RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 WDHD1O75717 1129 aaPredicted RBP14.85□□□□□ -0.03
UBR1-206ENST00000566493 DCAF15Q66K64 600 aa14.85□□□□□ -0.03
UBR1-206ENST00000566493 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.85□□□□□ -0.03
UBR1-206ENST00000566493 CCL15-CCL14A0A0B4J2E2 113 aa14.84□□□□□ -0.03
UBR1-206ENST00000566493 SP3Q02447 781 aa14.84□□□□□ -0.03
UBR1-206ENST00000566493 CCL15Q16663 113 aa14.84□□□□□ -0.03
UBR1-206ENST00000566493 OTOP1Q7RTM1 612 aa14.84□□□□□ -0.03
UBR1-206ENST00000566493 OTUD5Q96G74 571 aa14.84□□□□□ -0.03
UBR1-206ENST00000566493 WRNIP1Q96S55 665 aa14.84□□□□□ -0.03
UBR1-206ENST00000566493 PTPN18Q99952 460 aa14.84□□□□□ -0.03
UBR1-206ENST00000566493 DENND2AQ9ULE3 1009 aa14.84□□□□□ -0.03
UBR1-206ENST00000566493 SEMA3EO15041 775 aa14.83□□□□□ -0.04
UBR1-206ENST00000566493 LDHBP07195 334 aaKnown RBP14.83□□□□□ -0.04
UBR1-206ENST00000566493 GNAI3P08754 354 aa14.83□□□□□ -0.04
UBR1-206ENST00000566493 RARSP54136 660 aaKnown RBP14.83□□□□□ -0.04
UBR1-206ENST00000566493 CD99L2Q8TCZ2 262 aa14.83□□□□□ -0.04
UBR1-206ENST00000566493 ARHGAP45Q92619 1136 aa14.83□□□□□ -0.04
UBR1-206ENST00000566493 MS4A4AQ96JQ5 239 aa14.83□□□□□ -0.04
UBR1-206ENST00000566493 ZFYVE28Q9HCC9 887 aa14.83□□□□□ -0.04
UBR1-206ENST00000566493 AK9Q5TCS8 1911 aa14.82□□□□□ -0.04
UBR1-206ENST00000566493 SPDYE5A6NIY4 337 aa14.82□□□□□ -0.04
UBR1-206ENST00000566493 IPO8O15397 1037 aaKnown RBP14.82□□□□□ -0.04
UBR1-206ENST00000566493 ARHGEF6Q15052 776 aa14.82□□□□□ -0.04
UBR1-206ENST00000566493 TAF1CQ15572 869 aaPredicted RBP14.82□□□□□ -0.04
UBR1-206ENST00000566493 ERO1BQ86YB8 467 aa14.82□□□□□ -0.04
UBR1-206ENST00000566493 ZGPATQ8N5A5 531 aaKnown RBP14.82□□□□□ -0.04
UBR1-206ENST00000566493 FAM151AQ8WW52 585 aa14.82□□□□□ -0.04
UBR1-206ENST00000566493 BRI3BPQ8WY22 251 aa14.82□□□□□ -0.04
UBR1-206ENST00000566493 ZKSCAN4Q969J2 545 aaPredicted RBP14.82□□□□□ -0.04
UBR1-206ENST00000566493 MEIS3Q99687 375 aa14.82□□□□□ -0.04
UBR1-206ENST00000566493 ZNF341Q9BYN7 854 aa14.82□□□□□ -0.04
UBR1-206ENST00000566493 EFCC1Q9HA90 598 aa14.82□□□□□ -0.04
UBR1-206ENST00000566493 COPRSQ9NQ92 184 aa14.82□□□□□ -0.04
UBR1-206ENST00000566493 PA2G4Q9UQ80 394 aaKnown RBP14.82□□□□□ -0.04
UBR1-206ENST00000566493 CETPP11597 493 aa14.81□□□□□ -0.04
UBR1-206ENST00000566493 PRDX5P30044 214 aa14.81□□□□□ -0.04
UBR1-206ENST00000566493 PHKA1P46020 1223 aa14.81□□□□□ -0.04
UBR1-206ENST00000566493 FXR2P51116 673 aaKnown RBP eCLIP14.81□□□□□ -0.04
UBR1-206ENST00000566493 TCP10Q12799 353 aa14.81□□□□□ -0.04
UBR1-206ENST00000566493 DIXDC1Q155Q3 683 aa14.81□□□□□ -0.04
UBR1-206ENST00000566493 INTS3Q68E01 1043 aaKnown RBP14.81□□□□□ -0.04
UBR1-206ENST00000566493 MIGA2Q7L4E1 593 aa14.81□□□□□ -0.04
UBR1-206ENST00000566493 USP40Q9NVE5 1235 aa14.81□□□□□ -0.04
UBR1-206ENST00000566493 PTPN22Q9Y2R2 807 aa14.81□□□□□ -0.04
UBR1-206ENST00000566493 DAGLAQ9Y4D2 1042 aa14.81□□□□□ -0.04
UBR1-206ENST00000566493 SNCAIPQ9Y6H5 919 aa14.81□□□□□ -0.04
UBR1-206ENST00000566493 SALL1Q9NSC2 1324 aa14.81□□□□□ -0.04
UBR1-206ENST00000566493 RPAP1Q9BWH6 1393 aaPredicted RBP14.81□□□□□ -0.04
UBR1-206ENST00000566493 TNRC18O15417 2968 aaPredicted RBP14.81□□□□□ -0.04
UBR1-206ENST00000566493 SRGAP3O43295 1099 aa14.8□□□□□ -0.04
UBR1-206ENST00000566493 PPIL2Q13356 520 aa14.8□□□□□ -0.04
UBR1-206ENST00000566493 SNAPC2Q13487 334 aa14.8□□□□□ -0.04
UBR1-206ENST00000566493 CDC42EP5Q6NZY7 148 aa14.8□□□□□ -0.04
UBR1-206ENST00000566493 AKAP2Q9Y2D5 859 aa14.8□□□□□ -0.04
UBR1-206ENST00000566493 ADORA1P30542 326 aa14.79□□□□□ -0.04
UBR1-206ENST00000566493 CCDC102BQ68D86 513 aa14.79□□□□□ -0.04
UBR1-206ENST00000566493 SLF2Q8IX21 1173 aa14.79□□□□□ -0.04
UBR1-206ENST00000566493 FAM43AQ8N2R8 423 aa14.79□□□□□ -0.04
UBR1-206ENST00000566493 IRF6O14896 467 aa14.78□□□□□ -0.04
UBR1-206ENST00000566493 TIMM10P62072 90 aa14.78□□□□□ -0.04
UBR1-206ENST00000566493 PPATQ06203 517 aa14.78□□□□□ -0.04
UBR1-206ENST00000566493 SPTY2D1Q68D10 685 aaPredicted RBP14.78□□□□□ -0.04
UBR1-206ENST00000566493 DZIP1Q86YF9 867 aaKnown RBP14.78□□□□□ -0.04
UBR1-206ENST00000566493 FRAT1Q92837 279 aaPredicted RBP14.78□□□□□ -0.04
UBR1-206ENST00000566493 ZCCHC17Q9NP64 241 aaKnown RBP14.78□□□□□ -0.04
UBR1-206ENST00000566493 ABCF2Q9UG63 623 aa14.78□□□□□ -0.04
UBR1-206ENST00000566493 MYH2Q9UKX2 1941 aa14.77□□□□□ -0.04
UBR1-206ENST00000566493 TFCP2Q12800 502 aa14.77□□□□□ -0.05
UBR1-206ENST00000566493 NFIAQ12857 509 aa14.77□□□□□ -0.05
UBR1-206ENST00000566493 MVPQ14764 893 aaKnown RBP14.77□□□□□ -0.05
UBR1-206ENST00000566493 KIF22Q14807 665 aa14.77□□□□□ -0.05
UBR1-206ENST00000566493 GORABQ5T7V8 394 aa14.77□□□□□ -0.05
UBR1-206ENST00000566493 XAGE2Q96GT9 111 aa14.77□□□□□ -0.05
UBR1-206ENST00000566493 NEUROD6Q96NK8 337 aa14.77□□□□□ -0.05
UBR1-206ENST00000566493 A0A1B0GUL7 405 aa14.76□□□□□ -0.05
UBR1-206ENST00000566493 BTBD19C9JJ37 291 aa14.76□□□□□ -0.05
UBR1-206ENST00000566493 GNAI2P04899 355 aa14.76□□□□□ -0.05
UBR1-206ENST00000566493 INPP5BP32019 993 aa14.76□□□□□ -0.05
UBR1-206ENST00000566493 MTX1Q13505 466 aa14.76□□□□□ -0.05
UBR1-206ENST00000566493 ATF7IPQ6VMQ6 1270 aa14.76□□□□□ -0.05
UBR1-206ENST00000566493 FAM198AQ9UFP1 575 aa14.76□□□□□ -0.05
UBR1-206ENST00000566493 ZNF112Q9UJU3 913 aa14.76□□□□□ -0.05
UBR1-206ENST00000566493 PDS5AQ29RF7 1337 aaKnown RBP14.75□□□□□ -0.05
UBR1-206ENST00000566493 TLR2O60603 784 aa14.75□□□□□ -0.05
UBR1-206ENST00000566493 ENTPD3O75355 529 aa14.75□□□□□ -0.05
UBR1-206ENST00000566493 TRIM27P14373 513 aa14.75□□□□□ -0.05
UBR1-206ENST00000566493 G3BP1Q13283 466 aaKnown RBP eCLIP14.75□□□□□ -0.05
UBR1-206ENST00000566493 RASGRF1Q13972 1273 aa14.75□□□□□ -0.05
UBR1-206ENST00000566493 PRPF38BQ5VTL8 546 aaKnown RBP14.75□□□□□ -0.05
UBR1-206ENST00000566493 ERICH6Q7L0X2 663 aa14.75□□□□□ -0.05
UBR1-206ENST00000566493 NBPF11Q86T75 865 aa14.75□□□□□ -0.05
UBR1-206ENST00000566493 ZSCAN29Q8IWY8 852 aaPredicted RBP14.75□□□□□ -0.05
UBR1-206ENST00000566493 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.75□□□□□ -0.05
UBR1-206ENST00000566493 ARMC5Q96C12 935 aa14.75□□□□□ -0.05
UBR1-206ENST00000566493 GAKO14976 1311 aa14.74□□□□□ -0.05
UBR1-206ENST00000566493 BCAR3O75815 825 aa14.74□□□□□ -0.05
UBR1-206ENST00000566493 SLC34A2O95436 690 aa14.74□□□□□ -0.05
UBR1-206ENST00000566493 RGS3P49796 1198 aa14.74□□□□□ -0.05
UBR1-206ENST00000566493 SLC9C1Q4G0N8 1177 aa14.74□□□□□ -0.05
UBR1-206ENST00000566493 NOL9Q5SY16 702 aaKnown RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms