RNA–Protein interactions for RNA: ENST00000566723.1

SMPD3-208, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-208ENST00000566723 CRHR2Q13324 411 aa18.85■□□□□ 0.61
SMPD3-208ENST00000566723 CCDC102BQ68D86 513 aa18.85■□□□□ 0.61
SMPD3-208ENST00000566723 FRAT1Q92837 279 aaPredicted RBP18.85■□□□□ 0.61
SMPD3-208ENST00000566723 MS4A4AQ96JQ5 239 aa18.85■□□□□ 0.61
SMPD3-208ENST00000566723 WRNIP1Q96S55 665 aa18.85■□□□□ 0.61
SMPD3-208ENST00000566723 PTPN18Q99952 460 aa18.85■□□□□ 0.61
SMPD3-208ENST00000566723 TNNQ9UQP3 1299 aa18.85■□□□□ 0.61
SMPD3-208ENST00000566723 PDS5AQ29RF7 1337 aaKnown RBP18.84■□□□□ 0.61
SMPD3-208ENST00000566723 SPDYE5A6NIY4 337 aa18.84■□□□□ 0.61
SMPD3-208ENST00000566723 DCAF15Q66K64 600 aa18.84■□□□□ 0.61
SMPD3-208ENST00000566723 ZGPATQ8N5A5 531 aaKnown RBP18.84■□□□□ 0.61
SMPD3-208ENST00000566723 BRI3BPQ8WY22 251 aa18.84■□□□□ 0.61
SMPD3-208ENST00000566723 OTUD5Q96G74 571 aa18.84■□□□□ 0.61
SMPD3-208ENST00000566723 SNCAIPQ9Y6H5 919 aa18.84■□□□□ 0.61
SMPD3-208ENST00000566723 GNAI2P04899 355 aa18.83■□□□□ 0.6
SMPD3-208ENST00000566723 GTF2A2P52657 109 aa18.83■□□□□ 0.6
SMPD3-208ENST00000566723 RASGRF1Q13972 1273 aa18.83■□□□□ 0.6
SMPD3-208ENST00000566723 CDC42EP5Q6NZY7 148 aa18.83■□□□□ 0.6
SMPD3-208ENST00000566723 FAM151AQ8WW52 585 aa18.83■□□□□ 0.6
SMPD3-208ENST00000566723 AKAP2Q9Y2D5 859 aa18.83■□□□□ 0.6
SMPD3-208ENST00000566723 CCL15-CCL14A0A0B4J2E2 113 aa18.82■□□□□ 0.6
SMPD3-208ENST00000566723 A0A1B0GUL7 405 aa18.82■□□□□ 0.6
SMPD3-208ENST00000566723 HNRNPUQ00839 825 aaKnown RBP eCLIP18.82■□□□□ 0.6
SMPD3-208ENST00000566723 TFCP2Q12800 502 aa18.82■□□□□ 0.6
SMPD3-208ENST00000566723 CCL15Q16663 113 aa18.82■□□□□ 0.6
SMPD3-208ENST00000566723 CLUAP1Q96AJ1 413 aa18.82■□□□□ 0.6
SMPD3-208ENST00000566723 ERO1AQ96HE7 468 aa18.82■□□□□ 0.6
SMPD3-208ENST00000566723 ZNF341Q9BYN7 854 aa18.82■□□□□ 0.6
SMPD3-208ENST00000566723 GAKO14976 1311 aa18.81■□□□□ 0.6
SMPD3-208ENST00000566723 TIMM10P62072 90 aa18.81■□□□□ 0.6
SMPD3-208ENST00000566723 TCP10Q12799 353 aa18.81■□□□□ 0.6
SMPD3-208ENST00000566723 NFIAQ12857 509 aa18.81■□□□□ 0.6
SMPD3-208ENST00000566723 MVPQ14764 893 aaKnown RBP18.81■□□□□ 0.6
SMPD3-208ENST00000566723 ERO1BQ86YB8 467 aa18.81■□□□□ 0.6
SMPD3-208ENST00000566723 ZKSCAN4Q969J2 545 aaPredicted RBP18.81■□□□□ 0.6
SMPD3-208ENST00000566723 XAGE2Q96GT9 111 aa18.81■□□□□ 0.6
SMPD3-208ENST00000566723 TRIM17Q9Y577 477 aa18.81■□□□□ 0.6
SMPD3-208ENST00000566723 RFX7Q2KHR2 1363 aa18.81■□□□□ 0.6
SMPD3-208ENST00000566723 ZKSCAN2Q63HK3 967 aa18.8■□□□□ 0.6
SMPD3-208ENST00000566723 OTOP1Q7RTM1 612 aa18.8■□□□□ 0.6
SMPD3-208ENST00000566723 DZIP1Q86YF9 867 aaKnown RBP18.8■□□□□ 0.6
SMPD3-208ENST00000566723 TMEM57Q8N5G2 664 aa18.8■□□□□ 0.6
SMPD3-208ENST00000566723 FAM198AQ9UFP1 575 aa18.8■□□□□ 0.6
SMPD3-208ENST00000566723 RBBP6Q7Z6E9 1792 aaKnown RBP18.8■□□□□ 0.6
SMPD3-208ENST00000566723 PNMA6EA0A0J9YXQ4 647 aa18.79■□□□□ 0.6
SMPD3-208ENST00000566723 PPIL2Q13356 520 aa18.79■□□□□ 0.6
SMPD3-208ENST00000566723 TAF1CQ15572 869 aaPredicted RBP18.79■□□□□ 0.6
SMPD3-208ENST00000566723 MIGA2Q7L4E1 593 aa18.79■□□□□ 0.6
SMPD3-208ENST00000566723 MIER1Q8N108 512 aa18.79■□□□□ 0.6
SMPD3-208ENST00000566723 CD99L2Q8TCZ2 262 aa18.79■□□□□ 0.6
SMPD3-208ENST00000566723 USP40Q9NVE5 1235 aa18.79■□□□□ 0.6
SMPD3-208ENST00000566723 ABCF2Q9UG63 623 aa18.79■□□□□ 0.6
SMPD3-208ENST00000566723 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.79■□□□□ 0.6
SMPD3-208ENST00000566723 KIAA0100Q14667 2235 aaKnown RBP18.78■□□□□ 0.6
SMPD3-208ENST00000566723 MAST2Q6P0Q8 1798 aa18.78■□□□□ 0.6
SMPD3-208ENST00000566723 DOCK1Q14185 1865 aa18.78■□□□□ 0.6
SMPD3-208ENST00000566723 IRF6O14896 467 aa18.78■□□□□ 0.6
SMPD3-208ENST00000566723 CETPP11597 493 aa18.78■□□□□ 0.6
SMPD3-208ENST00000566723 INPP5BP32019 993 aa18.78■□□□□ 0.6
SMPD3-208ENST00000566723 SP3Q02447 781 aa18.78■□□□□ 0.6
SMPD3-208ENST00000566723 SNAPC2Q13487 334 aa18.78■□□□□ 0.6
SMPD3-208ENST00000566723 SPTY2D1Q68D10 685 aaPredicted RBP18.78■□□□□ 0.6
SMPD3-208ENST00000566723 FAM43AQ8N2R8 423 aa18.78■□□□□ 0.6
SMPD3-208ENST00000566723 ZNF112Q9UJU3 913 aa18.78■□□□□ 0.6
SMPD3-208ENST00000566723 PTPRFP10586 1907 aa18.78■□□□□ 0.6
SMPD3-208ENST00000566723 ZSWIM8A7E2V4 1837 aa18.77■□□□□ 0.6
SMPD3-208ENST00000566723 PPATQ06203 517 aa18.77■□□□□ 0.6
SMPD3-208ENST00000566723 DIEXFQ68CQ4 756 aaKnown RBP18.77■□□□□ 0.6
SMPD3-208ENST00000566723 SLF2Q8IX21 1173 aa18.77■□□□□ 0.6
SMPD3-208ENST00000566723 NEUROD6Q96NK8 337 aa18.77■□□□□ 0.6
SMPD3-208ENST00000566723 IDI2Q9BXS1 227 aa18.77■□□□□ 0.6
SMPD3-208ENST00000566723 ZFYVE28Q9HCC9 887 aa18.77■□□□□ 0.6
SMPD3-208ENST00000566723 ZCCHC17Q9NP64 241 aaKnown RBP18.77■□□□□ 0.6
SMPD3-208ENST00000566723 ATRNL1Q5VV63 1379 aa18.77■□□□□ 0.6
SMPD3-208ENST00000566723 BRCA2P51587 3418 aa18.77■□□□□ 0.59
SMPD3-208ENST00000566723 RGS3P49796 1198 aa18.76■□□□□ 0.59
SMPD3-208ENST00000566723 G3BP1Q13283 466 aaKnown RBP eCLIP18.76■□□□□ 0.59
SMPD3-208ENST00000566723 FAM163AQ96GL9 167 aaPredicted RBP18.76■□□□□ 0.59
SMPD3-208ENST00000566723 EFCC1Q9HA90 598 aa18.76■□□□□ 0.59
SMPD3-208ENST00000566723 MROH7-TTC4A0A0A0MT08 1334 aa18.75■□□□□ 0.59
SMPD3-208ENST00000566723 MYO5AQ9Y4I1 1855 aaKnown RBP18.75■□□□□ 0.59
SMPD3-208ENST00000566723 PHIPQ8WWQ0 1821 aa18.75■□□□□ 0.59
SMPD3-208ENST00000566723 BTBD19C9JJ37 291 aa18.75■□□□□ 0.59
SMPD3-208ENST00000566723 ENTPD3O75355 529 aa18.75■□□□□ 0.59
SMPD3-208ENST00000566723 WDHD1O75717 1129 aaPredicted RBP18.75■□□□□ 0.59
SMPD3-208ENST00000566723 NOL9Q5SY16 702 aaKnown RBP18.75■□□□□ 0.59
SMPD3-208ENST00000566723 GORABQ5T7V8 394 aa18.75■□□□□ 0.59
SMPD3-208ENST00000566723 ERICH6Q7L0X2 663 aa18.75■□□□□ 0.59
SMPD3-208ENST00000566723 ZFPM1Q8IX07 1006 aa18.75■□□□□ 0.59
SMPD3-208ENST00000566723 MKI67P46013 3256 aaKnown RBP18.75■□□□□ 0.59
SMPD3-208ENST00000566723 CDK5RAP2Q96SN8 1893 aa18.74■□□□□ 0.59
SMPD3-208ENST00000566723 ARID4AP29374 1257 aaPredicted RBP18.74■□□□□ 0.59
SMPD3-208ENST00000566723 BTDP43251 543 aa18.74■□□□□ 0.59
SMPD3-208ENST00000566723 CAP1Q01518 475 aa18.74■□□□□ 0.59
SMPD3-208ENST00000566723 FTSJ3Q8IY81 847 aaKnown RBP18.74■□□□□ 0.59
SMPD3-208ENST00000566723 SPATA5Q8NB90 893 aa18.74■□□□□ 0.59
SMPD3-208ENST00000566723 HMG20BQ9P0W2 317 aa18.74■□□□□ 0.59
SMPD3-208ENST00000566723 PTPN22Q9Y2R2 807 aa18.74■□□□□ 0.59
SMPD3-208ENST00000566723 ATAD5Q96QE3 1844 aa18.73■□□□□ 0.59
SMPD3-208ENST00000566723 MECOMQ03112 1051 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms