RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 PLA2G12BQ9BX93 195 aa24.9■■□□□ 1.58
SPSB3-208ENST00000566339 DNAI1Q9UI46 699 aa24.9■■□□□ 1.58
SPSB3-208ENST00000566339 HOOK1Q9UJC3 728 aaKnown RBP24.9■■□□□ 1.58
SPSB3-208ENST00000566339 BCL9LQ86UU0 1499 aa24.9■■□□□ 1.58
SPSB3-208ENST00000566339 FOXP2O15409 715 aa24.9■■□□□ 1.58
SPSB3-208ENST00000566339 OLFM4Q6UX06 510 aa24.9■■□□□ 1.58
SPSB3-208ENST00000566339 VSTM4Q8IW00 320 aa24.9■■□□□ 1.58
SPSB3-208ENST00000566339 MPHOSPH8Q99549 860 aa24.9■■□□□ 1.58
SPSB3-208ENST00000566339 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.9■■□□□ 1.582e-17■■■■■ 95.5
SPSB3-208ENST00000566339 POLR3DP05423 398 aaPredicted RBP24.89■■□□□ 1.57
SPSB3-208ENST00000566339 ANTXR2P58335 489 aa24.89■■□□□ 1.57
SPSB3-208ENST00000566339 TRDNQ13061 729 aa24.89■■□□□ 1.57
SPSB3-208ENST00000566339 TRIM28Q13263 835 aaKnown RBP24.89■■□□□ 1.57
SPSB3-208ENST00000566339 TTLL5Q6EMB2 1281 aa24.89■■□□□ 1.57
SPSB3-208ENST00000566339 STK36Q9NRP7 1315 aa24.88■■□□□ 1.57
SPSB3-208ENST00000566339 EFCAB8A8MWE9 144 aa24.88■■□□□ 1.57
SPSB3-208ENST00000566339 NBPF26B4DH59 902 aa24.88■■□□□ 1.57
SPSB3-208ENST00000566339 ARHGAP6O43182 974 aa24.88■■□□□ 1.57
SPSB3-208ENST00000566339 UBASH3AP57075 661 aa24.88■■□□□ 1.57
SPSB3-208ENST00000566339 CHRNA2Q15822 529 aa24.88■■□□□ 1.57
SPSB3-208ENST00000566339 LRRC24Q50LG9 513 aa24.88■■□□□ 1.57
SPSB3-208ENST00000566339 NBPF14Q5TI25 921 aa24.88■■□□□ 1.57
SPSB3-208ENST00000566339 RESP18Q5W5W9 173 aa24.88■■□□□ 1.57
SPSB3-208ENST00000566339 NBPF10Q6P3W6 841 aaKnown RBP24.88■■□□□ 1.57
SPSB3-208ENST00000566339 NBPF15Q8N660 670 aa24.88■■□□□ 1.57
SPSB3-208ENST00000566339 TMEM87BQ96K49 555 aa24.88■■□□□ 1.57
SPSB3-208ENST00000566339 A0A0G2JLW4 131 aa24.88■■□□□ 1.57
SPSB3-208ENST00000566339 CHST3Q7LGC8 479 aa24.88■■□□□ 1.57
SPSB3-208ENST00000566339 HSD3B7Q9H2F3 369 aa24.88■■□□□ 1.57
SPSB3-208ENST00000566339 ANGEL1Q9UNK9 670 aaKnown RBP24.88■■□□□ 1.57
SPSB3-208ENST00000566339 PCDH11XQ9BZA7 1347 aa24.87■■□□□ 1.57
SPSB3-208ENST00000566339 PCDH11YQ9BZA8 1340 aa24.87■■□□□ 1.57
SPSB3-208ENST00000566339 A0A087WWV3 80 aa24.87■■□□□ 1.57
SPSB3-208ENST00000566339 ERVV-2B6SEH9 535 aa24.87■■□□□ 1.57
SPSB3-208ENST00000566339 PTPAQ15257 358 aa24.87■■□□□ 1.57
SPSB3-208ENST00000566339 WASHC4Q2M389 1173 aa24.87■■□□□ 1.57
SPSB3-208ENST00000566339 CT47A1Q5JQC4 288 aaPredicted RBP24.87■■□□□ 1.57
SPSB3-208ENST00000566339 HOMER1Q86YM7 354 aa24.87■■□□□ 1.57
SPSB3-208ENST00000566339 UBXN4Q92575 508 aa24.87■■□□□ 1.57
SPSB3-208ENST00000566339 ISCA1Q9BUE6 129 aa24.87■■□□□ 1.57
SPSB3-208ENST00000566339 MYH7P12883 1935 aa24.86■■□□□ 1.57
SPSB3-208ENST00000566339 KIF28PB7ZC32 967 aa24.86■■□□□ 1.57
SPSB3-208ENST00000566339 PIP4K2AP48426 406 aaPredicted RBP24.86■■□□□ 1.57
SPSB3-208ENST00000566339 CCDC57Q2TAC2 916 aa24.86■■□□□ 1.57
SPSB3-208ENST00000566339 GORABQ5T7V8 394 aa24.86■■□□□ 1.57
SPSB3-208ENST00000566339 DACH1Q9UI36 760 aa24.86■■□□□ 1.57
SPSB3-208ENST00000566339 WDHD1O75717 1129 aaPredicted RBP24.85■■□□□ 1.57
SPSB3-208ENST00000566339 NKX1-1Q15270 411 aaPredicted RBP24.85■■□□□ 1.57
SPSB3-208ENST00000566339 TTF1Q15361 905 aaPredicted RBP24.85■■□□□ 1.57
SPSB3-208ENST00000566339 TRIM65Q6PJ69 517 aa24.85■■□□□ 1.57
SPSB3-208ENST00000566339 ERCC4Q92889 916 aaPredicted RBP24.85■■□□□ 1.57
SPSB3-208ENST00000566339 XAGE2Q96GT9 111 aa24.85■■□□□ 1.57
SPSB3-208ENST00000566339 ALG1Q9BT22 464 aa24.85■■□□□ 1.57
SPSB3-208ENST00000566339 BCL11BQ9C0K0 894 aaPredicted RBP24.85■■□□□ 1.57
SPSB3-208ENST00000566339 ZNF446Q9NWS9 450 aa24.85■■□□□ 1.57
SPSB3-208ENST00000566339 NID2Q14112 1375 aa24.85■■□□□ 1.57
SPSB3-208ENST00000566339 WDR17Q8IZU2 1322 aa24.85■■□□□ 1.57
SPSB3-208ENST00000566339 TOGARAM1Q9Y4F4 1720 aa24.85■■□□□ 1.57
SPSB3-208ENST00000566339 ZRANB2O95218 330 aaKnown RBP eCLIP24.85■■□□□ 1.57
SPSB3-208ENST00000566339 SERPINC1P01008 464 aa24.85■■□□□ 1.57
SPSB3-208ENST00000566339 TOP1P11387 765 aaKnown RBP24.85■■□□□ 1.57
SPSB3-208ENST00000566339 ERCC6LQ2NKX8 1250 aa24.85■■□□□ 1.57
SPSB3-208ENST00000566339 CCDC102BQ68D86 513 aa24.85■■□□□ 1.57
SPSB3-208ENST00000566339 OTUD7BQ6GQQ9 843 aa24.85■■□□□ 1.57
SPSB3-208ENST00000566339 SLIT2O94813 1529 aa24.84■■□□□ 1.57
SPSB3-208ENST00000566339 MROH7-TTC4A0A0A0MT08 1334 aa24.84■■□□□ 1.57
SPSB3-208ENST00000566339 SH2B2O14492 632 aaPredicted RBP24.84■■□□□ 1.57
SPSB3-208ENST00000566339 LMOD1P29536 600 aaPredicted RBP24.84■■□□□ 1.57
SPSB3-208ENST00000566339 CLCN6P51797 869 aa24.84■■□□□ 1.57
SPSB3-208ENST00000566339 FKBP4Q02790 459 aaKnown RBP eCLIP24.84■■□□□ 1.57
SPSB3-208ENST00000566339 TMCO3Q6UWJ1 677 aa24.84■■□□□ 1.57
SPSB3-208ENST00000566339 VPS37DQ86XT2 251 aa24.84■■□□□ 1.57
SPSB3-208ENST00000566339 REXO1L1PQ8IX06 675 aa24.84■■□□□ 1.57
SPSB3-208ENST00000566339 TRIML1Q8N9V2 468 aa24.84■■□□□ 1.57
SPSB3-208ENST00000566339 MNS1Q8NEH6 495 aa24.84■■□□□ 1.57
SPSB3-208ENST00000566339 WASF1Q92558 559 aa24.84■■□□□ 1.57
SPSB3-208ENST00000566339 MAP3K14Q99558 947 aa24.84■■□□□ 1.57
SPSB3-208ENST00000566339 COL5A2P05997 1499 aaPredicted RBP24.84■■□□□ 1.57
SPSB3-208ENST00000566339 METAP2P50579 478 aaKnown RBP eCLIP24.83■■□□□ 1.57
SPSB3-208ENST00000566339 FHOD1Q9Y613 1164 aa24.83■■□□□ 1.57
SPSB3-208ENST00000566339 BIN1O00499 593 aa24.82■■□□□ 1.56
SPSB3-208ENST00000566339 GPAA1O43292 621 aa24.82■■□□□ 1.56
SPSB3-208ENST00000566339 STX10O60499 249 aa24.82■■□□□ 1.56
SPSB3-208ENST00000566339 TADA3O75528 432 aa24.82■■□□□ 1.56
SPSB3-208ENST00000566339 TBX2Q13207 712 aaPredicted RBP24.82■■□□□ 1.56
SPSB3-208ENST00000566339 TRIM29Q14134 588 aa24.82■■□□□ 1.56
SPSB3-208ENST00000566339 ARHGAP29Q52LW3 1261 aa24.82■■□□□ 1.56
SPSB3-208ENST00000566339 KRT40Q6A162 431 aa24.82■■□□□ 1.56
SPSB3-208ENST00000566339 SHC4Q6S5L8 630 aa24.82■■□□□ 1.56
SPSB3-208ENST00000566339 KRBA2Q6ZNG9 492 aa24.82■■□□□ 1.56
SPSB3-208ENST00000566339 SGMS1Q86VZ5 419 aa24.82■■□□□ 1.56
SPSB3-208ENST00000566339 GPHNQ9NQX3 736 aaPredicted RBP24.82■■□□□ 1.56
SPSB3-208ENST00000566339 CALCOCO1Q9P1Z2 691 aa24.82■■□□□ 1.56
SPSB3-208ENST00000566339 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.82■■□□□ 1.56
SPSB3-208ENST00000566339 V9GYY5 206 aaPredicted RBP24.82■■□□□ 1.56
SPSB3-208ENST00000566339 UBE3CQ15386 1083 aa24.82■■□□□ 1.56
SPSB3-208ENST00000566339 ALX1Q15699 326 aa24.82■■□□□ 1.56
SPSB3-208ENST00000566339 TTLL7Q6ZT98 887 aa24.82■■□□□ 1.56
SPSB3-208ENST00000566339 PCCAP05165 728 aaPredicted RBP24.81■■□□□ 1.56
SPSB3-208ENST00000566339 CSF1RP07333 972 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms