18.6■□□□□ 0.57
SCAMP2-209ENST00000567638 ATRNL1Q5VV63 1379 aa18.59■□□□□ 0.57
SCAMP2-209ENST00000567638 PHIPQ8WWQ0 1821 aa18.59■□□□□ 0.57
SCAMP2-209ENST00000567638 RGS3P49796 1198 aa18.59■□□□□ 0.57
SCAMP2-209ENST00000567638 G3BP1Q13283 466 aaKnown RBP eCLIP18.59■□□□□ 0.57
SCAMP2-209ENST00000567638 SNAPC2Q13487 334 aa18.59■□□□□ 0.57
SCAMP2-209ENST00000567638 FAM163AQ96GL9 167 aaPredicted RBP18.59■□□□□ 0.57
SCAMP2-209ENST00000567638 ZCCHC17Q9NP64 241 aaKnown RBP18.59■□□□□ 0.57
SCAMP2-209ENST00000567638 PDE4DIPQ5VU43 2346 aa18.58■□□□□ 0.57
SCAMP2-209ENST00000567638 CDK5RAP2Q96SN8 1893 aa18.58■□□□□ 0.57
SCAMP2-209ENST00000567638 MROH7-TTC4A0A0A0MT08 1334 aa18.58■□□□□ 0.57
SCAMP2-209ENST00000567638 ENTPD3O75355 529 aa18.58■□□□□ 0.56
SCAMP2-209ENST00000567638 ARID4AP29374 1257 aaPredicted RBP18.58■□□□□ 0.56
SCAMP2-209ENST00000567638 NOL9Q5SY16 702 aaKnown RBP18.58■□□□□ 0.56
SCAMP2-209ENST00000567638 GORABQ5T7V8 394 aa18.58■□□□□ 0.56
SCAMP2-209ENST00000567638 ZFPM1Q8IX07 1006 aa18.58■□□□□ 0.56
SCAMP2-209ENST00000567638 HMG20BQ9P0W2 317 aa18.58■□□□□ 0.56
SCAMP2-209ENST00000567638 ATAD5Q96QE3 1844 aa18.58■□□□□ 0.56
SCAMP2-209ENST00000567638 TNRC18O15417 2968 aaPredicted RBP18.57■□□□□ 0.56
SCAMP2-209ENST00000567638 BTBD19C9JJ37 291 aa18.57■□□□□ 0.56
SCAMP2-209ENST00000567638 WDHD1O75717 1129 aaPredicted RBP18.57■□□□□ 0.56
SCAMP2-209ENST00000567638 BTDP43251 543 aa18.57■□□□□ 0.56
SCAMP2-209ENST00000567638 CAP1Q01518 475 aa18.57■□□□□ 0.56
SCAMP2-209ENST00000567638 MECOMQ03112 1051 aa18.57■□□□□ 0.56
SCAMP2-209ENST00000567638 POLA2Q14181 598 aa18.57■□□□□ 0.56
SCAMP2-209ENST00000567638 PI16Q6UXB8 463 aa18.57■□□□□ 0.56
SCAMP2-209ENST00000567638 ERICH6Q7L0X2 663 aa18.57■□□□□ 0.56
SCAMP2-209ENST00000567638 FTSJ3Q8IY81 847 aaKnown RBP18.57■□□□□ 0.56
SCAMP2-209ENST00000567638 SPATA5Q8NB90 893 aa18.57■□□□□ 0.56
SCAMP2-209ENST00000567638 EFCC1Q9HA90 598 aa18.57■□□□□ 0.56
SCAMP2-209ENST00000567638 PTPN22Q9Y2R2 807 aa18.57■□□□□ 0.56
SCAMP2-209ENST00000567638 FOCADQ5VW36 1801 aa18.57■□□□□ 0.56
SCAMP2-209ENST00000567638 SSH3Q8TE77 659 aa18.56■□□□□ 0.56
SCAMP2-209ENST00000567638 ZNF384Q8TF68 577 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms